tRNA Gene Summary

Overview
High scoring set 1021
tRNAs decoding standard 20 AA 1019
Selenocysteine tRNAs (TCA) 2
Notable atypical predictions  
Anticodon/isotype mismatch 1252
Unexpected anticodons 1
Non-canonical anticodon loop length 1
Other tRNA-like predictions  
Primary filter (tRNAscan-SE pseudogenes) 228
Secondary filter (low feature scores, possible rep. element) 250

Note: tRNA predictions in mitochondria and nuclear mitochondrial sequences (NUMTs) are not included in the current version of the database.

Intron Summary (tRNAs with introns: 19)
Ala AGC
1
Gly GCC
1
Val CAC
1
Val TAC
1
Arg GCG
1
Leu CAG
1
Leu CAA
8
Asn ATT
1
Lys TTT
1
Tyr ATA
1
Supres CTA
1
Cys ACA
1
Four Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
AlaAGC
55
GGC
2
CGC
15
TGC
16
88
GlyACC
11
GCC
40
CCC
3
TCC
49
103
ProAGG
36
GGG
1
CGG
14
TGG
22
73
ThrAGT
35
GGT
90
CGT
21
TGT
11
157
ValAAC
28
GAC
2
CAC
19
TAC
10
59
Six Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
SerAGA
23
GGA
1
CGA
31
TGA
17
ACT
3
GCT
17
 
 
 
 
92
ArgACG
191
GCG
9
CCG
2
TCG
13
 
 
 
 
CCT
6
TCT
15
236
LeuAAG
35
GAG
 
CAG
17
TAG
5
 
 
 
 
CAA
10
TAA
3
70
Two Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
PheAAA
 
GAA
24
 
 
 
 
24
AsnATT
16
GTT
37
 
 
 
 
53
Lys 
 
 
 
CTT
61
TTT
1272
1333
AspATC
 
GTC
50
 
 
 
 
50
Glu 
 
 
 
CTC
52
TTC
34
86
HisATG
 
GTG
41
 
 
 
 
41
Gln 
 
 
 
CTG
27
TTG
13
40
Two Box and Other tRNA Sets
IsotypetRNA Count by AnticodonTotal
IleAAT
35
GAT
6
CAT
 
TAT
17
58
iMet/Met 
 
 
 
CAT
19/23
 
 
42
TyrATA
4
GTA
30
 
 
 
 
34
Supres 
 
TCA
4
CTA
4
TTA
3
11
CysACA
2
GCA
37
 
 
 
 
39
Trp 
 
 
 
CCA
22
 
 
22
SelCys 
 
 
 
 
 
TCA
2
2