tRNA Gene Summary

Overview
High scoring set 1021
tRNAs decoding standard 20 AA 1019
Selenocysteine tRNAs (TCA) 2
Notable atypical predictions  
Anticodon/isotype mismatch 1252
Unexpected anticodons 1
Non-canonical anticodon loop length 1
Other tRNA-like predictions  
Primary filter (tRNAscan-SE pseudogenes) 228
Secondary filter (low feature scores, possible rep. element) 250

Note: tRNA predictions in mitochondria and nuclear mitochondrial sequences (NUMTs) are not included in the current version of the database.

Intron Summary (tRNAs with introns: 11)
Gly GCC
1
Val CAC
1
Leu CAG
1
Leu CAA
8
Four Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
AlaAGC
47
GGC
 
CGC
12
TGC
14
73
GlyACC
 
GCC
35
CCC
1
TCC
44
80
ProAGG
35
GGG
 
CGG
12
TGG
14
61
ThrAGT
34
GGT
 
CGT
16
TGT
11
61
ValAAC
27
GAC
 
CAC
16
TAC
8
51
Six Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
SerAGA
23
GGA
 
CGA
13
TGA
9
ACT
 
GCT
11
 
 
 
 
56
ArgACG
38
GCG
 
CCG
1
TCG
12
 
 
 
 
CCT
5
TCT
12
68
LeuAAG
34
GAG
 
CAG
17
TAG
5
 
 
 
 
CAA
8
TAA
3
67
Two Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
PheAAA
 
GAA
21
 
 
 
 
21
AsnATT
 
GTT
33
 
 
 
 
33
Lys 
 
 
 
CTT
58
TTT
26
84
AspATC
 
GTC
47
 
 
 
 
47
Glu 
 
 
 
CTC
50
TTC
31
81
HisATG
 
GTG
37
 
 
 
 
37
Gln 
 
 
 
CTG
26
TTG
13
39
Two Box and Other tRNA Sets
IsotypetRNA Count by AnticodonTotal
IleAAT
32
GAT
 
CAT
 
TAT
7
39
iMet/Met 
 
 
 
CAT
17/19
 
 
36
TyrATA
 
GTA
29
 
 
 
 
29
Supres 
 
TCA
 
CTA
 
TTA
 
0
CysACA
 
GCA
34
 
 
 
 
34
Trp 
 
 
 
CCA
22
 
 
22
SelCys 
 
 
 
 
 
TCA
2
2