Structurally Aligned tRNAs (by Isotype & Anticodon)

Structural alignments are generated by aligning tRNA sequences against domain-specific tRNA covariance models with the use of COVE.

Ala tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<. GGGCGACTAGCTCAAGTGGTA.GAGCGCTCGCTTAGCATGCGAGAG...........GtACGGGGATCGATACCCCGGTCGTCCA tRNA-Ala-AGC-1-1 Sc: 61.0 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<. GGGCTAGTAGTGTAGT.GGTA.TCACGTTCGCTTCGCATGCGAAAG...........TtCCCGGGTTCGATTCCCGGCTGGTCCA tRNA-Ala-CGC-1-1 Sc: 73.6 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<. GGGCAGGTGGTGTAGT.GGTA.TCACGCTTGATTTGCATTCAAGAG...........GtCCGGGGTTCAATTCCCCGTCTGTCCA tRNA-Ala-TGC-1-1 Sc: 78.1
Arg tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<. GGGCCGGTAGTTCAGTTGGAtA.GAATGCCCGACTACGGATCGGGAG...........GtCGTGGGTTCGACTCCTGCCCGGCCTA tRNA-Arg-ACG-1-1 Sc: 69.1 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<. GACGGCGTAGCCTAAT.GGAtA.AGGCGTCGGTCTTCGGAACCGAAG...........AtTGCGGGTTCGAGTCCCGTCGTCGTTA tRNA-Arg-TCG-1-1 Sc: 65.0 >>>>>>>..>>>>..........<<<<..>>>>.......<<<<.................>>>>>.......<<<<<<<<<<<<. GCACCAGTGGCGTAATTGGAtA.GCGCAATGCCTTCCTAAGGCAAAG...........GtTATGGGTTCGAGTCCCATCTGGTGTA tRNA-Arg-CCT-1-1 Sc: 58.9 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<. GCCTCTGTGGCGCAATTGGAtA.GCGCGTTGGACTTCTAATCCAAAG...........GcTGCGGGTTCGAATCCCGCCAGGGGTA tRNA-Arg-TCT-1-1 Sc: 84.4
Asn tRNAs
>>>.>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<.<<<. GGTTCCGTAGCTCAGTTGGTtAGAGCGTGCGGCTGTTAACCGCAAG...........GtCGTTGGTTCGATCCCAGCCGGTACCG tRNA-Asn-GTT-1-1 Sc: 78.9
Asp tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<. TCCGAGATAGTATAGTGGCaA.GTATTTCCGCCTGTCACGCGGAAG...........ACCCGGGTTCAATTCCCGGTCTCGGAG tRNA-Asp-GTC-1-1 Sc: 68.3
Cys tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<. GGGCGTGTAGCTCAGCGGTA.GAGCAGCTGACTGCAGATCAGCGG...........GtCCATGGTTCAAATCCGTGCGCGCCCT tRNA-Cys-GCA-1-1 Sc: 71.0
Glu tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<. TCCCACGTGGTCTAGT.GGCtA.GGATATTCGGCTCTCACCCGAAAG...........GCCCGGGTTCAATTCCCGGCGTGGGAA tRNA-Glu-CTC-1-1 Sc: 77.0 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<. TCCCATGTAGTCTAGGCGGTtA.GGATATTCGGCTTTCACCCGAACG...........ACCCGGGTTCGAGTCCCGGCGTGGGAA tRNA-Glu-TTC-1-1 Sc: 69.6
Gln tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<. GGTTCTGTAGTGTAGTGGTtA.GCACTGCAGACTCTGACTCTGCAA...........ACCTGGGTTCAAATCCCAGCAGAACCT tRNA-Gln-CTG-1-1 Sc: 70.6 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<. GGTTTCGTAGTGTAGTGGTtA.GCACTGAGGACTTTGAATCCTCCA...........ACCCGGGTTCGAGTCCCGGCGAGACCT tRNA-Gln-TTG-1-1 Sc: 69.1
Gly tRNAs
>>>>>>>..>>.>.........<.<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<. GCATCTGTGGTCTAGTGGT.A.GAATACTTCGTTGCCATCGAAGTG...........ACCCGGGTTCGATTCCCGGCAGATGCA tRNA-Gly-GCC-1-1 Sc: 67.8 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<. GCGTCAATAGTCTAACGGCcA.TGATACCTGCCTTCCAAGCAGGTG...........ACCCGGGTTCGACTCCCGGTTGACGCA tRNA-Gly-TCC-1-1 Sc: 67.5
His tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<. GTCCAAATCGTCTAGTGGTtA.GGACTCCACGCTGTGGACGTGGCA...........ACGTAGGTTCGAATCCTGCTTTGGACA tRNA-His-GTG-1-1 Sc: 62.0
Ile tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<. GGTCCTATAGCTCAGTTGGTtA.GAGCGTACGGCTAATAACCGTAAG...........GtCGGCGGTTCGAGACCGCCTGGGACCA tRNA-Ile-AAT-1-1 Sc: 81.9 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<. GATCCATTAGCTCAGT.GGTtA.GAGCGTCGGTCTTATGTACCGAAG...........GtCGTGGGTTCGAAACCCACATGGATCA tRNA-Ile-TAT-1-1 Sc: 80.9
Leu tRNAs
>>>>>>>..>>>............<<<.>>>>>.......<<<<<.>>..............<<..>>>>>.......<<<<<.<<<<<<<. GACAGAATGGCCGAGTGGTctA.AGGCGCAACGTTAAGGCCGTTGTCCGA..........AAGGGCGTGGGTTCGAACCCCAC.TTCTGTCA tRNA-Leu-AAG-1-1 Sc: 66.6 >>>>>>>..>>>............<<<.>>>>>.......<<<<<.>>..............<<..>>>>>.......<<<<<.<<<<<<<. GACAGAATGGCCGAGCGGTctA.AGGCGCTACAGTCAGATTGTAGTCTG.TAT........AAGGCGTGGGTTCGAATCCCGC.TTCTGTCA tRNA-Leu-CAG-1-1 Sc: 61.2 >>>>>>>..>>>............<<<.>>>>>.......<<<<<.>>.>..........<.<<..>>>>>.......<<<<<.<<<<<<<. GTCAGGATGGCCGAGTGGTctA.AGGCGCAGCGTTTAGGCCGCTGTCCGT..........AAGGGCGTGGGTTCGAACCCCAC.TCCTGACA tRNA-Leu-TAG-1-1 Sc: 71.3 >>>>>>>..>>>............<<<.>>>>>.......<<<<<.>>>>..........<<<<..>>>>>.......<<<<<.<<<<<<<. GCACGGATGGCTGAGTGGTctA.AAGCGTCAGACTCAAGATCTGATGAACGTAA......GTTCGCATGGGTTCGAACCCCAT.TTCGTGCA tRNA-Leu-CAA-1-1 Sc: 82.4 >>>>>>>..>>>............<<<.>.>>>.......<<<.<.>>>>..........<<<<..>>>>>.......<<<<<.<<<<<<<. GCACGGGTGCCCGAGTGGTt.A.AGGGGGTGGACTTAAGATCCTCTGGTCACTA......GACCGCGTGGGTTCGAACCCCAC.CTCGTGCA tRNA-Leu-TAA-1-1 Sc: 73.6
Lys tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<. GCTGCCTTAGCTCAGTCGGTAGAGCGCCAGACTCTTAATCTGGTG...........GtCAGGGGTTCGAGCCCCCTAGGCAGCT tRNA-Lys-CTT-1-1 Sc: 87.0 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<. GCCTCTTTAGCTCAGTTGGTAGAGCGCCAGACTTTTAATCTGGTG...........GtCAGGGGTTCGAGTCCCCTAGGAGGCT tRNA-Lys-TTT-1-1 Sc: 87.0
Met tRNAs
>>>>>>>..>>>>.........<<<<.>>>>.........<<<<................>>>>>.......<<<<<<<<<<<<. GGGTAATTGGCGCAGTTGGTtAGCGCGCGGGTCTCATAATCCCGAG...........GtCGTGAGTTCGATCCTCACATTACCCA tRNA-Met-CAT-1-1 Sc: 80.4
iMet tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<. AGCAGCGTAGCTCAGAGGAA.GAGTGGGGGGCTCATAACCCCCAG...........GaCCGTGGATCGAAACCACGCGCTGCTA tRNA-iMet-CAT-1-1 Sc: 58.4
Phe tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>.>>.......<<.<<<<<<<<<. GCCGTGATAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAG...........GtCCCTGGTTCGATCCCTGGTCACGGCA tRNA-Phe-GAA-1-1 Sc: 86.0
Pro tRNAs
>>>>>>>..>>>..........<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<. GGCTACTTAGTCTAGTGGTA.TGATTCTCTCTTAGGGTGGGAGAG...........GtCCCGGGTTCGATTCCCGGAGTAGCCC tRNA-Pro-AGG-1-1 Sc: 70.0 >>>>>>>..>>>..........<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<. GGCTACTTGATCTAGTGGTA.TGATTCTTGCTTCGGGTGCAAGAC...........GtCCCGGGTTCGATTCCCGGAGTAGCCC tRNA-Pro-CGG-1-1 Sc: 68.5 >>>>>>>..>>>..........<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<. GGCTACTTAGTCTAGTGGTA.TGATTCTCGCTTTGGGTGCGAGAG...........GtCCCGGGTTCAATTCCCGGAGTAGCCC tRNA-Pro-TGG-1-1 Sc: 73.2
Ser tRNAs
>>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>.......<<<<..>>>>>.......<<<<<.<<<<<<<. GACAGTGTGTCCGAGTGGTtA.AGGAGTCAGACTAGAAATCTGGTAGGCTTT....GCCTGCGCAGGTTCGAATCCTGC.CGCTGTCG tRNA-Ser-AGA-1-1 Sc: 79.5 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>.......<<<<..>>>>>.......<<<<<.<<<<<<<. GACAGTTTGTCCGAGTGGTtA.AGGAGGTTGACTCGAAATCAACTGGGCTCT....GCCCGCACAGGTTCAAATCCTGT.AGCTGTCG tRNA-Ser-CGA-1-1 Sc: 73.5 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>.......<<<<..>>>>>.......<<<<<.<<<<<<<. GACAGTTTGCCCGAGTGGTtA.AGGGGTTGGACTTGAAATCCAATGAGCTTT....GCTTGCGCAGGTTCGAATCCTGC.AGCTGTCG tRNA-Ser-TGA-1-1 Sc: 76.7 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>.......<<<<..>>>>>.......<<<<<.<<<<<<<. GATAACGTGCCCGAGTGGTtA.AGGGGTTGGACTGCTAATCCAATGGGTTCT....GCCCGCGCAGGTTCGATTCCTGC.CGTTGTCG tRNA-Ser-GCT-1-1 Sc: 78.6
Thr tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<. GCCTGCATAGCTTAGTTGGTA.GAGCATCCGCCTAGTAAGCGGAAG...........GtCATCGGTTCGACTCCGGTTGTAGGCT tRNA-Thr-AGT-1-1 Sc: 78.5 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<. GCCATCTTAGCACAGTTGGTA.ATGCGTTTGATTCGTAATCAAAAG...........AtCGTGGGTTCGACTCCCACAGGTGGCT tRNA-Thr-CGT-1-1 Sc: 74.8 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<. GCCACCTTAGCACAGT.GGTA.GTGCGTTGGTCTTGTAAACCAAAG...........GtCGGGAGTTCGATCCTCCCAGGTGGCT tRNA-Thr-TGT-1-1 Sc: 81.2
Trp tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<. GGGCCTATGGCGCAACGGTA.GCGCGTCTGACTCCAGATCAGAAG...........GcTGGGGGTTCGAATCCCTCTGGGCTCA tRNA-Trp-CCA-1-1 Sc: 75.3
Tyr tRNAs
>>>>>>>..>>>>........<<<<.>>>>>..................<<<<<................>>>>>.......<<<<<<<<<<<<. CCGATGATAGCTCAGTTGGTAGAGCGGCAGACTGTAGttgaaatggttATCTGTTG...........GtCACCGGTTCGATTCCGGTTCATCGGA tRNA-Tyr-GTA-1-1 Sc: 74.2
Val tRNAs
>>>>>>>..>>>...........<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<. GCGGGCATGGTCTAGTGGCtA.TGACGCCTGCCTAACACGCAGGAG...........AtCCCGAGTTCGATCCTCGGTGCCCGTA tRNA-Val-AAC-1-1 Sc: 71.5 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<. GCGAGCATGGTCTAGTGGCtA.TGACGTTCGCCTCACACGCGAAAG...........AtCCCGAGTTCGATCCTCGGTGCTCGTA tRNA-Val-CAC-1-1 Sc: 70.3 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<. GCGGGCATGGTCTAGTGGCtA.TGACGCCTGCCTTACACGCAGGAG...........AtCCCGAGTTCGATCCTCGGTGCCCGTA tRNA-Val-TAC-1-1 Sc: 71.5
SeC tRNAs
>>>>>>>.>..>>>>>>....<<<<<<>.>>>>.......<<<<.<......>>......<<...>>>>.......<<<<<.<<<<<<<. GCACCGATGAGTTAGCATGGTTGCTAAGTATGACTTCAAATCATTTggcGTAGTTTTTCTGCGCAGAGGTTCGATTCCTCCTTCGGTGCg tRNA-SeC-TCA-1-1 Sc: 108.1
Sup tRNAs