tRNA Gene Summary

Overview
tRNAs decoding standard 20 AA 121
Selenocysteine tRNAs (TCA) 0
Possible suppressor tRNAs (CTA,TTA,TCA) 2
tRNAs with undetermined or unknown isotypes 0
Predicted pseudogenes 1
Total tRNAs 124
Intron Summary (tRNAs with introns: 84)
Ala AGC
4
Ala CGC
1
Ala TGC
2
Gly CCC
1
Pro AGG
3
Pro CGG
1
Pro TGG
2
Thr AGT
5
Thr CGT
1
Thr TGT
2
Val AAC
4
Val CAC
2
Val TAC
1
Ser CGA
2
Ser TGA
1
Ser ACT
1
Ser GCT
2
Arg CCG
2
Arg TCG
1
Arg TCT
3
Leu AAG
4
Leu CAG
2
Leu TAG
1
Leu CAA
2
Leu TAA
1
Phe GAA
3
Asn GTT
1
Lys CTT
2
Lys TTT
1
Asp GTC
4
Glu CTC
8
Glu TTC
2
His GTG
3
Gln CTG
1
Gln TTG
2
Met CAT
2
Tyr GTA
3
Supres TCA
1
 

The codon usage of this genome was generated from protein-coding genes annotated in GenBank or RefSeq.
Number of CDS: 0
Number of Codons: 113858

Four Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
Codon Usage (Percentage)
AlaAGC
6
GGC
 
CGC
3
TGC
2
11
GCT
0
GCC
0
GCG
0
GCA
0
0%
GlyACC
 
GCC
4
CCC
1
TCC
3
8
GGT
0
GGC
0
GGG
0
GGA
0
0%
ProAGG
3
GGG
 
CGG
1
TGG
2
6
CCT
0
CCC
0
CCG
0
CCA
0
0%
ThrAGT
5
GGT
 
CGT
1
TGT
2
8
ACT
0
ACC
0
ACG
0
ACA
0
0%
ValAAC
4
GAC
 
CAC
2
TAC
1
7
GTT
0
GTC
0
GTG
0
GTA
0
0%
Six Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
Codon Usage (Percentage)
SerAGA
3
GGA
 
CGA
2
TGA
1
ACT
1
GCT
2
 
 
 
 
9
TCT
0
TCC
0
TCG
0
TCA
0
AGT
0
AGC
0
 
 
 
 
0%
ArgACG
4
GCG
 
CCG
2
TCG
1
 
 
 
 
CCT
1
TCT
3
11
CGT
0
CGC
0
CGG
0
CGA
0
 
 
 
 
AGG
0
AGA
0
0%
LeuAAG
4
GAG
 
CAG
2
TAG
1
 
 
 
 
CAA
2
TAA
1
10
CTT
0
CTC
0
CTG
0
CTA
0
 
 
 
 
TTG
0
TTA
0
0%
Two Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
Codon Usage (Percentage)
PheAAA
 
GAA
3
 
 
 
 
3
TTT
0
TTC
0
 
 
 
 
0%
AsnATT
 
GTT
3
 
 
 
 
3
AAT
0
AAC
0
 
 
 
 
0%
Lys 
 
 
 
CTT
5
TTT
1
6
 
 
 
 
AAG
0
AAA
0
0%
AspATC
 
GTC
4
 
 
 
 
4
GAT
0
GAC
0
 
 
 
 
0%
Glu 
 
 
 
CTC
8
TTC
2
10
 
 
 
 
GAG
0
GAA
0
0%
HisATG
 
GTG
3
 
 
 
 
3
CAT
0
CAC
0
 
 
 
 
0%
Gln 
 
 
 
CTG
2
TTG
2
4
 
 
 
 
CAG
0
CAA
0
0%
Two Box and Other tRNA Sets
IsotypetRNA Count by AnticodonTotal
Codon Usage (Percentage)
IleAAT
5
GAT
 
 
 
TAT
 
5
ATT
0
ATC
0
 
 
ATA
0
0%
iMet/Met 
 
 
 
CAT
3/2
 
 
5
 
 
 
 
ATG
0
 
 
0%
TyrATA
 
GTA
3
 
 
 
 
3
TAT
0
TAC
0
 
 
 
 
0%
Supres 
 
TCA
1
CTA
1
TTA
 
2
Stop 
 
TGA
0
TAG
0
TAA
0
0%
CysACA
 
GCA
3
 
 
 
 
3
TGT
0
TGC
0
 
 
 
 
0%
Trp 
 
 
 
CCA
3
 
 
3
 
 
 
 
TGG
0
 
 
0%
SelCys 
 
 
 
 
 
TCA
 
0
 
 
 
 
 
 
 
 
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