Structurally Aligned tRNAs (by Isotype & Anticodon)

Structural alignments are generated by aligning tRNA sequences against domain-specific tRNA covariance models with the use of COVE.

Ala tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.........................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGGGGTTTAGCTCAGTTGGT.A.GAGCGTTCGCTTAGCAccatgtctaaat......................TGCGAAAG...........GtCGCGTGTTCGACTCATGCAGTCTCCA tRNA-Ala-AGC-1-1 Sc: 61.3 GGGGGTTTAGCTCAGTTGGT.A.GAGCGTTCGCTTAGCActttgtctaatt......................TGCGAAAG...........GtCGCGTGTTCGACTCATGCAGTCTCCA tRNA-Ala-AGC-1-2 Sc: 61.3 GGGGGTTTAGCTCAGTTGGT.A.GAGCGTTCGCTTAGCActttgtctaatt......................TGCGAAAG...........GtCGCGTGTTCGACTCATGCAGTCTCCA tRNA-Ala-AGC-1-3 Sc: 61.3 GGGGGTTTAGCTCAGTTGGT.A.GAGCGTTCGCTTAGCAccttgtctaatt......................TGCGAAAG...........GtCGCGTGTTCGACTCATGCAGTCTCCA tRNA-Ala-AGC-1-4 Sc: 61.3 GGGGGTTTAGCTCAGTTGGT.A.GAGCGTTCGCTTAGCActttgtctaatt......................TGCGAAAG...........GtCGCGTGTTCGACTCATGCAGTCTCCA tRNA-Ala-AGC-1-5 Sc: 61.3 >>>>>>>..>>>............<<<.>>>>>.........................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGGAATATGGTCTAGT.GGT.A.TGACGTCGCTTCCGCAtacctgttggatcctccaagttcgcggtccggaaAAGCGAAG...........GtCCGGGGTTCGATCCCCTGTGTTTCCA tRNA-Ala-CGC-1-1 Sc: 56.5 >>>>>>>..>>>>..........<<<<.>>>>>.........................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGGGGCGTAGCTCAGT.GGC.A.GAGCGTCTCATTTGCAttcgcaagacgatccaact...............TTGAGAAG...........GtCTGGGGTTCAATCCCCCACGCCTCCA tRNA-Ala-TGC-1-1 Sc: 64.9 >>>>>>>..>>>>..........<<<<.>.>>>.........................................<<<.<................>>>>>.......<<<<<<<<<<<<. GGGGGCATAGTATAGTTGGTcA.GTATACTTCCTTTGCA..................................AGGATGGG...........A.GACAGGTTCGAGTCCTGTTGCCTCCA tRNA-Ala-TGC-2-1 Sc: 51.7
Arg tRNAs
>>>>>>>..>>>............<<<.>>>>>....................................................<<<<<.................>>>>>.......<<<<<<<<<<<<. GGCCGGTTGGCCCAAT.GGT.A.AGGCGTCTGACTACGAtgacccacattggcaaatcgtgtaa....................ATCAGGAG...........At.TCTGGGTTCGAGCCCCAGGCTGGTCA tRNA-Arg-ACG-1-1 Sc: 62.7 GGCCGGTTGGCCCAAT.GGT.A.AGGCGTCTGACTACGAttgcgtccctcgagggcgtcttgtatca.................ATCAGGAG...........At.TCTGGGTTCGAGCCCCAGGCTGGTCA tRNA-Arg-ACG-1-2 Sc: 62.6 GGCCGGTTGGCCCAAT.GGT.A.AGGCGTCTGACTACGAtgactctgtgtggtaaatcccatactgaaggcagttta.......ATCAGGAG...........At.TCTGGGTTCGAGCCCCAGGCTGGTCA tRNA-Arg-ACG-1-4 Sc: 62.2 GGCCGGTTGGCCCAAT.GGT.A.AGGCGTCTGACTACGAtcccgtccgtggtttcatccacccttaagagaggcgccaggtataATCAGGAG...........At.TCTGGGTTCGAGCCCCAGGCTGGTCA tRNA-Arg-ACG-1-3 Sc: 61.9 >>>>>>>..>>>>..........<<<<.>>>>>....................................................<<<<<.................>>>>>.......<<<<<<<<<<<<. GGGTCTTTAGCTCAGC.AGT.A.GAGCGGCAGACTTCGGtagaaattctgaagaaaatcgtcacgatttgca............TTCTGCAG...........Gt.CGCGGGTTCAATCCCCGTAGGACTCT tRNA-Arg-TCG-2-1 Sc: 55.1 GGGTCTTTAGCTCAGC.AGT.A.GAGCGGCAGACTTCGGttcgcattctgaagaaaccatcaaagggttgca............TTCTGCAG...........Gt.CGCGGGTTCAATCCCCGTAGGACTCT tRNA-Arg-TCG-2-2 Sc: 55.1 GGGTCTTTAGCTCAGC.AGT.A.GAGCGGCAGACTTCGGtaggaattctgaagaaactttcacggttgta..............TTCTGCAG...........Gt.CGCGGGTTCAATCCCCGTAGGACTCT tRNA-Arg-TCG-2-3 Sc: 55.1 >>>>>>>..>>>............<<<.>>>>>....................................................<<<<<.................>>>>>.......<<<<<<<<<<<<. GCATACTTAGCTAAATTGGT.A.AAGCGCCTAACTTCGG.............................................ATTAGGAG...........AttTAGGGGTTCGAGCCCTCTAGTGTGCT tRNA-Arg-TCG-1-1 Sc: 53.5 >>>>>>>..>>>>..........<<<<.>>>>>....................................................<<<<<.................>>>>>.......<<<<<<<<<<<<. GCGCTCTTGGCGCAGT.GGT.A.GCGCGTGTCTCTCCTAcacgcatacgtattgaaacgtgtaaacattctcccc.........AAGACGAG...........Gt.CGTGGGTTCGACCCCCACAGGGCGCT tRNA-Arg-CCT-1-1 Sc: 67.2 >>>>.>>..>>>>..........<<<<.>>>>>....................................................<<<<<.................>>>>>.......<<<<<<<.<<<<. GGCGTTGTGGCGCAAT.GGCtA.GCGCATAGAGCTTCTAaaaaaatggattcaagtgtcgagttcgactcggttgtttgaaataACTCTAAG...........Gc.TGCGGGTTCGAGTCCCGCCATCGCCT tRNA-Arg-TCT-1-1 Sc: 60.7
Asn tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<. GGCTCCTTAGCTCAGTTGGTtA.GAGCGTAGCACTGTTAATGCTGAG...........GtCGGCGGTTCGAGCCCGCCAGGGGTCG tRNA-Asn-GTT-1-1 Sc: 79.8 GGCTCCTTAGCTCAGTTGGTtA.GAGCGTAGCACTGTTAATGCTGAG...........GtCGGCGGTTCGAGCCCGCCAGGGGTCG tRNA-Asn-GTT-1-2 Sc: 79.8 GGCTCCTTAGCTCAGTTGGTtA.GAGCGTAGCACTGTTAATGCTGAG...........GtCGGCGGTTCGAGCCCGCCAGGGGTCG tRNA-Asn-GTT-1-3 Sc: 79.8 GGTACTATAACATAGT.GGT.A.ATGTGGCGTACTGTTAATACGTTC...........AgCGAAAGTTCGATTCTTTCTAGTGCCT tRNA-Asn-GTT-2-1 Sc: 48.6
Asp tRNAs
>>>>>>>..>>>...........<<<.>>>>>......................................<<<<<...............>>>>>.......<<<<<<<<<<<<. TCCGAATTAGTTTAGTGGCtA.TGACGGCGCCTTGTCAgtgttctccgcgcagaaaaa...........CGGCGCAG...........ACCCGGGTTCAATTCCCGGATTCGGAG tRNA-Asp-GTC-1-4 Sc: 53.5 TCCGAATTAGTTTAGTGGCtA.TGACGGCGCCTTGTCAttcaattgactacctctccgcgcagaata..CGGCGCAG...........ACCCGGGTTCAATTCCCGGATTCGGAG tRNA-Asp-GTC-1-1 Sc: 53.1 TCCGAATTAGTTTAGTGGCtA.TGACGGCGCCTTGTCAttcaattgactacgttctccgcgcagaaataCGGCGCAG...........ACCCGGGTTCAATTCCCGGATTCGGAG tRNA-Asp-GTC-1-2 Sc: 53.1 TCCGAATTAGTTTAGTGGCtA.TGACGGCGCCTTGTCAttcaattgactacgttctccgcgcagaaataCGGCGCAG...........ACCCGGGTTCAATTCCCGGATTCGGAG tRNA-Asp-GTC-1-3 Sc: 53.1
Cys tRNAs
>>>>>>>..>>>..........<<<.>>>>>.....................................<<<<<................>>>>>.......<<<<<<<<<<<<. GTGGGAGAGGCTTAGTGGTT.TGGCGTGAGATTGCAAcgtatcttgatagagcggcgctccaaaa..ATCTTGAG...........GtCGTGGGTTCGATTCCCACCTTCCACT tRNA-Cys-GCA-1-1 Sc: 52.2 GTGGGAGAGGCTTAGTGGTT.TGGCGTGAGATTGCAAcgtatctgttctggaacgaagctaagaaagATCTTGAG...........GtCGTGGGTTCGATTCCCACCTTCCACT tRNA-Cys-GCA-1-2 Sc: 52.1
Gln tRNAs
>>>>>>>..>>>>............<<<<.>>>>>...............................................<<<<<...............>>>>>.......<<<<<<<<<<<<. GGTTGTATGGAGTAGTTGGTt..A.ACTTAGGAGATTCTGActtggcgcggttctaacaggctgcgatagtacgaat....TTCTCTTG...........CCCTGGGTTCGAATCCCAGTACGACCT tRNA-Gln-CTG-1-1 Sc: 55.4 GGTTGTATGGAGTAGTTGGTt..A.ACTTAGGAGATTCTGActtgcgatctgccccagcgcgggttcctgatagtacgaatTTCTCTTG...........CCCTGGGTTCGAATCCCAGTACGACCT tRNA-Gln-CTG-1-2 Sc: 55.2 >>>>>>>..>>>>............<<<<.>>>>>...............................................<<<<<...............>>>>>.......<<<<<<<<<<<<. GGTTGTATGGAGTAGT.GGTc..A.ACTTAGGAGATTTTGAtaagcgcttaaaggtttgagcgttaagtccaaat......TTCTCTTG...........CCCCGGGTTCGAATCCCGGTACGACCT tRNA-Gln-TTG-2-1 Sc: 55.5 GGTCGTGTGATGTAGT.GGTcgaA.GCATTCCAGATTTTGAtaggtacaacaagtctgtgctaaggtcaaacgg.......TTCTGGCT...........ACCTGGGTTCGAATCCCAGCATGACCA tRNA-Gln-TTG-1-1 Sc: 55.2
Glu tRNAs
>>>>.>>..>>>>.........<<<<.>>>>>......................................<<<<<...............>>>>>.......<<<<<<<.<<<<. TCCCAGTTAGTACAATGGTcA.GTATATATCGCTCTCAatctcgagattcgat................CCGATAAG...........ATCAGGGTTCGATTCCCTGGCCGGGAA tRNA-Glu-CTC-1-1 Sc: 47.1 TCCCAGTTAGTACAATGGTcA.GTATAGGGCACTCTCAtgcgacttgcatatgataa............CTGCTCAG...........ATCAGGGTTCGATTCCCTGGCCGGGAA tRNA-Glu-CTC-2-2 Sc: 39.3 TCCCAGTTAGTACAATGGTcA.GTATAGGGCACTCTCAtgcggttagcatatagta.............CTGCTCAG...........ATCAGGGTTCGATTCCCTGGCCGGGAA tRNA-Glu-CTC-2-3 Sc: 39.3 TCCCAGTTAGTACAATGGTcA.GTATAGGGCACTCTCAtgcggttgccgttggcaccacatcgta....CTGCTCAG...........ATCAGGGTTCGATTCCCTGGCCGGGAA tRNA-Glu-CTC-2-1 Sc: 39.0 >>>>>>>..>>>>.........<<<<.>>>>>......................................<<<<<...............>>>>>.......<<<<<<<<<<<<. GGTCTCTTAGTTTAAAGGT.A.AAACAGTAGATCTTCA...............................TTTTACTA...........ATAGGAGTTCGATTCTCCTAGAGATCA tRNA-Glu-TTC-2-1 Sc: 43.0 >>>>.>>..>>>>.........<<<<.>>>>>......................................<<<<<...............>>>>>.......<<<<<<<.<<<<. TCCCAGTTAGTACAACGGTcA.GTATACGGCTTTTTCAttacataagcgttatctaagcttatagaaaaCAGCTGAG...........ATCGGGGTTCGATTCCCCGGCCGGGAA tRNA-Glu-TTC-1-1 Sc: 36.7
Gly tRNAs
>>>>>>>..>.>>............<<<.>>>>>.........................................<<<<<................>>>>>.......<<<<<.<<<<<<<. GCATTGATAG.TGTAGGGGT..A.TCATGAGTCGTTGCCAaactcatcgcctgcacaaggcgtgactaccgat.TCGACTCG...........A.CCGGGGTTCGAGTCCCCG.TCAATGCA tRNA-Gly-GCC-1-1 Sc: 54.0 GCATTGATAG.TGTAGGGGT..A.TCATGAGTCGTTGCCAaactcatcgcctgcataaggcgtgactaccgat.TCGACTCG...........A.CCGGGGTTCGAGTCCCCG.TCAATGCA tRNA-Gly-GCC-1-2 Sc: 54.0 GCATTGATAG.TGTAGGGGT..A.TCATGAGTCGTTGCCAaactcatcgtcttgaccgagacgtgactaccgatTCGACTCG...........A.CCGGGGTTCGAGTCCCCG.TCAATGCA tRNA-Gly-GCC-1-3 Sc: 54.0 GCATTGATAG.TGTAGGGGT..A.TCATGAGTCGTTGCCAaactcatcgcctgcataaggcgtgactaccgat.TCGACTCG...........A.CCGGGGTTCGAGTCCCCG.TCAATGCA tRNA-Gly-GCC-1-4 Sc: 54.0 GCATTGATAG.TGTAGGGGT..A.TCATGAGTCGTTGCCAaactcatcgtcttgaccgagacgtgactaccgatTCGACTCG...........A.CCGGGGTTCGAGTCCCCG.TCAATGCA tRNA-Gly-GCC-1-5 Sc: 54.0 GCATTGATAG.TGTAGGGGT..A.TCATGAGTCGTTGCCAactcatcgccttgcataaggcgtgactaccgat.TCGACTCG...........A.CCGGGGTTCGAGTCCCCG.TCAATGCA tRNA-Gly-GCC-1-6 Sc: 54.0 >>>>>>>..>.>>............<<<.>>>>>.........................................<<<<<................>>>>>.......<<<<<.<<<<<<<. GCGTTCATAG.TGTAGCGGTtgA.TCACGTTGCTTTCCCAcgcggatt..........................AAGCAGAG...........GcCGCGGGTTCGATCCCCGC.TGGACGCA tRNA-Gly-CCC-1-1 Sc: 64.8 >>>>>>>..>.>>............<<<.>.>>>.........................................<<<.<................>>>>>.......<<<<<.<<<<<<<. GCGCCGATAGtTGTAGTGGTt.A.TCATTCTTGCCTTCCA..................................AGCATGAG...........A.CAGGGGTTCGATTCCCCT.TCGGCGCA tRNA-Gly-TCC-1-1 Sc: 63.0 >>>>>>>..>.>>>..........<<<<.>>>>>.........................................<<<<<................>>>>>.......<<<<<.<<<<<<<. GCTAGTGTAG.TTTAATGGT..A.AAACTTGGGACTTCCA..................................CTCTCAC............AtTTTCGGTTCGATTCCGAA.TACTAGTA tRNA-Gly-TCC-3-1 Sc: 49.1 .....>>..>.>>............<<<.>.>>>.........................................<<<.<................>>>>>.......<<<<<.<<...... GCGCCGATAG.TGTAGTGGTt.A.TCATTCTTGCCTTCCA..................................AGCATGAG...........A.CAGGGGTTCGATTCCCCT.TCNNNNNN tRNA-Gly-TCC-2-1 Sc: 42.8
His tRNAs
>>>>>>>..>>.>..........<.<<.>>>>>..................................<<<<<..................>>>.>.......<.<<<<<<<<<<. GCAGCTGTAGTATAGT.GGTtA.GCACGGCTCGTTGTGGatgccgcccgattgggcaattctcgaaCCGAGCAG..............ACGGATGTTCGATTCCTCCCAGCTGCA tRNA-His-GTG-2-1 Sc: 45.8 GCGGCTGTAGTATAGT.GGTtA.GCACGGCTCGTTGTGGgtccctgtttcttcaggatactgctg.CCGAGCAG..............ACGGATGTTCGATTCCTCCCAGCCGCA tRNA-His-GTG-1-1 Sc: 45.5 >>>>.>>..>>>>..........<<<<..>>>>..................................<<<<...................>>>>>.......<<<<<<<.<<<<. GTAATACTAGCTTAATTGGT.A.AAGCGCCAATCTGTGG...........................AGTTG.TGTTC...........ATTCCGGTTCAAGTCCGGAGTTTTACC tRNA-His-GTG-3-1 Sc: 32.2
Ile tRNAs
>>>>>>>..>>>............<<<.>>>>>................................................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GCTTCGTTAGCGTAGTTGGAttATCGCATCCGTCTAATAcacggtgcctcagatacatctgagtttcatattaac.....................................AACGGAAG...........GtCACTGGTTCGAGCCCAGTACGGAGCA tRNA-Ile-AAT-1-1 Sc: 66.9 GCTTCGTTAGCGTAGTTGGAttATCGCATCCGTCTAATAcacggtgcctcagatacatctgagtttcatattaac.....................................AACGGAAG...........GtCACTGGTTCGAGCCCAGTACGGAGCA tRNA-Ile-AAT-1-2 Sc: 66.9 GCTTCGTTAGCGTAGTTGGAttATCGCATCCGTCTAATAcaggatgcctgagagaaaaatttcagaaaaccccatcccctaacttattaagcct..................AACGGAAG...........GtCACTGGTTCGAGCCCAGTACGGAGCA tRNA-Ile-AAT-1-3 Sc: 66.2 >>>>>>>..>>>............<<<.>>>>>................................................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GCTCCGGTGGCCAAGTTGGAttAAGGCATGTGGCTTATGcttctcagtttcgccgctcgagatcatacattcagaatcgcagaaaaggagtcttttctttaacaaaaatttaACCGCGAG...........AtCGTGGGTTCGAGTCCCACCCGGAGCA tRNA-Ile-TAT-1-1 Sc: 62.0
Leu tRNAs
>>>>>>>..>>>..............<<<.>>>>>.................................................................................<<<<<..>>..............<<...>>>>>.......<<<<<.<<<<<<<. GGCAAGATGGCCGAGT.GGTctA..AGGCGTAGCATTAAGGaagatattctgactgttcaggaaaac................................................CTGCTAT.CTT............CGGG.CGTGGGTTCGAATCCCAC.TCTTGTCA tRNA-Leu-AAG-1-1 Sc: 65.4 GGCAAGATGGCCGAGT.GGTctA..AGGCGTAGCATTAAGGaagatattctgactgttcaggaaaac................................................CTGCTAT.CTT............CGGG.CGTGGGTTCGAATCCCAC.TCTTGTCA tRNA-Leu-AAG-1-2 Sc: 65.4 GGCAAGATGGCCGAGT.GGTctA..AGGCGTAGCATTAAGGaagatattctgagtgttcaggaaaac................................................CTGCTAT.CTT............CGGG.CGTGGGTTCGAATCCCAC.TCTTGTCA tRNA-Leu-AAG-1-3 Sc: 65.4 >>>>>>>..>>>..............<<<.>>>>>.................................................................................<<<<<..>>..............<<...>>>>>.......<<<<<.<<<<<<<. GGCAAGATGGCCGAGT.GGTctA..AGGCGCTGTGTTCAGGaacaagttctacaggagaattcatctcca.............................................TCGCAGT.CTT............CGGG.CGTGGGTTCGAATCCCAC.TCTTGTCA tRNA-Leu-CAG-1-1 Sc: 65.2 GGCAAGATGGCCGAGT.GGTctA..AGGCGCTGTGTTCAGGaaaaagttctacaggagaattcatctcca.............................................TCGCAGT.CTT............CGGG.CGTGGGTTCGAATCCCAC.TCTTGTCA tRNA-Leu-CAG-1-2 Sc: 65.2 >>>>>>>..>>>..............<<<.>>>>>.................................................................................<<<<<.......................>>>>>.......<<<<<.<<<<<<<. GGCTGGTTGGTGAAGT.GGCctA..ACACACTGGTTTTAGGaatctaacattttcgaatacgcggctccgca...........................................CACCAGGA..................TtCCTGGGTTCGAATCCCAG.ACTAGTCA tRNA-Leu-TAG-1-1 Sc: 47.9 >>>>>>>..>>>..............<<<.>>>>>.................................................................................<<<<<..>>>>..........<<<<...>>>>>.......<<<<<.<<<<<<<. GTGAGTGTGTTGAAATTGGT..Ag.CCAAGTCGACCTTAGG..........................................................................AGTCGGT.AGTCTTA.......GACTG.TGTAGGTTCAAGTCCTAT.CACTCACA tRNA-Leu-TAG-2-1 Sc: 41.4 >>>>>>>..>>>..............<<<.>>>>...................................................................................<<<<..>>>>..........<<<<...>>>>>.......<<<<<.<<<<<<<. AGACTAGTAGCGAAGT.GGTcaA..ACGCGAGAGATTTAAGtgttaggtcttggctcgtttgccgggatgtggtgatggctcgctcagtgtgattaatgccagatccttacctatTCCTCTT.CCTT..........AGGGTtCGTGGGTTCGAACCCCAC.CTAGTCTA tRNA-Leu-TAA-1-1 Sc: 46.8
Lys tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.........................................<<<<<................>>>>>.......<<<<<<<<<<<<. TCCCGGCTAGCTCAGTCGGT.AGAGCGTCAGACTCTTActacaagggtttccgagcatgttctcggtcta..ATCTGAAT...........GtCGTGGGTTCGAGCCCCACGTTGGGAG tRNA-Lys-CTT-1-1 Sc: 77.2 TCCCGGCTAGCTCAGTCGGT.AGAGCGTCAGACTCTTAttacaagggtttccgagacttattctcgggtc..ATCTGAAT...........GtCGTGGGTTCGAGCCCCACGTTGGGAG tRNA-Lys-CTT-1-2 Sc: 77.2 TCCCGGCTAGCTCAGTCGGT.AGAGCGTCAGACTCTTActacaagggtttccgagcttgtctcggagtc...ATCTGAAT...........GtCGTGGGTTCGAGCCCCACGTTGGGAG tRNA-Lys-CTT-1-3 Sc: 77.2 TCCCGGCTAGCTCAGTCGGT.AGAGCGTCAGACTCTTActcaagggtttccgagccagttctcgggtc....ATCTGAAT...........GtCGTGGGTTCGAGCCCCACGTTGGGAG tRNA-Lys-CTT-1-5 Sc: 77.2 TCCCGGCTAGCTCAGTCGGT.AGAGCGTCAGACTCTTActtacaagggtttccgagacttattctcgggtc.ATCTGAAT...........GtCGTGGGTTCGAGCCCCACGTTGGGAG tRNA-Lys-CTT-1-4 Sc: 77.1 >>>>>>>..>>>>.........<<<<.>>>>>.........................................<<<<<................>>>>>.......<<<<<<<<<<<<. TCCCGATTAGCTCAGTCGGT.AGAGCGTCAGACTTTTAacacaaagtctccaagctggtcttggaatgtttaATCTGAAT...........GtCAGGGGTTCGAGCCCCCTATTGGGAG tRNA-Lys-TTT-1-1 Sc: 73.2 GAAGGTATAACTCAGTTGGTtAGAGTGCGATACTTTTA..................................ATATCGAC...........GtCGTAGGTTCGAGCCCTACTATCTTTA tRNA-Lys-TTT-2-1 Sc: 64.4
Met tRNAs
>>>>>>>..>>>>.........<<<<.>>>>.......................................................................<<<<................>.>>>>.......<<<<<.<<<<<<<. GTCTTCGTGGCCTAGTTGGT.AGGGCGTAGGTCTCATActttgagaagctaccaaagctaaatcaacgatcctgttacacgggaatcaacctattagac.ATCCTAAG...........AtCG.CGAGTTCGAGCCTCGC.CGAGGACA tRNA-Met-CAT-1-1 Sc: 70.7 GTCTTCGTGGCCTAGTTGGT.AGGGCGTAGGTCTCATActttgagaagctacacaaagctgcatcaacgatcctgttacacgggaatcaacctattagacATCCTAAG...........AtCG.CGAGTTCGAGCCTCGC.CGAGGACA tRNA-Met-CAT-1-2 Sc: 70.7 >>>>>>>..>>>>.........<<<<.>>>>>.....................................................................<<<<<................>.>>>>.......<<<<<.<<<<<<<. AGCTTCTTAGCGCAGTAGGT.AGCGCGTTGGGCTCATAccagtctatgaaaatttacctttccgctgcaaagcggtgta.....................ACCCAAAG...........GtCG.TCGGATCGAAACCGAC.AGAAGCTA tRNA-Met-CAT-2-1 Sc: 63.8 AGCTTCTTAGCGCAGTAGGT.AGCGCGTTGGGCTCATAccagtctatgaaaatttacctttccgctgcaaagcggtgta.....................ACCCAAAG...........GtCG.TCGGATCGAAACCGAC.AGAAGCTA tRNA-Met-CAT-2-2 Sc: 63.8 >>>>>.>..>>.>.........<.<<.>>>>>.....................................................................<<<<<................>.>>>>.......<<<<<.<.<<<<<. GCTGGAATAGGCTAACTGGTtAAACCATACCATTCATA..............................................................CTGGTAA............AtCGaAGGGTTCGAGTCCCTC.TCCCAGCT tRNA-Met-CAT-3-1 Sc: 34.9
Phe tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GCTTCTTTAGCTCAGTTGGTAcGAGCGTCCGACTGAAGaattcagtttcaccagtcgccactgtttgcagtggacaaggtATCGGGAG...........GtCACCTGTTCGACCCAGGTAAGGAGCA tRNA-Phe-GAA-1-1 Sc: 61.3 GCTTCTTTAGCTCAGTTGGTAcGAGCGTCCGACTGAAGaattcagtttcaccagtcgccactgtttccagtggacaaggtATCGGGAG...........GtCACCTGTTCGACCCAGGTAAGGAGCA tRNA-Phe-GAA-1-2 Sc: 61.3 GCCTCAATAGCTTAGATGGTA.GAGCATAGAACTGAAG..........................................CTTCTAAC...........G.GATTGGTTCGATTCCAGTTTGAGGCA tRNA-Phe-GAA-2-1 Sc: 58.2
Pro tRNAs
>>>>>>>...>>>............<<<.>>>>>...........................................................<<<<<................>>>>>.......<<<<<.<<<<<<<. GGGCCAA.TCGTATAGTGGCttA.TTATGCTGTCTTAGGGctttcgcgtcttcggatgcttgcactaagt......................TGACAGAG...........GtCCCCGGTTCGATTCCGGG.TTGGCCCC tRNA-Pro-AGG-1-1 Sc: 40.2 GGGCCAA.TCGTATAGTGGCttA.TTATGCTGTCTTAGGGctttcgcttcttcggatgcttgcactaagt......................TGACAGAG...........GtCCCCGGTTCGATTCCGGG.TTGGCCCC tRNA-Pro-AGG-1-2 Sc: 40.2 GGGCCAA.TCGTATAGTGGCttA.TTATGCTGTCTTAGGGctattcctcttcatttctaaaagaggcatgcactaagt..............TGACAGAG...........GtCCCCGGTTCGATTCCGGG.TTGGCCCC tRNA-Pro-AGG-1-3 Sc: 39.9 >>>>>>>...>>>>..........<<<<.>>>>>...........................................................<<<<<................>>>.>.......<.<<<.<<<<<<<. GGTTGCT.TCGTCCAGTGGT..A.GGATACCTCTTTCGGGcaatacccggtgtgtttcacactagaagagttcaaaaagaggctctaaaaaaTAGAGGTG...........GtCGCGAGTTCGAATCCCGC.AGTGACCC tRNA-Pro-CGG-1-1 Sc: 45.6 >>>>>>>...>>>............<<<.>>>>>...........................................................<<<<<................>>>>>.......<<<<<.<<<<<<<. GGCCGCT.TGGCGTAGTGGT..A.TCGCGCTTGCTTTGGGaatgattctccggaaaagtttgcgata.........................TGCAAGAG...........GtCACGAGTTCGATCCTCGT.AGCGGCCC tRNA-Pro-TGG-1-1 Sc: 68.8 >>>>>>>...>>>>..........<<<<.>>>>>...........................................................<<<<<................>>>>>.......<<<<<.<<<<<<<. CAGATTGaTGGCCTAATGGTtcA.GGGCGATCACTTTGGG....................................................AGTGATA............GtACTGAGTTCAAGTCTCAG.CAGTCTGA tRNA-Pro-TGG-2-1 Sc: 40.0 CAGATTGaTGGCCTAATGGTtcA.GGGCGATCACTTTGGG....................................................AGTGATA............GtACTGAGTTCAAGTCTCAG.CAGTCTGA tRNA-Pro-TGG-2-2 Sc: 40.0
SeC tRNAs
Ser tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.........................................................<<<<<..>>>>.............<<<<...>>>>>.......<<<<<.<<<<<<<. GGCGCTTTGGCGGAGTGGTt.A.TCGCGTGGCACTAGAAtttcgcattctagagtatcttcctactcaacaaaacaa............ATGCCAT.TCCC...TCT.......GGGAG.CATAGGTTCAAATCCTGT.AGGCGTCG tRNA-Ser-AGA-1-1 Sc: 60.1 GGCGCTTTGGCGGAGTGGTt.A.TCGCGTGGCACTAGAAtttcgcattctagagtacttctactcaacaacaaaat.............ATGCCAT.TCCC...TCT.......GGGAG.CATAGGTTCAAATCCTGT.AGGCGTCG tRNA-Ser-AGA-1-2 Sc: 60.1 >>>>>>>..>>>............<<<.>>>>>.........................................................<<<<<..>>>>.............<<<<...>>>>>.......<<<<<.<<<<<<<. GGCGCTCTGCCCGAGTGGTt.A.AGGGGTAAGTCTCGAActacatttcgatcgtccttctgtgacgagtt...................AACTTAT.AGGC...TCT.......GCCTG.CGTCGGTTCAAATCCGAC.GGGCGTCG tRNA-Ser-CGA-1-2 Sc: 66.6 GGCGCTCTGCCCGAGTGGTt.A.AGGGGTAAGTCTCGAActacaaattcgatcgtccttccgtgacgagtt..................AACTTAT.AGGC...TCT.......GCCTG.CGTCGGTTCAAATCCGAC.GGGCGTCG tRNA-Ser-CGA-1-1 Sc: 66.5 >>>>>>>..>>>............<<<.>>>>>.........................................................<<<<<..>>>...............<<<...>>>>>.......<<<<<.<<<<<<<. GGTGCTCTGCCCGAGTGGTt.A.AGGGGTTAGTCTTGAAtttgacattcaatggtcgtgttctacgctgatt.................AACTAATGGTC....TCT........GGCCtCACAGGTTCGAATCCTGT.GGGCACCG tRNA-Ser-TGA-1-1 Sc: 63.5 >>>>>>>..>>>............<<<.>>>>>.........................................................<<<<<..>>>>>...........<<<<<...>>>>>.......<<<<<.<<<<<<<. GGACGTGTGACAGAGTGGTttA.ATGTACCTGGCTTGAG..................................................TCTAGGAGTTCTCAC.......CCGAGAAC.CGGGAGTTCGAATCTCCC.CGCGTCCG tRNA-Ser-TGA-2-1 Sc: 50.8 >>>>>>>..>>>............<<<.>>>>>.........................................................<<<<<..>>>>.............<<<<...>>>>>.......<<<<<.<<<<<<<. GACGCTTTGGTGGAGTGGTt.A.ACACGTATCCCTGCTAttaacagcatctcgtttgacgattgta.......................AGGATAT.CCTC...TTT.......GAGGG.CGTGAGTTCGAATCTCAC.AGGCGTCG tRNA-Ser-GCT-1-1 Sc: 67.0 GACGCTTTGGTGGAGTGGTt.A.ACACGTATCCCTGCTActatttctctcgcagaaaagacaggtgagcatttcgcaagcgcgaatgatAGGATAT.CCTC...TCT.......GAGGG.CGTGAGTTCGAATCTCAC.AGGCGTCG tRNA-Ser-GCT-2-1 Sc: 65.5
Sup tRNAs
Thr tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.....................................<<<<<................>>>>>.......<<<<<<<<<<<<. GCCTCCTTAGCTCAGCGGTA.GAGCACTTCACTAGTA..............................ATGAAGAG...........GtCAGTCGTTCGAGTCGGCTAGGAGGCA tRNA-Thr-AGT-1-1 Sc: 75.4 GCCTCCTTAGCTCAGCGGTA.GAGCACTTCACTAGTA..............................ATGAAGAG...........GtCAGTCGTTCGAGTCGGCTAGGAGGCA tRNA-Thr-AGT-1-2 Sc: 75.4 GCCTCCTTAGCTCAGCGGTA.GAGCACTTCACTAGTA..............................ATGAAGAG...........GtCAGTCGTTCGAGTCGGCTAGGAGGCA tRNA-Thr-AGT-1-3 Sc: 75.4 >>>>>>>..>>>>........<<<<.>>>>>.....................................<<<<<................>>>>>.......<<<<<<<<<<<<. GCCTCTTTAGCTCAGTGGGA.GAGCGCGCCACTCGTActaacattcgat..................ATGGTGAG...........GtCACTAGTTCAATCCTGGTAGGAGGCA tRNA-Thr-CGT-1-1 Sc: 63.8 >>>>>>>..>>>>........<<<<.>>>>>.....................................<<<<<................>>>>>.......<<<<<<<<<<<<. GTCGACTTAGTTTAGTGGTA.GAATAGGTAACTTGTA..............................ATTACTTG...........A.CACTAGTTCGATTCTAGTAGTCGGCA tRNA-Thr-TGT-2-1 Sc: 61.1 >>>>>>>..>>>..........<<<.>>>>>.....................................<<<<<................>>>>>.......<<<<<<<<<<<<. GCCTGCTTGGCTAAGTGGTA.CAGCGCGGCACTTGTAtaggcactcgaacagtgttctgatccaggcATGCCGAG...........AtCACTCGTTCGAACCGGGTAGTAGGCA tRNA-Thr-TGT-1-1 Sc: 59.5
Trp tRNAs
>>>>>>>..>>>>........<<<<.>>>>.............................<<<<................>>>>>.......<<<<<<<<<<<<. GGACCCATAGCTCAGCGGTA.GAGCGTCGGCTTCCAGtcgctctataaacaggaaaaTTCCGAAG...........GtCATCCGTTCAAATCGGGTTGGGTTCA tRNA-Trp-CCA-1-1 Sc: 53.9 GGACCCATAGCTCAGCGGTA.GAGCGTCGGCTTCCAGtcgctctatgttcaggaaaaTTCCGAAG...........GtCATCCGTTCAAATCGGGTTGGGTTCA tRNA-Trp-CCA-1-2 Sc: 53.9
Tyr tRNAs
>>>>>>>..>>>>.........<.<<<.>>>>>.......................................<<<<<.......................>>>>>.......<<<<<.<<<<<<<. CCGGACATAGCTCAGTTGGA.AGtAGCGATGGTTTGTAAttggaaaccctaatccggtattaacggaaaagCACCATAG..................GtCGCCGGTTCGATTCCGGC.TGTCCGGA tRNA-Tyr-GTA-1-1 Sc: 59.2 CCGGACATAGCTCAGTTGGA.AGtAGCGATGGTTTGTAAttggaaaccctaatccggtattaacggaaaagCACCATAG..................GtCGCCGGTTCGATTCCGGC.TGTCCGGA tRNA-Tyr-GTA-1-2 Sc: 59.2 CCGGACATAGCTCAGTTGGA.AGtAGCGATGGTTTGTAAttggaaaccctaatccggcattaacggaaaagCACCATAG..................GtCGCCGGTTCGATTCCGGC.TGTCCGGA tRNA-Tyr-GTA-1-3 Sc: 59.2 >>>>>>>..>>>>.........<.<<<.>>>>>.......................................<<<<<..>>>............<<<...>>>>>.......<<<<<.<<<<<<<. TGCAGATATGCTCTATTGGTtGG.GGCGGTGCTCTGTAA................................AAGCATT.GGCTGTA.......TGCCGtGGTGAGTTCGAATCTCAC.ATCTGCAA tRNA-Tyr-GTA-2-1 Sc: 30.6
Val tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.........................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGTTTCTTGGCGCAGTTGGTtA.GCGCGTCTCCTTAACAattctggtctctcagatcgttagggctta.....CGGAGGAG...........GtCGCCGGTTCGAACCCGGCAGAAATCA tRNA-Val-AAC-1-2 Sc: 69.5 GGTTTCTTGGCGCAGTTGGTtA.GCGCGTCTCCTTAACAgatttcgcattgaaacgttagggctta.......CGGAGGAG...........GtCGCCGGTTCGAACCCGGCAGAAATCA tRNA-Val-AAC-1-3 Sc: 69.5 GGTTTCTTGGCGCAGTTGGTtA.GCGCGTCTCCTTAACAattctggtcttcttcagatcgttagggctta...CGGAGGAG...........GtCGCCGGTTCGAACCCGGCAGAAATCA tRNA-Val-AAC-1-1 Sc: 69.4 GGTTTCTTGGCGCAGTTGGTtA.GCGCGTCTCCTTAACAattctggtctctttgttcagatcgttagggcttaCGGAGGAG...........GtCGCCGGTTCGAACCCGGCAGAAATCA tRNA-Val-AAC-1-4 Sc: 69.3 >>>>>>>..>>>>..........<<<<.>>>>>.........................................<<<<<................>>>>>.......<<<<<<<<<<<<. GCTTCGATCGATTAGC.GGTcA.AATCACGCCCTTCACAagcagcgctttcaggaagaaag............CGGGTGAG...........C.CCCCGGTTCGATTCCGGGTCGAAGCA tRNA-Val-CAC-1-1 Sc: 45.9 >>>>>>>..>>>>..........<<<<..>>>>.........................................<<<<.................>>>>>.......<<<<<<<<<<<<. GCTGCTTTAGCTCAGT.GGCtA.GAGCGCTGCCTTTACAccgttcgtttcatgagacgatagcttgttaaa..CGGCATAG...........GcCACAGGTTCGATCCCTGTAAGCAGCA tRNA-Val-TAC-1-1 Sc: 60.6 >>>>>>>..>>>>..........<<<<.>>>>>.........................................<<<<<................>>>>>.......<<<<<<<<<<<<. AAGGGTTTAGCTGAGT.GGT.T.TAGCATCGATCTTACA..................................CATCGAGG...........A.CAGAGGTTCGATTCCTCTAATTCTTA tRNA-Val-TAC-2-1 Sc: 46.7