tRNA Gene Summary

Overview
tRNAs decoding standard 20 AA 104
Selenocysteine tRNAs (TCA) 0
Possible suppressor tRNAs (CTA,TTA,TCA) 2
tRNAs with undetermined or unknown isotypes 0
Predicted pseudogenes 3
Total tRNAs 109
Intron Summary (tRNAs with introns: 96)
Ala AGC
5
Ala CGC
2
Ala TGC
1
Gly GCC
4
Gly CCC
1
Gly TCC
2
Pro AGG
3
Pro CGG
1
Pro TGG
1
Thr CGT
1
Thr TGT
1
Val AAC
4
Val TAC
1
Ser AGA
3
Ser CGA
3
Ser TGA
1
Ser GCT
2
Arg ACG
4
Arg TCG
3
Arg CCT
1
Arg TCT
1
Leu AAG
4
Leu CAG
2
Leu TAG
1
Leu TAA
2
Phe GAA
4
Asn GTT
3
Lys CTT
5
Lys TTT
1
Asp GTC
5
Glu CTC
1
Glu TTC
1
Gln CTG
4
Gln TTG
2
Ile AAT
4
Ile TAT
1
Met CAT
4
Tyr GTA
2
Supres TCA
2
Cys GCA
2
Trp CCA
1
 

The codon usage of this genome was generated from protein-coding genes annotated in GenBank or RefSeq.
Number of CDS: 0
Number of Codons: 1493

Four Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
Codon Usage (Percentage)
AlaAGC
5
GGC
 
CGC
2
TGC
1
8
GCT
0
GCC
0
GCG
0
GCA
0
0%
GlyACC
 
GCC
4
CCC
1
TCC
2
7
GGT
0
GGC
0
GGG
0
GGA
0
0%
ProAGG
3
GGG
 
CGG
1
TGG
1
5
CCT
0
CCC
0
CCG
0
CCA
0
0%
ThrAGT
4
GGT
 
CGT
1
TGT
1
6
ACT
0
ACC
0
ACG
0
ACA
0
0%
ValAAC
4
GAC
 
CAC
1
TAC
1
6
GTT
0
GTC
0
GTG
0
GTA
0
0%
Six Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
Codon Usage (Percentage)
SerAGA
3
GGA
 
CGA
3
TGA
1
ACT
 
GCT
2
 
 
 
 
9
TCT
0
TCC
0
TCG
0
TCA
0
AGT
0
AGC
0
 
 
 
 
0%
ArgACG
4
GCG
 
CCG
 
TCG
3
 
 
 
 
CCT
1
TCT
1
9
CGT
0
CGC
0
CGG
0
CGA
0
 
 
 
 
AGG
0
AGA
0
0%
LeuAAG
4
GAG
 
CAG
2
TAG
1
 
 
 
 
CAA
 
TAA
2
9
CTT
0
CTC
0
CTG
0
CTA
0
 
 
 
 
TTG
0
TTA
0
0%
Two Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
Codon Usage (Percentage)
PheAAA
 
GAA
4
 
 
 
 
4
TTT
0
TTC
0
 
 
 
 
0%
AsnATT
 
GTT
6
 
 
 
 
6
AAT
0
AAC
0
 
 
 
 
0%
Lys 
 
 
 
CTT
5
TTT
1
6
 
 
 
 
AAG
0
AAA
0
0%
AspATC
 
GTC
5
 
 
 
 
5
GAT
0
GAC
0
 
 
 
 
0%
Glu 
 
 
 
CTC
5
TTC
2
7
 
 
 
 
GAG
0
GAA
0
0%
HisATG
 
GTG
 
 
 
 
 
0
CAT
0
CAC
0
 
 
 
 
0%
Gln 
 
 
 
CTG
4
TTG
2
6
 
 
 
 
CAG
0
CAA
0
0%
Two Box and Other tRNA Sets
IsotypetRNA Count by AnticodonTotal
Codon Usage (Percentage)
IleAAT
4
GAT
 
 
 
TAT
1
5
ATT
0
ATC
0
 
 
ATA
0
0%
iMet/Met 
 
 
 
CAT
-/4
 
 
0
 
 
 
 
ATG
0
 
 
0%
TyrATA
 
GTA
2
 
 
 
 
2
TAT
0
TAC
0
 
 
 
 
0%
Supres 
 
TCA
2
CTA
 
TTA
 
2
Stop 
 
TGA
0
TAG
0
TAA
0
0%
CysACA
 
GCA
2
 
 
 
 
2
TGT
0
TGC
0
 
 
 
 
0%
Trp 
 
 
 
CCA
1
 
 
1
 
 
 
 
TGG
0
 
 
0%
SelCys 
 
 
 
 
 
TCA
 
0
 
 
 
 
 
 
 
 
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