tRNA Gene Summary

Overview
tRNAs decoding standard 20 AA 179
Selenocysteine tRNAs (TCA) 0
Possible suppressor tRNAs (CTA,TTA,TCA) 0
tRNAs with undetermined or unknown isotypes 0
Predicted pseudogenes 5
Total tRNAs 184
Intron Summary (tRNAs with introns: 67)
Ala CGC
2
Gly CCC
1
Gly TCC
3
Pro AGG
4
Pro CGG
2
Pro TGG
1
Thr CGT
1
Thr TGT
1
Val CAC
3
Ser CGA
2
Ser TGA
2
Ser GCT
2
Arg CCT
1
Leu AAG
6
Leu CAG
4
Leu TAG
1
Leu CAA
2
Leu TAA
1
Phe GAA
5
Lys TTT
1
Asp GTC
9
Gln TTG
2
Ile TAT
1
Met CAT
4
Tyr GTA
6
 

The codon usage of this genome was generated from protein-coding genes annotated in GenBank or RefSeq.
Number of CDS: 0
Number of Codons: 1427

Four Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
Codon Usage (Percentage)
AlaAGC
8
GGC
 
CGC
2
TGC
3
13
GCT
0
GCC
0
GCG
0
GCA
0
0%
GlyACC
 
GCC
9
CCC
1
TCC
3
13
GGT
0
GGC
0
GGG
0
GGA
0
0%
ProAGG
4
GGG
 
CGG
2
TGG
1
7
CCT
0
CCC
0
CCG
0
CCA
0
0%
ThrAGT
6
GGT
 
CGT
1
TGT
1
8
ACT
0
ACC
0
ACG
0
ACA
0
0%
ValAAC
9
GAC
 
CAC
3
TAC
2
14
GTT
0
GTC
0
GTG
0
GTA
0
0%
Six Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
Codon Usage (Percentage)
SerAGA
6
GGA
 
CGA
2
TGA
3
ACT
 
GCT
4
 
 
 
 
15
TCT
0
TCC
0
TCG
0
TCA
0
AGT
0
AGC
0
 
 
 
 
0%
ArgACG
7
GCG
 
CCG
2
TCG
2
 
 
 
 
CCT
1
TCT
2
14
CGT
0
CGC
0
CGG
0
CGA
0
 
 
 
 
AGG
0
AGA
0
0%
LeuAAG
6
GAG
 
CAG
4
TAG
1
 
 
 
 
CAA
2
TAA
1
14
CTT
0
CTC
0
CTG
0
CTA
0
 
 
 
 
TTG
0
TTA
0
0%
Two Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
Codon Usage (Percentage)
PheAAA
 
GAA
6
 
 
 
 
6
TTT
0
TTC
0
 
 
 
 
0%
AsnATT
 
GTT
6
 
 
 
 
6
AAT
0
AAC
0
 
 
 
 
0%
Lys 
 
 
 
CTT
6
TTT
2
8
 
 
 
 
AAG
0
AAA
0
0%
AspATC
 
GTC
10
 
 
 
 
10
GAT
0
GAC
0
 
 
 
 
0%
Glu 
 
 
 
CTC
8
TTC
4
12
 
 
 
 
GAG
0
GAA
0
0%
HisATG
 
GTG
5
 
 
 
 
5
CAT
0
CAC
0
 
 
 
 
0%
Gln 
 
 
 
CTG
5
TTG
2
7
 
 
 
 
CAG
0
CAA
0
0%
Two Box and Other tRNA Sets
IsotypetRNA Count by AnticodonTotal
Codon Usage (Percentage)
IleAAT
7
GAT
1
 
 
TAT
1
9
ATT
0
ATC
0
 
 
ATA
0
0%
iMet/Met 
 
 
 
CAT
4/6
 
 
10
 
 
 
 
ATG
0
 
 
0%
TyrATA
 
GTA
7
 
 
 
 
7
TAT
0
TAC
0
 
 
 
 
0%
Supres 
 
TCA
 
CTA
 
TTA
 
0
Stop 
 
TGA
0
TAG
0
TAA
0
0%
CysACA
 
GCA
3
 
 
 
 
3
TGT
0
TGC
0
 
 
 
 
0%
Trp 
 
 
 
CCA
3
 
 
3
 
 
 
 
TGG
0
 
 
0%
SelCys 
 
 
 
 
 
TCA
 
0
 
 
 
 
 
 
 
 
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