tRNA Gene Summary

Overview
tRNAs decoding standard 20 AA 189
Selenocysteine tRNAs (TCA) 0
Possible suppressor tRNAs (CTA,TTA,TCA) 0
tRNAs with undetermined or unknown isotypes 0
Predicted pseudogenes 0
Total tRNAs 189
Intron Summary (tRNAs with introns: 86)
Ala CGC
2
Gly CCC
1
Gly TCC
3
Pro AGG
7
Pro CGG
1
Pro TGG
2
Thr AGT
3
Thr CGT
2
Thr TGT
3
Val AAC
7
Val CAC
3
Val TAC
1
Ser GCT
5
Arg TCG
2
Arg CCT
1
Arg TCT
1
Leu AAG
5
Leu CAG
2
Leu TAG
1
Leu CAA
2
Asp GTC
8
Glu TTC
1
His GTG
7
Gln TTG
4
Ile GAT
1
Ile TAT
1
Met CAT
4
Tyr GTA
6
 

The codon usage of this genome was generated from protein-coding genes annotated in GenBank or RefSeq.
Number of CDS: 0
Number of Codons: 3115

Four Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
Codon Usage (Percentage)
AlaAGC
8
GGC
 
CGC
2
TGC
3
13
GCT
0
GCC
0
GCG
0
GCA
0
0%
GlyACC
 
GCC
12
CCC
1
TCC
3
16
GGT
0
GGC
0
GGG
0
GGA
0
0%
ProAGG
7
GGG
 
CGG
1
TGG
2
10
CCT
0
CCC
0
CCG
0
CCA
0
0%
ThrAGT
8
GGT
 
CGT
2
TGT
3
13
ACT
0
ACC
0
ACG
0
ACA
0
0%
ValAAC
7
GAC
 
CAC
3
TAC
1
11
GTT
0
GTC
0
GTG
0
GTA
0
0%
Six Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
Codon Usage (Percentage)
SerAGA
6
GGA
 
CGA
2
TGA
 
ACT
 
GCT
5
 
 
 
 
13
TCT
0
TCC
0
TCG
0
TCA
0
AGT
0
AGC
0
 
 
 
 
0%
ArgACG
10
GCG
 
CCG
2
TCG
2
 
 
 
 
CCT
1
TCT
1
16
CGT
0
CGC
0
CGG
0
CGA
0
 
 
 
 
AGG
0
AGA
0
0%
LeuAAG
5
GAG
 
CAG
2
TAG
1
 
 
 
 
CAA
2
TAA
 
10
CTT
0
CTC
0
CTG
0
CTA
0
 
 
 
 
TTG
0
TTA
0
0%
Two Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
Codon Usage (Percentage)
PheAAA
 
GAA
5
 
 
 
 
5
TTT
0
TTC
0
 
 
 
 
0%
AsnATT
 
GTT
6
 
 
 
 
6
AAT
0
AAC
0
 
 
 
 
0%
Lys 
 
 
 
CTT
9
TTT
 
9
 
 
 
 
AAG
0
AAA
0
0%
AspATC
 
GTC
8
 
 
 
 
8
GAT
0
GAC
0
 
 
 
 
0%
Glu 
 
 
 
CTC
10
TTC
3
13
 
 
 
 
GAG
0
GAA
0
0%
HisATG
 
GTG
7
 
 
 
 
7
CAT
0
CAC
0
 
 
 
 
0%
Gln 
 
 
 
CTG
5
TTG
4
9
 
 
 
 
CAG
0
CAA
0
0%
Two Box and Other tRNA Sets
IsotypetRNA Count by AnticodonTotal
Codon Usage (Percentage)
IleAAT
9
GAT
1
 
 
TAT
1
11
ATT
0
ATC
0
 
 
ATA
0
0%
iMet/Met 
 
 
 
CAT
4/4
 
 
8
 
 
 
 
ATG
0
 
 
0%
TyrATA
 
GTA
6
 
 
 
 
6
TAT
0
TAC
0
 
 
 
 
0%
Supres 
 
TCA
 
CTA
 
TTA
 
0
Stop 
 
TGA
0
TAG
0
TAA
0
0%
CysACA
 
GCA
2
 
 
 
 
2
TGT
0
TGC
0
 
 
 
 
0%
Trp 
 
 
 
CCA
3
 
 
3
 
 
 
 
TGG
0
 
 
0%
SelCys 
 
 
 
 
 
TCA
 
0
 
 
 
 
 
 
 
 
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