Structurally Aligned tRNAs (by Isotype & Anticodon)

Structural alignments are generated by aligning tRNA sequences against domain-specific tRNA covariance models with the use of COVE.

Ala tRNAs
>>>>>.>..>>>...........<<<.>>>>>...........................................<<<<<................>>>>>.......<<<<<<.<<<<<. GGGGATATGGTTTAGT.GGTA.TAACGCTTCTTTAGCA....................................TAGAAGAG...........GtCCGGCGTTCGATTCGCCGTTTCTCCA tRNA-Ala-AGC-1-1 Sc: 65.4 GGGGATATGGTTTAGT.GGTA.TAACGCTTCTTTAGCA....................................TAGAAGAG...........GtCCGGCGTTCGATTCGCCGTTTCTCCA tRNA-Ala-AGC-3-3 Sc: 65.4 GGGGATATGGTTTAGT.GGTA.TAACGCTTCTTTAGCActcgagattcgtctcctgtaaca.............TAGAAGAG...........GtCCGGCGTTCGATTCGCCGTTTCTCCA tRNA-Ala-AGC-3-1 Sc: 57.6 GGGGATATGGTTTAGT.GGTA.TAACGCTTCTTTAGCAcctgatcatcagatcaagcacgatt...........TAGAAGAG...........GtCCGGCGTTCGATTCGCCGTTTCTCCA tRNA-Ala-AGC-3-2 Sc: 57.5 GGGGATATGGTTTAGT.GGTA.TAATGCTTCTTTAGCActtgagtttcgtactctggtaata............TAGAAGAG...........GtCCGGCGTTCGATTCGCCGTTTCTCCA tRNA-Ala-AGC-4-1 Sc: 54.8 GGGGATATGGTTTAGT.GGTA.TAATGCTTCTTTAGCActtgagtttcgtactctggtaata............TAGAAGAT...........GtCCGGCGTTCGATTCGCCGTTTCTCCA tRNA-Ala-AGC-2-1 Sc: 50.7 >>>>>>>..>>>>.........<<<<.>>>>>...........................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGGGCCGTAGCTCAGTTGGTA.GAGCGCGTCGTTCGCA....................................ATGACGAG...........GtCAGGGGTTCGACTCCCCTCGGCTCCA tRNA-Ala-CGC-1-1 Sc: 74.9 >>>>>.>..>>>...........<<<.>>>>>...........................................<<<<<................>>>>>.......<<<<<<.<<<<<. GGGGATATGGTTTAGT.GGTA.TAACGCGTCTTTCGCA....................................TAGATGAG...........GtCCGGCGTTCGATTCGCCGTTTCTCCA tRNA-Ala-CGC-3-1 Sc: 59.4 >>>>>>>..>>>...........<<<.>>>>>...........................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGGCGTTTGGTCTAGG.GGTA.TGATTTCCCCTTCGCAgatcacgtggatgtaacaattcatctgattctaaatTGGGGAAG...........GtCATGGGTTCAATTCCCATAATGTCCA tRNA-Ala-CGC-2-1 Sc: 55.7 >>>>>.>..>>>>.........<<<<.>>>>>...........................................<<<<<................>>>>>.......<<<<<<.<<<<<. GGGGCTGTAACTCAGT.GGTA.GAGTGTTCGCTTTGCAttaccccattctcaggattggatatgatacttata.TGCGAAAA...........GcCCAGGGTTCGATCCCCTGCCGCTCCA tRNA-Ala-TGC-2-1 Sc: 56.9 GGGGTTGTAACTCAGT.GGTA.GAGTGTTCGCTTTGCAttacctaatcttcggattaacatgatacttata...TGCGAAAA...........GcCCAGGGTTCGATCCCCTGCCACTCCA tRNA-Ala-TGC-1-1 Sc: 56.7
Arg tRNAs
>>>>>>>..>>>..........<<<.>>>>>................................................................................................................................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGCCTGCTGGCCCAATGGCA.AGGCGCTTGACTACGA.........................................................................................................................................................ATCAAGAG...........AtTGCAGGTTCGATCCCTGCGTAGGTCA tRNA-Arg-ACG-1-1 Sc: 74.3 GGCCTGCTGGCCCAATGGCA.AGGCGCTTGACTACGA.........................................................................................................................................................ATCAAGAG...........AtTGCAGGTTCGATCCCTGCGTAGGTCA tRNA-Arg-ACG-1-2 Sc: 74.3 GGCCTGCTGGCCCAATGGCA.AGGCGCTTGACTACGA.........................................................................................................................................................ATCAAGAG...........AtTGCAGGTTCGATCCCTGCGTAGGTCA tRNA-Arg-ACG-1-3 Sc: 74.3 GGCCTGCTGGCCCAATGGCA.AGGCGCTTGACTACGA.........................................................................................................................................................ATCAAGAG...........AtTGCAGGTTCGATCCCTGCGTAGGTCA tRNA-Arg-ACG-1-4 Sc: 74.3 >>>>>>>..>>>..........<<<.>>>>>................................................................................................................................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGCCCTGTGGCGAAAAGGTA.CCGCGTTGCCCTCCGActaacgtgacctcacgtttatgaa.................................................................................................................................AGGCAGAG...........AtTGTGGGTTCGATCCCCATCAGGGTCG tRNA-Arg-CCG-1-1 Sc: 53.1 >>>>>>>..>>>>........<<<<.>>>>>................................................................................................................................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGTTGGATGGTCTAACGGTA.AGATGTCCGCCTCCGTaagcaatcgattttgggccattcaaggcgattttgggctaacccctgcatctctgccttggataccaagagcggttggggaac......................................................................GGTGGGAG...........A.TTCCAGTTCAAATCTGGATCCAACCG tRNA-Arg-CCG-2-1 Sc: 31.0 >>>>>>>..>>>..........<<<.>>>>>................................................................................................................................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGCCTCCTGGCCCAATGGCA.AGGCGTTTGACTTCGAtttccgcttcggcgctatatggt..................................................................................................................................ATCAAAAG...........AtTGTCGGTTCGATCCCGGCGGGGGTCA tRNA-Arg-TCG-1-1 Sc: 60.5 >>>>>>>..>>>>........<<<<.>>>>>................................................................................................................................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGCCCTTTGGCGCAATGGTA.GCGCGTGGTCCTCCTA.........................................................................................................................................................AGACTGAG...........GtTGTCGGTTCGAGTCCGATGAGGGTCG tRNA-Arg-CCT-1-1 Sc: 55.8 >>>>>>>..>>>>........<<<<.>>>>>................................................................................................................................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GCTCCAATGGCGCAATGGTA.GCGCGCAAGACTTCTActaatgactctagtctagtcacgtaaatca...........................................................................................................................ATCTTGAG...........GtTGAGGGTTCGAGCCCCTCTTGGAGTG tRNA-Arg-TCT-1-1 Sc: 71.2 GCTCCAATGGCGCAATGGTA.GCGCGCAAGACTTCTActacacatttgaatgaaatagttcacgtgat..........................................................................................................................ATCTTGAG...........GtTGAGGGTTCGAGCCCCTCTTGGAGTG tRNA-Arg-TCT-3-1 Sc: 71.1 .>>>>>>..>>>>........<<<<.>>>>>................................................................................................................................................................<<<<<................>>>>>.......<<<<<<<<<<<.. AGGGTGCTGGCGCAGTGGTA.GTGCTCTTGATTTCTGctcctacttgattggattcattcaattcgagaggtggttcaactgggggttagtcaagaataaaaatctctgaccacgcacgttctactcgcatagcgtcttgtttaaccttgtatggctttagacaatagttctcaaagtaaaccaggaaaaTTCAGGAG...........GtCATCGGTTCGAATCCGGTGCACCCAT tRNA-Arg-TCT-2-1 Sc: 42.8
Asn tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.................................................<<<<<................>>>>>.......<<<<<<<<<<<<. TCCCTCGTGGCGCAATTGGCtA.GCGCGTTCGACTGTTA..........................................ATCGAGAG...........GtTGGTGGTTCGAGCCCACCCGAGGGAG tRNA-Asn-GTT-2-1 Sc: 77.1 TCCCTCGTGGCGCAATTGGCtA.GCGCGTTCGACTGTTA..........................................ATCGAGAG...........GtTGGTGGTTCGAGCCCACCCGAGGGAG tRNA-Asn-GTT-2-2 Sc: 77.1 TCCCTCGTGGCGCAAT.GGCtA.GCGCGTTCGACTGTTAaataaatagtaattctatacttgcaaatcttgcaatcttgcaATCGAGAG...........GtTGGTGGTTCGACCCCACCCGAGGGAG tRNA-Asn-GTT-1-1 Sc: 65.9
Asp tRNAs
>>>>>>>..>>>...........<<<.>>>>>.................<<<<<...............>>>>>.......<<<<<<<<<<<<. TCTTTGATGGTCTAACGGTcA.TGATTTCCGCTTGTCAtgtgacaaagCGCGGGAG...........ACCGGGGTTCGACTCCCCGTCAGAGAG tRNA-Asp-GTC-1-1 Sc: 54.8 TCTTTGATGGTCTAACGGTcA.TGATTTCCGCTTGTCAttcgacaaagCGCGGGAG...........ACCGGGGTTCGACTCCCCGTCAGAGAG tRNA-Asp-GTC-1-2 Sc: 54.8 TCTTTGATGGTCTAACGGTcA.TGATTTCCGCTTGTCAttcgacaaagCGCGGGAG...........ACCGGGGTTCGACTCCCCGTCAGAGAG tRNA-Asp-GTC-1-3 Sc: 54.8 TCTTTGATGGTCTAACGGTcA.TGATTTCCGCTTGTCAttcgacaaagCGCGGGAG...........ACCGGGGTTCGACTCCCCGTCAGAGAG tRNA-Asp-GTC-1-4 Sc: 54.8
Cys tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<. GCTCCTTTAGCTCAGTGGTA.GAGCGGGAGATTGCAGATCTTCAG...........GtCGCTCGTTCGAACCGGGCAGGGAGCT tRNA-Cys-GCA-1-1 Sc: 68.4 GCTCCTTTAGCTCAGTGGTA.GAGCGGGAGATTGCAGATCTTCAG...........GtCGCTCGTTCGAACCGGGCAGGGAGCT tRNA-Cys-GCA-1-2 Sc: 68.4 GCTCCTTTAGCTCAGTGGTA.GAGCGGGAGATTGCAGATCTTCAG...........GtCGATCGTTCGAACCGGTCAGGGAGCT tRNA-Cys-GCA-2-1 Sc: 65.4
Gln tRNAs
>>>>>>>..>>>............<<<.>>>>>.....................................................................<<<<<................>>>>>.......<<<<<.<<<<<<<. GGTTCTATAGTGTAGTTGGTtA.TCACATCGGATTCTGA..............................................................TTCCGGGG...........A.CCTGAGTTCGAATCTCGG.TAGGACCT tRNA-Gln-CTG-2-1 Sc: 67.9 GGTTGTATAGTGTAGTTGGTtA.TCACATCGGATTCTGAtcatgcgattcattcgcaatca........................................TTCCGGGG...........A.CCTGAGTTCGAATCTCGG.TACGACCT tRNA-Gln-CTG-1-1 Sc: 59.9 >>>>>>>..>>>>..........<<<<.>>>>>.....................................................................<<<<<................>>>>>.......<<<<<.<<<<<<<. GGTTGTATAGTGTAGT.GGTtA.GCACGTGGGATTTTGAttcggatccaatttccaaattggattaaacactttgttgtgtggttatacatataaacaattTTCCCGA............AtCCCCGGTTCGAGCCCGGG.TACGACCT tRNA-Gln-TTG-2-1 Sc: 60.2 GGTTGTATAGTGTAAT.GGTtA.GCACGTGAGATTTTGAggatgttcagccatcacatgtc........................................TTCTTGAG...........A.TCCCGGTTCGATCCCGGG.TACGACCT tRNA-Gln-TTG-1-1 Sc: 56.1
Glu tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>...............................................................................<<<<<...............>>>>>.......<<<<<<<<<<<<. GGCTAGATGGTCTAGTGGT.A.AGATGTCCGTCTCTCAattatcaaccggttttggatagctccaaactcgccttcggcaagcccccgagtttgaggttgagaacc....GACGGGAG...........ACTCCAGTTCGAACCTGGGTCTGGCCA tRNA-Glu-CTC-2-1 Sc: 48.5 GGCCCGATGGTCTAGCGGTtA.AGACTTCCGTCCCTCAgttgatcaaccaatcttggataccttcaggctcacaccttggatatctcgagtctgcggttgattgaggaacGATGGAGA...........ACTCCAGTTCGAATCTGGATCGGGCCA tRNA-Glu-CTC-1-1 Sc: 39.5 >>>>>>>..>>>>.........<<<<..>>>>...............................................................................<<<<................>>>>>.......<<<<<<<<<<<<. TCCGAACTGGTGTATCGGT.A.ACATATCCGCCTCTCAtgatcattgatcagaacc......................................................CGCGGTTG...........CGCGGGGTTCGACTCCCCGGTTCGGAA tRNA-Glu-CTC-3-1 Sc: 37.3 TCCGAACTGGTGTATCGGT.A.ACATATCCGCCTCTCAccattcgaaagaattatgaatc..................................................CGCGGTTG...........CGCGGGGTTCGACTCCCCGGTTCGGAA tRNA-Glu-CTC-3-3 Sc: 37.2 TCCGAACTGGTGTATCGGT.A.ACATATCCGCCTCTCAccattcgaaagaattatgaatc..................................................CGCGGTTG...........CGCGGGGTTCGACTCCCCGGTTCGGAA tRNA-Glu-CTC-3-5 Sc: 37.2 TCCGAACTGGTGTATCGGT.A.ACATATCCGCCTCTCAccatttcgaaagaattatgaatc.................................................CGCGGTTG...........CGCGGGGTTCGACTCCCCGGTTCGGAA tRNA-Glu-CTC-3-2 Sc: 37.1 TCCGAACTGGTGTATCGGT.A.ACATATCCGCCTCTCAatattcgagtttcgcttgaaaagattc.............................................CGCGGTTG...........CGCGGGGTTCGACTCCCCGGTTCGGAA tRNA-Glu-CTC-3-4 Sc: 37.0 >>>>.>>..>>>>.........<<<<.>>.>>...............................................................................<<.<<...............>>>>>.......<<<<<<<.<<<<. GGCTCGATGGTCTAGTGGT.A.AGATGCCCGTCTCTCAattatcgaccggttttggatacatccaaactcgccttcggcaagcccccgagtttgaggttgagaacc....GACAGGAG...........ACTCCAGTTCGAATCTGGGTCTGGCCA tRNA-Glu-CTC-4-1 Sc: 36.4 >>>>>>>..>>>>.........<<<<.>>>>>...............................................................................<<<<<...............>>>>>.......<<<<<<<<<<<<. TCCGGTATAGTGTAGGGGTtA.ACATAACCCGCTTTCAaattcggag...............................................................CCGGGTAG...........CCCCGGGTTCGATTCCCGGTACCGGAA tRNA-Glu-TTC-1-2 Sc: 59.5 TCCGGTATAGTGTAGGGGTtA.ACATAACCCGCTTTCAaagactttggag............................................................CCGGGTAG...........CCCCGGGTTCGATTCCCGGTACCGGAA tRNA-Glu-TTC-1-1 Sc: 59.4
Gly tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.........................................................<<<<<...............>>>>>.......<<<<<<<<<<<<. GCATCAGTGGTTTAGTGGT.A.AAATCCATCGTTGCCA..................................................TCGATGGG...........CCCCGTGTTCGATTCACGGCTGATGCA tRNA-Gly-GCC-1-1 Sc: 59.1 GCATCAGTGGTTTAGTGGT.A.AAATCCATCGTTGCCA..................................................TCGATGGG...........CCCCGTGTTCGATTCACGGCTGATGCA tRNA-Gly-GCC-1-2 Sc: 59.1 GCATCAGTGGTTTAGTGGT.A.AAATCCATCGTTGCCA..................................................TCGATGGG...........CCCCGTGTTCGATTCACGGCTGATGCA tRNA-Gly-GCC-1-3 Sc: 59.1 GCATCAGTGGTTTAGTGGT.A.AAATCCATCGTTGCCA..................................................TCGATGGG...........CCCCGTGTTCGATTCACGGCTGATGCA tRNA-Gly-GCC-1-4 Sc: 59.1 >>>>>>>..>>>>.........<<<<.>>>>>.........................................................<<<<<...............>>>>>.......<<<<<<<<<<<<. GCGTCGATAGTTTAAGGGT.A.GAATGTGAGCTTCCCAgtctctagaaatagctggggtctgcggtaacgtggacttcaaaccctgttTGCTCACG...........GTCCGGGTTCGAGTCCCGGTCGACGCA tRNA-Gly-CCC-1-1 Sc: 58.9 >>..>>>..>>>>.........<<<<.>>>>>.........................................................<<<<<...............>>>>>.......<<<<<<<<..<<. GCTTCTGTGGTCCAATGGTtA.GGATTCCACCCTTCCA..................................................AGGTGGAG...........GTTCGTGTTCGATTCACGGCAGTTGCA tRNA-Gly-TCC-1-1 Sc: 53.8 GCTTCTGTGGTCCAATGGTtA.GGATTCCACCCTTCCA..................................................AGGTGGAG...........GTTCGTGTTCGATTCACGGCAGTTGCA tRNA-Gly-TCC-1-2 Sc: 53.8 GCTTCTGTGGTCCAATGGTtA.GGATTCCACCCTTCCA..................................................AGGTGGAG...........GTTCGTGTTCGATTCACGGCAGTTGCA tRNA-Gly-TCC-1-3 Sc: 53.8
His tRNAs
>>>>>>>..>>>>........<<<<..>>>>.....................................<<<<................>>>>>.......<<<<<<<<<<<<. GGTGGGATGGTGTAATGGTA.GCACGTGACGTTGTGGtataacatctgttgtaacatacaagc....CCGTTTCA...........ATCTGGGTTCGATTCCCAGTCCCGCCA tRNA-His-GTG-2-1 Sc: 43.8 GGTGGGATGGTGTAATGGTA.GCACGTGACGTTGTGGtataacagtcttctgatataacatgcaatcCCGTTTCA...........ATCTGGGTTCGATTCCCAGTCCCGCCA tRNA-His-GTG-2-2 Sc: 43.6 GGTGGAATGGTGTAATGGTA.GCACGTGACGTTGTGGtataatgctcacccgttgtaacatacaatcCCGTTTCA...........ATCTGGGTTCGATTCCCAGTTCCGCCA tRNA-His-GTG-1-1 Sc: 42.3
Ile tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<. GGTCGCTTAGCTCAGTTGGTtAGAGCGTGGTGCTAATAACGCCAAG...........GtCGCGAGTTCGACCCTCGTAGTGACCA tRNA-Ile-AAT-1-1 Sc: 78.2 GGTCGCTTAGCTCAGTTGGTtAGAGCGTGGTGCTAATAACGCCAAG...........GtCGCGAGTTCGACCCTCGTAGTGACCA tRNA-Ile-AAT-1-2 Sc: 78.2 GGTCGCTTAGCTCAGTTGGTtAGAGCGTGGTGCTAATAACGCCAAG...........GtCGCGAGTTCGACCCTCGTAGTGACCA tRNA-Ile-AAT-1-3 Sc: 78.2 GGTCGCTTAGCTCAGTTGGTtAGAGCGTGGTGCTAATAACGCCAAG...........GtCGCGAGTTCGACCCTCGTAGTGACCA tRNA-Ile-AAT-1-4 Sc: 78.2 GGTCGCTTAGCTCAGTTGGTtAGAGCGTGGTGCTAATAACGCCAAG...........GtCGCGAGTTCGACCCTCGTAGTGACCA tRNA-Ile-AAT-1-5 Sc: 78.2
Leu tRNAs
>>>>>>>..>>>>...........<<<<.>>>>>...............................................<<<<<..>>>..........<<<...>>>>>.......<<<<<.<<<<<<<. GGACAGATGGCCGAGCTGGTt.A.TGGCGCCAGGTTAAGGttataccttaatatcatgtgattcttcaccttgtgtt...TCCTGGT.CACGA......AAGTGG.CGTGGGTTCGAGTCCCAC.TCTGTTCA tRNA-Leu-AAG-2-1 Sc: 57.4 GGACAGATGGCCGAGATGGTt.A.TGGCGCCAGGTTAAGGttataccttaatacatgtgatatacatcacatagtt....TCCTGGT.CACGA......AAGTGG.CGTGGGTTCGAGTCCCAC.TCTGTTCA tRNA-Leu-AAG-1-1 Sc: 54.6 GGACAGATGGCCGAGATGGTt.A.TGGCGCCAGGTTAAGGttataccttaatacatgtgatttatcatatagtt......TCCTGGT.CACGA......AAGTGG.CGTGGGTTCGAGTCCCAC.TCTGTTCA tRNA-Leu-AAG-1-2 Sc: 54.6 GGACAGATGGCCGAGATGGTt.A.TGGCGCCAGGTTAAGGttgtaccttaatacatgtgattcgtcatatagtt......TCCTGGT.CACGA......AAGTGG.CGTGGGTTCGAGTCCCAC.TCTGTTCA tRNA-Leu-AAG-1-3 Sc: 54.6 >>>>>>>..>>>.............<<<.>>>>>...............................................<<<<<..>>............<<...>>>>>.......<<<<<.<<<<<<<. GGCAACTTGGCCGAGC.GGTt.A.AGGCGCTAGTTTCAGGttatcatgtgact...........................TACTAGT.TCGA........AAGAG.CGAGAGTTCGAATCTCTC.AGTTGTCA tRNA-Leu-CAG-1-1 Sc: 52.2 GGCAACTTGGCCGAGC.GGTt.A.AGGCGCTAGTTTCAGGtcatcatgtgac............................TACTAGT.TCGA........AAGAG.CGAGAGTTCGAATCTCTC.AGTTGTCA tRNA-Leu-CAG-1-2 Sc: 52.2 >>>>>>>..>>>.............<<<.>>>>>...............................................<<<<<..>>............<<...>>>>>.......<<<<<.<<<<<<<. GGGAGTCTGGCCGAGT.GGTt.A.AGGCGCTGTGTTTAGGtcatccgcaaggaaaccttgattc................CCGCAGT.GGGA........AACCG.CGCAGGTTCGAATCCTGC.GGCTCTCA tRNA-Leu-TAG-1-1 Sc: 58.1 >>>>>>>..>>>.............<<<.>>>>>...............................................<<<<<..>>............<<...>>>>>.......<<<<<.<<<<<<<. GGACAGATGGCCGAGC.GGTctA.AGGCGCGTGACTCAAGaacttacaattcttctggtcggttatcaacgcctagtgcaTTCACGTATCGA........AAGATtCGGGGGTTCGAATCCCCC.TCTGTTCA tRNA-Leu-CAA-1-1 Sc: 57.9 GGACAGATGGCCGAGC.GGTctA.AGGCGCGTGACTCAAGaacttacaattcttctggtcgatcattaacgcctagtgcaTTCACGTATCGA........AAGATtCGGGGGTTCGAATCCCCC.TCTGTTCA tRNA-Leu-CAA-1-2 Sc: 57.9 >>>>>>>..>>>.............<<<.>>>>>...............................................<<<<<..>>>..........<<<...>>>>>.......<<<<<.<<<<<<<. GCTCATATGGCCGAGT.GGTctA.AGGCGATGGTTTTAAGaaattcttctgaaa..........................CACCATT.ATCGA......AAGATG.CGTGAGTTCGAACCTCAC.TGTGAGCA tRNA-Leu-TAA-1-1 Sc: 60.8
Lys tRNAs
>>>>>>>..>>>>.........<<<<.>>.>>.....................................<<.<<................>>>>>.......<<<<<<<<<<<<. GCCTGGGTAGCTCAATCGGT.AGAGCGTGTGACTCTTA..............................ATCTCAAG...........GtCGCGGGTTCGAGCCCCGCCTCGGGCT tRNA-Lys-CTT-1-2 Sc: 85.7 GCCTGGGTAGCTCAATCGGT.AGAGCGTGTGACTCTTA..............................ATCTCAAG...........GtCGCGGGTTCGAGCCCCGCCTCGGGCT tRNA-Lys-CTT-1-3 Sc: 85.7 GCCTGGGTAGCTCAATCGGT.AGAGCGTGTGACTCTTA..............................ATCTCAAG...........GtCGCGGGTTCGAGCCCCGCCTCGGGCT tRNA-Lys-CTT-1-4 Sc: 85.7 GCCTGGGTAGCTCAATCGGT.AGAGCGTGTGACTCTTActtcctatccttaggatatgagatc.....ATCTCAAG...........GtCGCGGGTTCGAGCCCCGCCTCGGGCT tRNA-Lys-CTT-1-1 Sc: 77.8 GCCTGGGTAGCTCAATCGGT.AGAGCGTGTGACTCTTActtccttatcttagtatacgagatc.....ATCTCAAG...........GtCGCGGGTTCTAGCCCCGCCTCGGGCT tRNA-Lys-CTT-2-1 Sc: 69.1 >>>>>>>..>>.>.........<.<<.>>>>>.....................................<<<<<................>>>>>.......<<<<<<<<<<<<. GCCCTGCTGGCACAATTGGTtAGCGCGTGGGCCTTTTAtgcagatgattcgtcgtcagctaaaagacaAGCCCAAG...........GtTCAGGGTTCGAGACCCTGGTGGGGCG tRNA-Lys-TTT-1-1 Sc: 64.4
Met tRNAs
>>>>>>>..>>>>..........<<<<.>>>>..................................................<<<<................>>>>>.......<<<<<<<<<<<<. GTCTTCATGGCTCAGTTGGTtA.GAGCGTTGGTCTCATActtcttgtatgacgtaactgtcaaacagtcatgtgattgccATCCAAAG...........GtCGTGAGTTCGAACCTCACTGAGGACA tRNA-Met-CAT-1-1 Sc: 79.5 GCTTTCGTGGCTCAGTTGGCtA.GAGCGTTGGTCTCATAtgttgaatatgacgtgattgataaacaatcatgtgatgac.ATCCAAAG...........GtCGCAAGTTCGAGCCTTGCCGAGAGCA tRNA-Met-CAT-2-1 Sc: 73.4 >>>>>>>..>>>>..........<<<<.>>>>>................................................<<<<<................>>>>>.......<<<<<<<<<<<<. AGCAATTTGGCGCAGC.GGA.A.GCGCGCCGGGCTCATA.........................................ACCCGGAG...........GtCGCATGATCGAAACATGCAATTGCTA tRNA-iMet-CAT-1-1 Sc: 63.4 AGCAATTTGGCGCAGC.GGA.A.GCGCGCCGGGCTCATA.........................................ACCCGGAG...........GtCGCATGATCGAAACATGCAATTGCTA tRNA-iMet-CAT-1-2 Sc: 63.4 AGCAATTTGGCGCAGC.GGA.A.GCGCGCCGGGCTCATA.........................................ACCCGGAG...........GtCGCATGATCGAAACATGCAATTGCTA tRNA-iMet-CAT-1-3 Sc: 63.4
Phe tRNAs
>>>>>>>..>>>>........<<<<.>>>>>........................<<<<<................>>>>>.......<<<<<<<<<<<<. GCGGCTTTAGCTCACTTGGGAGAGCGCCAGACTGAAGataacttcggttcgat.ATCTGGAG...........GcACTGTGTTCGATCCACAGAAGCCGCA tRNA-Phe-GAA-1-2 Sc: 59.5 GCGGCTTTAGCTCACTTGGGAGAGCGCCAGACTGAAGacaacttcggttcgat.ATCTGGAG...........GcACTGTGTTCGATCCACAGAAGCCGCA tRNA-Phe-GAA-1-3 Sc: 59.5 GCGGCTTTAGCTCACTTGGGAGAGCGCCAGACTGAAGacaacttcagctccgatATCTGGAG...........GcACTGTGTTCGATCCACAGAAGCCGCA tRNA-Phe-GAA-1-1 Sc: 59.4
Pro tRNAs
>>>>>>>..>>>..........<<<.>>>>>..........................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGTCTTGTGGTCTAGTGGTA.TGATTCTCGCTTAGGGtccaccctacagcaatgtt................TGCGAGAG...........GtCCCCGATTCGATCTCGGGCAAGACCC tRNA-Pro-AGG-1-1 Sc: 53.5 GGTCTTGTGGTCTAGTGGTA.TGATTCTCGCTTAGGGtacaccctacagcaatgtt................TGCGAGAG...........GtCCCCGATTCGATCTCGGGCAAGACCC tRNA-Pro-AGG-1-2 Sc: 53.5 GGTCTTGTGGTCTAGTGGTA.TGATTCTCGCTTAGGGctcaccctacagctacaatt...............TGCGAGAG...........GtCCCCGATTCGATCTCGGGCAAGACCC tRNA-Pro-AGG-1-3 Sc: 53.4 >>>>>>>..>>>..........<<<.>>>>>..........................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGCTCAATGGTCTAGTCGTA.TGATTGTTGCTTCGGGattcatcccctgttctcaaagaacagatgcttgaaTGTGACAG...........GtCCCGGGTTCAAATCCCGGTTGAGCCC tRNA-Pro-CGG-1-1 Sc: 43.0 >>>>>>>..>>>>........<<<<.>>>>>..........................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGCCTGATAGTTCAGTGGTA.GAATTCTTGCTTTGGGagcgattcagcattcaaat................TGTAAGAG...........GtCTCCGGTTCGATCCCGGATTAGGCCC tRNA-Pro-TGG-2-1 Sc: 59.8 GGCCTGATAGTTCAGTGGTA.GAATTCTTGCTTTGGGagctcatcagcattcaaat................TGTAAGAG...........GtCTCCGGTTCAATCCCGGATTAGGCCC tRNA-Pro-TGG-1-1 Sc: 58.7
SeC tRNAs
Ser tRNAs
>>>>>>>..>>>...........<<<.>>>>>............................................<<<<<..>>>>.........<<<<..>>>>>.......<<<<<.<<<<<<.<. GGCGTGTTGCCAGAGTGGTtA.ATGGGTATGACTAGAA.....................................ATCATAT.GGTTTC.......GGCCGCGTAGGTTCAAATCCTGC.ACACGT.CG tRNA-Ser-AGA-1-1 Sc: 68.6 GGCGTGTTGCCAGAGTGGTtA.ATGGGTATGACTAGAA.....................................ATCATAT.GGTTTC.......GGCCGCGTAGGTTCAAATCCTGC.ACACGT.CG tRNA-Ser-AGA-1-2 Sc: 68.6 GGCGTGTTGCCAGAGTGGTtA.ATGGGTATGACTAGAA.....................................ATCATAT.GGTTTC.......GGCCGCGTAGGTTCAAATCCTGC.ACACGTtCG tRNA-Ser-AGA-2-1 Sc: 61.5 >>>>>>>..>>>...........<<<.>>>>>............................................<<<<<..>>>>.........<<<<..>>>>>.......<<<<<.<<<<<<.<. GGCGTGGTGCCAGAGTGGTtA.ATGGGTATGACTCGAAtgtttcaatgcgat.......................ATCATAT.GGTTTC.......GGCCGCGTAGGTTCAAATCCTGC.CCACGT.CG tRNA-Ser-CGA-1-1 Sc: 62.7 ATCGTGGTGCCAGAGTGGTtA.ATGGGTATGACTCGAAtgctttaatgcgatagat...................ATCATAT.GGCTTC.......GGCCGCGTAGGTTCAAATCCTGC.CCACGA.TG tRNA-Ser-CGA-2-1 Sc: 61.0 >>>>>>>..>>>...........<<<.>>>>>............................................<<<<<..>>>>.........<<<<..>>>>>.......<<<<<.<<<<<<.<. GGCGTGTTGCCAGAGCGGTtA.ATGGGTAAGACTTGAAttaatttggat..........................ATCTTAT.GACTTC.......GGTCGCGCAGGTTCGAACCCTGC.ACACGT.CG tRNA-Ser-TGA-1-1 Sc: 60.2 >>>>>.>..>>>>.........<<<<.>>>>>............................................<<<<<.....................>>>>>.......<<<<<.<.<<<<.<. GTGGTACTGGCGTAGTGGTaA.ACGCATCTGGCTACTTcgcaagaaggagaattcaattaattgaatctcacagtCCCAGGAG.................ACAGCGGTTCGAATCCGTT.GCACTA.CA tRNA-Ser-ACT-1-1 Sc: 42.7 >>>>>>>..>>>...........<<<.>>>>>............................................<<<<<..>>>>.........<<<<..>>>>>.......<<<<<.<<<<<<.<. GGCACTTTGGCGGAGTGGTtA.ACGCGATGCCCTGCTAtctacatcacgtggaagtc..................AGGCATT.TCCTTC.......GGGAGCGAGTGTTCGAATCACTC.AGGTGT.CG tRNA-Ser-GCT-1-1 Sc: 55.1 GGCACTTTGGCGGAGTGGTtA.ACGCGATGCCCTGCTAtttccataggaagtattt...................AGGCATT.TCCTTC.......GGGAGCGAGTGTTCGAATCACTC.AGGTGT.CG tRNA-Ser-GCT-1-2 Sc: 55.1
Sup tRNAs
>>>>>>>..>>.>........<.<<.>>>>>......................................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGCCTTATAGTATAATGGTA.GCATCCCTAGTTCTAA...............................................................ACTAGGGG...........GtTATGGGTTTAACCCCCATTAAGGCCT tRNA-Sup-CTA-1-1 Sc: 46.8
Thr tRNAs
>>>>.>>..>>>>.........<<<<.>>>>>.............................................<<<<<................>>>>>.......<<<<<<<.<<<<. GCCCCCATAGCTCAGTTGGTA.GAGCGCGGCACTAGTAcgattcatggtcacgtgatacctcgtt...........ATGCCGAG...........GtCTTCAGTTCGACTCTGAATGTGGGCA tRNA-Thr-AGT-1-1 Sc: 63.8 GCCCCCATAGCTCAGTTGGTA.GAGCGCGGCACTAGTAcgattcatgtcatatgagatcacgtg............ATGCCGAG...........GtCTACGGTTCAACTCCGTATGTGGGCA tRNA-Thr-AGT-3-1 Sc: 63.6 GCCCCCATAGCTCAGTTGGTA.GAGCGCGGCACTAGTAtaattcatggtcacatgatacatcgtg...........ATGCCGAG...........GtCTTCAGTTCAACTCTGAATGTGGGCA tRNA-Thr-AGT-2-1 Sc: 62.8 GCCCCCATAGCTCAGTTGGTA.GAGCGCGGCACTAGTAcgattcaagatcacatgatacattgtg...........ATGCCGAG...........GtCTTCAGTTCAACTCTGAATGTGGGCA tRNA-Thr-AGT-2-2 Sc: 62.8 >>>>>>>..>>>>.........<<<<.>>..>.............................................<..<<................>>>>>.......<<<<<<<<<<<<. GCTCTCGTAGCTCAGTTGGTA.GAGTGCGGCACTAGTAagatatggtgatcatgtg....................ATAACGTG...........GtCTACGGTTCAAATCCGTATGGGAGCA tRNA-Thr-AGT-4-1 Sc: 50.7 >>>>>>>..>>>...........<<<.>>>>>.............................................<<<<<................>>>>>.......<<<<<<<<<<<<. GCCCGTTTGGCTTAGT.GGTA.CAGCGTCTCACTCGTAaaccgaatgtgtccgat.....................ATGAGAAG...........AtCCTCGGTTCGATTCCGAGAATGGGCA tRNA-Thr-CGT-1-1 Sc: 67.8 >>>>>>>..>>>...........<<<.>>>>>.............................................<<<<<................>>>>>.......<<<<<<<<<<<<. GCCGCCATGGCGCAGT.GGTA.ACGCGTCGCACTTGTAccactaagacagtaaactgtctagcaatcta.......ATGCGAAG...........AtCCCTAGTTCAATTCTGGGTGGCGGCA tRNA-Thr-TGT-1-1 Sc: 72.1 GCCGCTATGGCGCAGT.GGTA.ACGCGTCGCACTTGTAccatttggacagaacaaaactgtctttcatgtcgtgaaATGCGAAG...........AtCCCTAGTTCAATTCTGGGTGGCGGCA tRNA-Thr-TGT-2-1 Sc: 69.6
Trp tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<. GGACCGCTGGCGCAACGGTA.GCGCGTTCGCCTCCAGAGCGAAAG...........GtTATCCGTTCAAATCGGGTGTGGTTCA tRNA-Trp-CCA-1-1 Sc: 64.2 GGACCGCTGGCGCAACGGTA.GCGCGTTCGCCTCCAGAGCGAAAG...........GtTATCCGTTCAAATCGGGTGTGGTTCA tRNA-Trp-CCA-1-2 Sc: 64.2 GGACTGCTGGCGCAACGGTA.GCGCGTTCGCCTCCAGAGCGAAAG...........GtTATCCGTTCAAATCGGGTGTGGTTCA tRNA-Trp-CCA-2-1 Sc: 61.1
Tyr tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.........................<<<<<................>>>>>.......<<<<<<<<<<<<. CCCTTTGTAGCTCAGTTGGAttAGAGCATCGGACTGTAAttgcaaaacacacacctcATCCGGGG...........GcCCCCGGTTCGATTCCGGGCGAAGGGA tRNA-Tyr-GTA-2-1 Sc: 70.7 CCCTTTGTAGCTCAGTTGGAttAGAGCATCGGACTGTAAtgtaacgcaaacc.....ATCCGGGG...........G.CCCCGGTTCGATTCCGGGCGAAGGGA tRNA-Tyr-GTA-1-2 Sc: 69.7 CCCTTTGTAGCTCAGTTGGAttAGAGCATCGGACTGTAActgtaacaacaatc....ATCCGGGG...........G.CCCCGGTTCGATTCCGGGCGAAGGGA tRNA-Tyr-GTA-1-1 Sc: 69.6
Val tRNAs
>>>>>>>..>>>............<<<.>>>>>............................<<<<<................>>>>>.......<<<<<.<<<<<<<. GGCCGGGTGGTGTAGTTGGTtA.TCACGTTTCGTTAACAtttcaaatgta..........CCGAAAAG...........GtCCTGGGATCGAACCCCAG.CCTGGTCA tRNA-Val-AAC-1-1 Sc: 68.6 GGCCGGGTGGTGTAGTTGGTtA.TCACGTTTCGTTAACAtttcaatatgtc.........CCGAAAAG...........GtCCTGGGATCGAACCCCAG.CCTGGTCA tRNA-Val-AAC-1-2 Sc: 68.6 GGCCGGGTGGTGTAGTTGGTtA.TCACGTTTCGTTAACAtttcaaatgta..........CCGAAAAG...........GtCCTGGGATCGAACCCCAG.CCTGGTCA tRNA-Val-AAC-1-3 Sc: 68.6 GGCCGGGTGGTGTAGTTGGTtA.TCACGTTTCGTTAACAtttctaatgta..........CCGAAAAG...........GtCCTGGGATCGAACCCCAG.CCTGGTCA tRNA-Val-AAC-1-4 Sc: 68.6 >>>>>>>..>>>............<<<.>>>>>............................<<<<<................>>>>>.......<<<<<.<<<<<<<. GGTCGCGTGGTCTAAT.GGTtA.TGACGTTTCGCTCACAaagtatcattaaatatgatatCCGAAAAG...........GtTCCGAGTTCGATCCTCGG.CGTGACCT tRNA-Val-CAC-1-1 Sc: 65.9 >>>>>....>>>............<<<.>>>>>............................<<<<<................>>>>>.......<<<<<...<<<<<. GGTCGCGTGGTCTAAT.GGTtA.TGAC.TTTCGCTCACAaagtatcattaaatatgatatCCGAAAAG...........GtTCCGAGTTCGATCCTCGG.GTTGACCT tRNA-Val-CAC-2-1 Sc: 38.9 >>>>>>>..>>>............<<<.>>>>>............................<<<<<................>>>>>.......<<<<<.<<<<<<<. GGACGATTAGTGTAGT.GGTtA.TCACGTTTCCTTTACAaagtcatcagacg........CGGAAAAG...........GtCGCAGGTTCGATCCCTGC.ATCGTTCA tRNA-Val-TAC-1-1 Sc: 67.4