Structurally Aligned tRNAs (by Isotype & Anticodon)

Structural alignments are generated by aligning tRNA sequences against domain-specific tRNA covariance models with the use of COVE.

Ala tRNAs
>>>.>>>>......>>>>..........<<<<.>>>>>........................................<<<<<................>>>>>............<<<<<<<<<<<<. GGG.GGTT....TAGCTCAGTTGGT.A.GAGCGTTCGCTTAGCAtcttgaggtgtctaact................TGCGAAAG...........GtCGCGTGTTCGACT.....CATGCAGTCTCCA tRNA-Ala-AGC-1-1 Sc: 61.1 GGG.GGTT....TAGCTCAGTTGGT.A.GAGCGTTCGCTTAGCAtcttgaggtgtctaact................TGCGAAAG...........GtCGCGTGTTCGACT.....CATGCAGTCTCCA tRNA-Ala-AGC-1-2 Sc: 61.1 GGG.GGTT....TAGCTCAGTTGGT.A.GAGCGTTCGCTTAGCAtctagaggtgtctaact................TGCGAAAG...........GtCGCGTGTTCGACT.....CATGCAGTCTCCA tRNA-Ala-AGC-1-3 Sc: 61.1 GGG.GGTT....TAGCTCAGTTGGT.A.GAGCGTTCGCTTAGCAtctcgaggtgtctaact................TGCGAAAG...........GtCGCGTGTTCGACT.....CATGCAGTCTCCA tRNA-Ala-AGC-1-4 Sc: 61.1 GGG.GGTT....TAGCTCAGTTGGT.A.GAGCGTTCGCTTAGCAtctcgaggtgtctaact................TGCGAAAG...........GtCGCGTGTTCGACT.....CATGCAGTCTCCA tRNA-Ala-AGC-1-5 Sc: 61.1 >>>.>>>>......>>>............<<<.>>>>>........................................<<<<<................>>>>>............<<<<<<<<<<<<. GGG.AATA....TGGTCTAGT.GGT.A.TGACGTCGCTTCCGCAtacctagagcccttataagttcgcgggtccgtaAAGCGAAG...........GtCCGGGGTTCGATC.....CCCTGTGTTTCCA tRNA-Ala-CGC-1-1 Sc: 56.5 >>>.>>>>......>>>>..........<<<<.>>>>>........................................<<<<<................>>>>>............<<<<<<<<<<<<. GGG.GATA....TAGCTCAGT.GGT.A.GAGCGTCTCGTTTGCAttagtaaatccaaatc.................TCGAGAAG...........GtCTGGGGTTCAATC.....CCCCATGTCTCCA tRNA-Ala-TGC-1-1 Sc: 65.1 GGG.GGTT....TAGCTCAGTTGGT.A.GAGCGTTCGCTTTGCAccgctctcgagtagttgttttgtcttc......TGCGAAAT...........GtCGCGTGTTCGACT.....CATGCAGTCTCCA tRNA-Ala-TGC-2-1 Sc: 56.6 >>>.>>>>......>>>>..........<<<<.>.>>>........................................<<<.<................>>>>>............<<<<<<<<<<<<. GGG.GGCA....TAGTATAGTTGGTcA.GTATACTTCCTTTGCA.................................AGGATGGG...........A.GACAGGTTCGAGT.....CCTGTTGCCTCCA tRNA-Ala-TGC-3-1 Sc: 51.7 >>>.>>>>......>>>>..........<<<<.>>>>>........................................<<<<<.................>>>>............<<<<.<<<<<<<. GACaTGGAgataTAGCTCAGT.GGT.A.GAGCGTCTCGTTTGCAttagtaaatccaaatc.................TCGAGGAG...........GtACCGGGTTCAATCcaactCTCGTTCCAGTCG tRNA-Ala-TGC-4-1 Sc: 27.6
Arg tRNAs
>>>>>>>..>>>............<<<.>>>>>......................................................<<<<<.................>>>>>.......<<<<<<<<<<<<. GGCCGGTTGGCCCAAT.GGT.A.AGGCGTCTGACTACGAagtcccttcggaccttgaca...........................ATCAGGAG...........At.TCTGGGTTCGAGCCCCAGGCTGGTCA tRNA-Arg-ACG-1-3 Sc: 62.9 GGCCGGTTGGCCCAAT.GGT.A.AGGCGTCTGACTACGAatgtgtataattcggcta.............................ATCAGGAG...........At.TCTGGGTTCGAGCCCCAGGCTGGTCA tRNA-Arg-ACG-1-4 Sc: 62.9 GGCCGGTTGGCCCAAT.GGT.A.AGGCGTCTGACTACGAcgaaagcatccattgtgagcgctggta....................ATCAGGAG...........At.TCTGGGTTCGAGCCCCAGGCTGGTCA tRNA-Arg-ACG-1-1 Sc: 62.6 GGCCGGTTGGCCCAAT.GGT.A.AGGCGTCTGACTACGAagcaacctcggaggtaaacactgggcagttgtgagtta.........ATCAGGAG...........At.TCTGGGTTCGAGCCCCAGGCTGGTCA tRNA-Arg-ACG-1-2 Sc: 62.2 >>>>>>>..>>>>..........<<<<.>>>>>......................................................<<<<<.................>>>>>.......<<<<<<<<<<<<. GGGTCTTTAGCTCAGC.AGT.A.GAGCGGCAGACTTCGGtttcaacctgaaggttccttcgggta.....................TTCTGCAG...........Gt.CGCGGGTTCAATCCCCGTAGGACTCT tRNA-Arg-TCG-2-3 Sc: 55.3 GGGTCTTTAGCTCAGC.AGT.A.GAGCGGCAGACTTCGGtgcaaattctgaagctacgttttccaacgttta..............TTCTGCAG...........Gt.CGCGGGTTCAATCCCCGTAGGACTCT tRNA-Arg-TCG-2-2 Sc: 55.1 GGGTCTTTAGCTCAGC.AGT.A.GAGCGGCAGACTTCGGtagaaattctgaagctacgtcttaacagtcgttta............TTCTGCAG...........Gt.CGCGGGTTCAATCCCCGTAGGACTCT tRNA-Arg-TCG-2-1 Sc: 55.0 >>>>>>>..>>>............<<<.>>>>>......................................................<<<<<.................>>>>>.......<<<<<<<<<<<<. GCATACTTAGCTAAATTGGT.A.AAGCGCCTAACTTCGG...............................................ATTAGGAG...........AttTAGGGGTTCGAGCCCTCTAGTGTGCT tRNA-Arg-TCG-1-1 Sc: 53.5 >>>>>>>..>>>>..........<<<<.>>>>>......................................................<<<<<.................>>>>>.......<<<<<<<<<<<<. GCGCTCTTGGCGTAGT.GGT.A.GCGCGTGTCTCTCCTActctcatccgtaagaacgataactcgtaggatctctgttgttac...AAGACGAG...........Gt.CGTGGGTTCGACCCCCACAGGGCGCT tRNA-Arg-CCT-1-1 Sc: 64.4 >>>>.>>..>>>>..........<<<<.>>>>>......................................................<<<<<.................>>>>>.......<<<<<<<.<<<<. GGCGTCGTGGCGCAAT.GGCtA.GCGCATAGAGCTTCTAtccatttctgaaagccaccggaggagtcctccgaattttaagaaataACTCTAAG...........Gc.TGCGGGTTCGAGTCCCGCCGTCGCCT tRNA-Arg-TCT-1-1 Sc: 61.3
Asn tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<. GGCTCCATAGCTCAGTTGGTtA.GAGCGTAGCACTGTTAATGCTGAG...........GtCGGCGGTTCGAGCCCGCCTGGGGTCG tRNA-Asn-GTT-1-1 Sc: 81.0 GGCTCCATAGCTCAGTTGGTtA.GAGCGTAGCACTGTTAATGCTGAG...........GtCGGCGGTTCGAGCCCGCCTGGGGTCG tRNA-Asn-GTT-1-2 Sc: 81.0 GGCTCCATAGCTCAGTTGGTtA.GAGCGTAGCACTGTTAATGCTGAG...........GtCGGCGGTTCGAGCCCGCCTGGGGTCG tRNA-Asn-GTT-1-3 Sc: 81.0 GGTACTATAACATAGT.GGT.A.ATGTGGCGTACTGTTAATACGTTT...........AaCGAAAGTTCGATTCTTTCTAGTGCCT tRNA-Asn-GTT-2-1 Sc: 48.5
Asp tRNAs
>>>>>>>..>>>...........<<<.>>>>>.....................................<<<<<...............>>>>>.......<<<<<<<<<<<<. TCCGAATTAGTTTAGTGGCtA.TGACGGCGCCTTGTCAttcaattgacgcttctccgcgcagaaat..CGGCGCAG...........ACCCGGGTTCAATTCCCGGATTCGGAG tRNA-Asp-GTC-1-1 Sc: 53.2 TCCGAATTAGTTTAGTGGCtA.TGACGGCGCCTTGTCAttcagttgacgcttctccgcgcagaaat..CGGCGCAG...........ACCCGGGTTCAATTCCCGGATTCGGAG tRNA-Asp-GTC-1-3 Sc: 53.2 TCCGAATTAGTTTAGTGGCtA.TGACGGCGCCTTGTCAttcagttgacgcttctccgcgcagaaat..CGGCGCAG...........ACCCGGGTTCAATTCCCGGATTCGGAG tRNA-Asp-GTC-1-4 Sc: 53.2 TCCGAATTAGTTTAGTGGCtA.TGACGGCGCCTTGTCAattcagtttgacgcttctccgcgcagaaatCGGCGCAG...........ACCCGGGTTCAATTCCCGGATTCGGAG tRNA-Asp-GTC-1-2 Sc: 53.1
Cys tRNAs
>>>>>>>..>>>..........<<<.>>>>>..........................................<<<<<................>>>>>.......<<<<<<<<<<<<. GTGGGAGAGGCTTAGTGGTT.TGGCGTGAGATTGCAAcgtatctgtgaacagagcggcgccctagaat....ATCTTGAG...........GtCGTGGGTTCGATTCCCACCTTCCACT tRNA-Cys-GCA-1-1 Sc: 52.1 GTGGGAGAGGCTTAGTGGTT.TGGCGTGAGATTGCAAcgtatcttttccggagagcggcgccctatgaaaacATCTTGAG...........GtCGTGGGTTCGATTCCCACCTTCCACT tRNA-Cys-GCA-1-2 Sc: 51.9
Gln tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>................................................<<<<<...............>>>>>.......<<<<<<<<<<<<. GGTTGTATGGAGTAGTTGGTtA.ACTTAGGAGATTCTGAcgtgtgggtgcactcccacatttgac...............TTCTCTTG...........CCCTGGGTTCGAATCCCAGTACGACCT tRNA-Gln-CTG-1-2 Sc: 55.7 GGTTGTATGGAGTAGTTGGTtA.ACTTAGGAGATTCTGAtctttccgtctaggaagtagattcgatac............TTCTCTTG...........CCCTGGGTTCGAATCCCAGTACGACCT tRNA-Gln-CTG-1-3 Sc: 55.6 GGTTGTATGGAGTAGTTGGTtA.ACTTAGGAGATTCTGAttgtatgagctcgtcttgcgctcacatcaatacgattcgacTTCTCTTG...........CCCTGGGTTCGAATCCCAGTACGACCT tRNA-Gln-CTG-1-1 Sc: 55.2 >>>>>>>..>>>>..........<<<<.>>>>>................................................<<<<<...............>>>>>.......<<<<<<<<<<<<. GGTTGTATGGAGTAGT.GGTcA.ACTTAGGAGATTTTGAcatagcatctgcgccttcaggcgcaatctcgtcagacc...TTCTCTTG...........CCCCGGGTTCGAATCCCGGTACGACCT tRNA-Gln-TTG-1-1 Sc: 55.4
Glu tRNAs
>>>>.>>..>>>>.........<<<<.>>>>>.....................................<<<<<...............>>>>>.......<<<<<<<.<<<<. TCCCAGTTAGTACAATGGTtA.GTATAGGGCACTCTCA..............................CTGCTCAG...........ATCAGGGTTCGATTCCCTGGCCGGGAA tRNA-Glu-CTC-1-2 Sc: 47.0 TCCCAGTTAGTACAATGGTtA.GTATAGGGCACTCTCA..............................CTGCTCAG...........ATCAGGGTTCGATTCCCTGGCCGGGAA tRNA-Glu-CTC-1-4 Sc: 47.0 TCCCAGTTAGTACAATGGTtA.GTATAGGGCACTCTCAgactggctcctttcagccacatcaa.....CTGCTCAG...........ATCAGGGTTCGATTCCCTGGCCGGGAA tRNA-Glu-CTC-1-3 Sc: 39.1 TCCCAGTTAGTACAATGGTtA.GTATAGGGCACTCTCAgaacctgatggacttgaaccttcagtgctaCTGCTCAG...........ATCAGGGTTCGATTCCCTGGCCGGGAA tRNA-Glu-CTC-1-1 Sc: 38.9 >>>>.>>..>>>>.........<<<<.>>>>>.....................................<<<<<...............>>>>>.......<<<<<<<.<<<<. TCCCAGTTAGTACAATGGTcA.GTATACGGCTTTTTCA..............................CAGCTGAG...........ATCGGGGTTCGATTCCCCGGCCGGGAA tRNA-Glu-TTC-1-1 Sc: 47.3 >>>>>>>..>>>>.........<<<<.>>>>>.....................................<<<<<...............>>>>>.......<<<<<<<<<<<<. GGTCTCTTAGTTTAAAGGT.A.AAACAGTAGATCTTCA..............................TTTTACTA...........ATAGGAGTTCGATTCTCCTAGAGATCA tRNA-Glu-TTC-2-1 Sc: 43.0 >>>>.>>..>>>>.........<<<<.>>>>>.....................................<<<<<...............>>>>>.......<<<<<<<.<<<<. TCCCAGTTAGTACAATGGTcA.GTATACGGCTTTTTCAtcgcgtaaacacgaa...............CAGCTGAG...........ATCGGGGTTCGATTCCCCGGCCGGGAA tRNA-Glu-TTC-1-2 Sc: 39.8
Gly tRNAs
>>>>>>>..>>>...........<<<.>>>>>............................................<<<<<................>>>>>.......<<<<<.<<<<<<<. GCATTGATAGTGTAGGGGT.A.TCATGAGTCGTTGCCActcatcgtctgttcctaggcgtgactaccgat.....TCGACTCG...........A.CCGGGGTTCGAGTCCCCG.TCAATGCA tRNA-Gly-GCC-1-1 Sc: 54.0 GCATTGATAGTGTAGGGGT.A.TCATGAGTCGTTGCCActcatcgtctgccaaagacgtgaaaaccgatt.....TCGACTCG...........A.CCGGGGTTCGAGTCCCCG.TCAATGCA tRNA-Gly-GCC-1-3 Sc: 54.0 GCATTGATAGTGTAGGGGT.A.TCATGAGTCGTTGCCActcatcgtctgccatagacgtgaaaaccgatt.....TCGACTCG...........A.CCGGGGTTCGAGTCCCCG.TCAATGCA tRNA-Gly-GCC-1-4 Sc: 54.0 GCATTGATAGTGTAGGGGT.A.TCATGAGTCGTTGCCAaactcatcgtctgaacaagacgtgtctttaccgatt.TCGACTCG...........A.CCGGGGTTCGAGTCCCCG.TCAATGCA tRNA-Gly-GCC-1-2 Sc: 53.9 GCATTGATAGTGTAGGGGT.A.TCATGAGTCGTTGCCAaactcatcgtctgaacaagacgtgtctttaccgatt.TCGACTCG...........A.CCGGGGTTCGAGTCCCCG.TCAATGCA tRNA-Gly-GCC-1-5 Sc: 53.9 >>>>>>>..>>>>.........<<<<.>>>>>............................................<<<<<................>>>>>.......<<<<<.<<<<<<<. GCGTTCATGGTGAAGTGGTtA.TCATATCTCTTTCCCAttttgtgtcatatgaggatgatgcggtgca.......AAGAGGAG...........GcCGCGGGTTCGAACCCCGC.TGGACGCA tRNA-Gly-CCC-1-1 Sc: 56.8 >>>>>>>..>>>>.........<<<<.>>>>>............................................<<<<<................>>>>>.......<<<<<.<<<<<<<. GCACTGATAGTTCAGTGGT.A.GAATTCTTGCCTTCCAtttcacaagggggcacacctgcgccgcaaggcgcgttAGCAAGAG...........G.CAGGGGTTCGATTCCCCT.TCAGTGCA tRNA-Gly-TCC-1-1 Sc: 75.2 GCACTGATAGTTCAGTGGT.A.GAATTCTTGCCTTCCAtttcacaagggggcacacctgcgtcgcaaggcgcgttAGCAAGAG...........G.CAGGGGTTCGATTCCCCT.TCAGTGCA tRNA-Gly-TCC-1-2 Sc: 75.2 GCTAGTGTAGTTTAATGGT.A.AAACTTGGGACTTCCA.....................................CTCTCAC............AtTTTCGGTTCGATTCCGAA.TACTAGTA tRNA-Gly-TCC-2-1 Sc: 49.1
His tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>..........................................<<<<<..................>>>.>.......<.<<<<<<<<<<. GCAGTCTTAGTATAGT.GGTtA.GTACAGCTCGTTGTGGaactgaatcaagttgattcgctttcttcttccgagCCGAGCAG..............ACGGATGTTCGATTCCTCCAGACTGCA tRNA-His-GTG-1-1 Sc: 44.8 >>>>.>>..>>>>..........<<<<..>>>>..........................................<<<<...................>>>>>.......<<<<<<<.<<<<. GTAATACTAGCTTAATTGGT.A.AAGCGCCAATCTGTGG...................................AGTTG.TGTTT...........ATTCCGGTTCAAGTCCGGAGTTTTACC tRNA-His-GTG-2-1 Sc: 34.3
Ile tRNAs
>>>>>>>..>>>............<<<.>>>>>...................................................................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GCTTCGTTAGCGTAGTTGGAttATCGCATCCGTCTAATAcacggtgcctcaggattgaacctgagtcttattatc........................................................AACGGAAG...........GtCACTGGTTCGAGCCCAGTACGGAGCA tRNA-Ile-AAT-1-1 Sc: 66.9 GCTTCGTTAGCGTAGTTGGAttATCGCATCCGTCTAATAcacggtgcactcggtttactgagtccaaaatattacatc.....................................................AACGGAAG...........GtCACTGGTTCGAGCCCAGTACGGAGCA tRNA-Ile-AAT-1-2 Sc: 66.8 GCTTCGTTAGCGTAGTTGGAttATCGCATCCGTCTAATAcacggtgcctcagaatcgactctgagttttctcatattaac...................................................AACGGAAG...........GtCACTGGTTCGAGCCCAGTACGGAGCA tRNA-Ile-AAT-1-3 Sc: 66.7 GCTTCGTTAGCGTAGTTGGAttATCGCATCCGTCTAATAcacacggtgcctcagtttactgagtcgagaatattacttc....................................................AACGGAAG...........GtCACTGGTTCGAGCCCAGTACGGAGCA tRNA-Ile-AAT-1-4 Sc: 66.7 >>>>>>>..>>>............<<<.>>>>>...................................................................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GCTCCGGTGGCCAAGTTGGAt.AAGGCATGTGGCTTATGtgattcagtagccaggcgccagcacgcccgctacgagttcatgatgaggtttcaaatcgcagaaaagattgcttttctaaaaaatttataaaACCGCGAG...........AtCGTGGGTTCGAGTCCCACCCGGAGCA tRNA-Ile-TAT-1-1 Sc: 62.9
Leu tRNAs
>>>>>>>..>>>..............<<<.>>>>>.........................................................................<<<<<..>>..............<<...>>>>>.......<<<<<.<<<<<<<. GGCAAGATGGCCGAGT.GGTctA..AGGCGTAGCATTAAGGaagatattctgagcattcaggaaaac........................................CTGCTAT.CTT............CGGG.CGTGGGTTCGAATCCCAC.TCTTGTCA tRNA-Leu-AAG-1-1 Sc: 65.4 GGCAAGATGGCCGAGT.GGTctA..AGGCGTAGCATTAAGGaagatattctgagcattcaggaaaac........................................CTGCTAT.CTT............CGGG.CGTGGGTTCGAATCCCAC.TCTTGTCA tRNA-Leu-AAG-1-2 Sc: 65.4 GGCAAGATGGCCGAGT.GGTctA..AGGCGTAGCATTAAGGaagatattctgagcattcaggaaaac........................................CTGCTAT.CTT............CGGG.CGTGGGTTCGAATCCCAC.TCTTGTCA tRNA-Leu-AAG-1-3 Sc: 65.4 >>>>>>>..>>>..............<<<.>>>>>.........................................................................<<<<<..>>..............<<...>>>>>.......<<<<<.<<<<<<<. GGCAAGATGGCCGAGT.GGTctA..AGGCGCTGTGTTCAGGattgtcatctta......................................................TCGCAGT.CTT............CGGG.CGTGGGTTCGAATCCCAC.TCTTGTCA tRNA-Leu-CAG-1-1 Sc: 65.9 GGCAAGATGGCCGAGT.GGTctA..AGGCGCTGTGTTCAGGaaatctcgattttca...................................................TCGCAGT.CTT............CGGG.CGTGGGTTCGAATCCCAC.TCTTGTCA tRNA-Leu-CAG-1-2 Sc: 65.8 >>>>>>>..>>>..............<<<.>>>>>.........................................................................<<<<<.......................>>>>>.......<<<<<.<<<<<<<. GGCTGGTTGGTGAAGT.GGTt.A..ACACACTGGTTTTAGGctatatgcgatcctgaccaatttgcaacgttgcaaatgtacatcttgttcgacccctcctatcataCACCAGGA..................TtCCTGGGTTCGATCCCCAG.ACTAGTCA tRNA-Leu-TAG-1-1 Sc: 52.3 >>>>>>>..>>>..............<<<.>>>>>.........................................................................<<<<<..>>>>..........<<<<...>>>>>.......<<<<<.<<<<<<<. GTGAGTGTGTTGAAATTGGT..Ag.CCAAGTCGACCTTAGG..................................................................AGTCGGT.AGTCTTA.......GACTG.TGTAGGTTCAAGTCCTAT.CACTCACA tRNA-Leu-TAG-2-1 Sc: 41.4 >>>>>>>..>>>>............<<<<..>>>>.........................................................................<<<<...>>>............<<<...>>>>>.......<<<<<.<<<<<<<. GGAAAGGTGCCCGAGT.CGTt.A..TGGGGTTGCACTTAAGatatataacaaatctcatc...............................................ATGCACT.GACTAAC.......CGTCGtCGCGGGTTCAAATCCCGC.CCTTTCCA tRNA-Leu-TAA-1-1 Sc: 39.0
Lys tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>...............................................<<<<<................>>>>>.......<<<<<<<<<<<<. TCCCGGCTAGCTCAGTCGGT.AGAGCGTCAGACTCTTActacaagggtttccgaggatttctcggagttt........ATCTGAAT...........GtCGTGGGTTCGAGCCCCACGTTGGGAG tRNA-Lys-CTT-1-2 Sc: 77.2 TCCCGGCTAGCTCAGTCGGT.AGAGCGTCAGACTCTTAttcacaagggtttccgagcatgttctcggagttt......ATCTGAAT...........GtCGTGGGTTCGAGCCCCACGTTGGGAG tRNA-Lys-CTT-1-1 Sc: 77.1 TCCCGGCTAGCTCAGTCGGT.AGAGCGTCAGACTCTTAttcaagggtttccgagtgtatgctcggatttac.......ATCTGAAT...........GtCGTGGGTTCGAGCCCCACGTTGGGAG tRNA-Lys-CTT-1-5 Sc: 77.1 TCCCGGCTAGCTCAGTCGGT.AGAGCGTCAGACTCTTAtgcaaacaagggtttccgaggttatctcggagttt.....ATCTGAAT...........GtCGTGGGTTCGAGCCCCACGTTGGGAG tRNA-Lys-CTT-1-3 Sc: 77.0 TCCCGGCTAGCTCAGTCGGT.AGAGCGTCAGACTCTTAcattatacaagggtttccgagcatgttctcggagttt...ATCTGAAT...........GtCGTGGGTTCGAGCCCCACGTTGGGAG tRNA-Lys-CTT-1-4 Sc: 77.0 >>>>>>>..>>>>.........<<<<.>>>>>...............................................<<<<<................>>>>>.......<<<<<<<<<<<<. TCCCGATTAGCTCAGTCGGT.AGAGCGTCAGACTTTTAcgtacaaaggtctccgagaatttccatactcggacttgtcATCTGAAT...........GtCAGGGGTTCGAGCCCCCTATTGGGAG tRNA-Lys-TTT-1-1 Sc: 72.9 GAAGGTATAACTCAGTTGGTtAGAGTGCGATACTTTTA........................................ATATCGAC...........GtCGTAGGTTCGAGTCCTACTATCTTTA tRNA-Lys-TTT-2-1 Sc: 64.7
Met tRNAs
>>>>>>>..>>>>.........<<<<.>>>>..................................................................<<<<................>>.>>>.......<<<<<.<<<<<<<. GTCTTCGTGGCCTAGTTGGTtAGGGCGTAGGTCTCATAcccaccaacgatcctgtattgacaggaatcaacctacggacagttacatgttcagacATCCTAAG...........AtCGC.GAGTTCGACTCTCGC.CGAGGACA tRNA-Met-CAT-1-1 Sc: 68.8 GTCTTTGTGGCCTAGTTGGTtAGGGCGTAGGTCTCATAccaacgatcctgcatcgcaggagtcaacctacaagcaagcgattgcttagaa.....ATCCTAAG...........AtCAC.GAGTTCGACTCTCGT.CAAGGACA tRNA-Met-CAT-3-1 Sc: 66.1 >>>>>>>..>>>>.........<<<<.>>>>>................................................................<<<<<................>>.>>>.......<<<<<.<<<<<<<. AGCTTCTTAGCGCAGTAGGT.AGCGCGTTGGGCTCATAcattgctatgaaaaacaacctttccaccgcaaggtggtgat................ACCCAAAG...........GtCGT.CGGATCGAAACCGAC.AGAAGCTA tRNA-Met-CAT-2-1 Sc: 63.8 >>.>>>>..>>>>.........<<<<.>>>>>................................................................<<<<<................>>.>>>.......<<<<<.<<<<.<<. AGCTTCTTAGCGCAGTAGGT.AGCGCGTTGGGCTCATAcaaaccctatgatatcctttccactttcgagtggcgat...................ACCCAAAG...........GtCGT.CGGATCGAAACCGAC.AGAATCTA tRNA-Met-CAT-4-1 Sc: 54.4 >>>>>.>..>>.>.........<.<<.>>>>>................................................................<<<<<................>>.>>>.......<<<<<.<.<<<<<. GCTGGAATAGGCTAACTGGTtAAACCATACCATTCATA.........................................................CTGGTAA............AtCGAtGGGTTCGAGTCCCTC.TCCCAGCT tRNA-Met-CAT-5-1 Sc: 34.0
Phe tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>...................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GCTTCTTTAGCTCAGTTGGTAcGAGCGTTCGACTGAAGatttcagttcttcgcatttgggacccccgtcctatccgcta...TTCGAAAG...........GtCACCTGTTCGACCCAGGTAAGGAGCA tRNA-Phe-GAA-1-2 Sc: 61.8 GCTTCTTTAGCTCAGTTGGTAcGAGCGTTCGACTGAAGatttcagttcttcgcagctaggatcccgtcctatccgcta....TTCGAAAG...........GtCACCTGTTCGACCCAGGTAAGGAGCA tRNA-Phe-GAA-1-3 Sc: 61.8 GCTTCTTTAGCTCAGTTGGTAcGAGCGTTCGACTGAAGatttcagttctttgcagcaagaaccgttaggaactcagccgccaTTCGAAAG...........GtCACCTGTTCGACCCAGGTAAGGAGCA tRNA-Phe-GAA-1-1 Sc: 61.6 GCCTCAATAGCTTAGATGGTA.GAGCATAGAACTGAAG............................................CTTCTAAC...........G.GATTGGTTCGATTCCAGTTTGAGGCA tRNA-Phe-GAA-2-1 Sc: 58.2
Pro tRNAs
>>>>>>>...>>>............<<<.>>>>>............................................................<<<<<................>>>>>.......<<<<<.<<<<<<<. GGGCCAA.TCGTATAGTGGCttA.TTATGCTGTCTTAGGGcttcctctcctttcaggagattgcactaagt......................TGACAGAG...........GtCCCCGGTTCGATTCCGGG.TTGGCCCC tRNA-Pro-AGG-1-1 Sc: 40.1 GGGCCAA.TCGTATAGTGGCttA.TTATGCTGTCTTAGGGctttcacctccttccagaggttgcactaagt......................TGACAGAG...........GtCCCCGGTTCGATTCCGGG.TTGGCCCC tRNA-Pro-AGG-1-2 Sc: 40.1 GGGCCAA.TCGTATAGTGGCttA.TTATGCTGTCTTAGGGctttcccctccatccagaggttgcactaagt......................TGACAGAG...........GtCCCCGGTTCGATTCCGGG.TTGGCCCC tRNA-Pro-AGG-1-3 Sc: 40.1 >>>>>>>...>>>>..........<<<<.>>>>>............................................................<<<<<................>>>>>.......<<<<<.<<<<<<<. GGTTGCT.TCGTCCAGTGGT..A.GGATACCTCTTTCGGGcaaaacataacccggtatgttacataccagatcgaggctctaggttcgaattcTAGAGGTG...........GtCGCGGGTTCGAATCCCGC.AGTGACCC tRNA-Pro-CGG-1-1 Sc: 53.2 >>>>>>>...>>>............<<<.>>>>>............................................................<<<<<................>>>>>.......<<<<<.<<<<<<<. GGCCGCT.TGGCGTAGTGGT..A.TCGCGCTTGCTTTGGGtctttgtaagcgaaata....................................TGCAAGAG...........GtCACGAGTTCGATCCTCGT.AGCGGCCC tRNA-Pro-TGG-1-1 Sc: 69.1 >>>>>>>...>>>>..........<<<<.>>>>>............................................................<<<<<................>>>>>.......<<<<<.<<<<<<<. CAGATTGaTGGCCTAATGGTtcA.GGGCGATCACTTTGGG.....................................................AGTGATA............GtACTGAGTTCAAGTCTCAG.CAGTCTGA tRNA-Pro-TGG-2-1 Sc: 40.0
SeC tRNAs
Ser tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>....................................................................<<<<<..>>>>.............<<<<..>>>>>.......<<<<<.<<<<<<<. GGCGCTTTGGCGGAGTGGTt.A.TCGCGTGGCACTAGAAtttccggattctagagtatcttcctactcaacaacaat.......................ATGCCAT.TCCC...TCT.......GGGAGCATAGGTTCAAATCCTGT.AGGCGTCG tRNA-Ser-AGA-1-1 Sc: 60.1 GGCGCTTTGGCGGAGTGGTt.A.TCGCGTGGCACTAGAAtttacggattctagagtatcttcctactcaacaacaat.......................ATGCCAT.TCCC...TCT.......GGGAGCATAGGTTCAAATCCTGT.AGGCGTCG tRNA-Ser-AGA-1-2 Sc: 60.1 >>>>>>>..>>>>..........<<<<.>>>>>....................................................................<<<<<..>>>>.............<<<<..>>>>>.......<<<<<.<<<<<<<. GGCACTATGGCGGAGTGGTt.A.TCGCGTAGCACTCGAActcttcatcttgcagatcgagccaacacttcaat...........................ATGCTAT.TCCC...CCT.......GGGAGCGCAGGTTCAAATCCTGC.TGGTGTCG tRNA-Ser-CGA-1-1 Sc: 62.5 GGCACTATGGCGGAGTGGTt.A.TCGCGTAGCACTCGAActcttcacttgcagatcgagcaacactcaaacaat..........................ATGCTAT.TCCC...CCT.......GGGAGCGCAGGTTCAAATCCTGC.TGGTGTCG tRNA-Ser-CGA-1-2 Sc: 62.4 >>>>>>>..>>>............<<<.>>>>>....................................................................<<<<<..>>>>.............<<<<..>>>>>.......<<<<<.<<<<<<<. GGTGCGATGCCCGAGTGGTt.A.AGGGGTTAGTCTTGAAttacaattcaacggtcgtgcgatgagctgatt.............................AACTAAT.TCGC...AAT.......GCGAGCGCAGGTTCGAACCCTGC.TCGCACCG tRNA-Ser-TGA-1-1 Sc: 69.4 >>>>>>>..>>>............<<<.>>>>>....................................................................<<<<<..>>>>>...........<<<<<..>>>>>.......<<<<<.<<<<<<<. GGACGTGTGACAGAGTGGTttA.ATGTACCTGGCTTGAG.............................................................TCTAGGAGTTCTCAC.......CCGAGAACCGGGAGTTCGAATCTCCC.CGCGTCCG tRNA-Ser-TGA-2-1 Sc: 50.8 >>>>>>>..>>>............<<<.>>>>>....................................................................<<<<<..>>>>.............<<<<..>>>>>.......<<<<<.<<<<<<<. GACGCTTTGGTGGAGTGGTt.A.ACACGTATCCCTGCTAttaagcatttcgtttatcgaaggga....................................AGGATAT.CCTC...TCT.......GAGGGCGTGAGTTCGAATCTCAC.AGGCGTCG tRNA-Ser-GCT-1-1 Sc: 66.4 GACGCTTTGGTGGAGTGGTt.A.ACACGTATCCCTGCTActtttctttcccttcattcgggcaagtctgtacagtcagcatttggtctctgccaaagaatAGGATAT.CCTC...TCT.......GAGGGCGTGAGTTCGAATCTCAC.AGGCGTCG tRNA-Ser-GCT-1-2 Sc: 65.0
Sup tRNAs
Thr tRNAs
>>>>>>>..>>>>........<<<<.>>>>>............................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GCCTCCTTAGCTCAGCGGTA.GAGCACTTCACTAGTA.....................................................ATGAAGAG...........GtCAGTCGTTCGAGTCGGCTAGGAGGCA tRNA-Thr-AGT-1-1 Sc: 75.4 GCCTCCTTAGCTCAGCGGTA.GAGCACTTCACTAGTA.....................................................ATGAAGAG...........GtCAGTCGTTCGAGTCGGCTAGGAGGCA tRNA-Thr-AGT-1-2 Sc: 75.4 GCCTCCTTAGCTCAGCGGTA.GAGCACTTCACTAGTA.....................................................ATGAAGAG...........GtCAGTCGTTCGAGTCGGCTAGGAGGCA tRNA-Thr-AGT-1-3 Sc: 75.4 >>>>>>>..>>>>........<<<<.>>>>>............................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GCTTCCTTAGCTCAGTGGGA.GAGCGCGCCACTCGTAtagcgcgac............................................ATGGTGAG...........GtCACTAGTTCAATCCTGGTAGGAAGCA tRNA-Thr-CGT-1-1 Sc: 64.5 >>>>>>>..>>>>........<<<<.>>>>>............................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GTCGACTTAGTTTAGTGGTA.GAATAGGTAACTTGTA.....................................................ATTACTTG...........A.CACTAGTTCGATTCTAGTAGTCGGCA tRNA-Thr-TGT-2-1 Sc: 61.1 >>>>>>>..>>>..........<<<.>>>>>............................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GCTCGCTTGGCTAAGTGGTA.CAGCGCGCCACTTGTAcataaggcacttcagcagagtccgcacttgcggaagtgtcctgacttacaggcATGGCGAG...........AtCACTCGTTCGAACCGGGTAGTGAGCA tRNA-Thr-TGT-1-1 Sc: 57.2
Trp tRNAs
>>>>>>>..>>>>........<<<<.>>>>......................................................<<<<................>>>>>.......<<<<<<<<<<<<. GGCCCTATAGCTCAGTGGTA.GAGCGTCGGCTTCCAGctataaaattggcgaaaatgttagatttggacccaatcttgagcgTTCCGAAG...........GtCTTCCGTTCGATCCGGGATGGGGTCA tRNA-Trp-CCA-2-1 Sc: 52.8 GGCCCTTTAGCTCAGCGGTA.GAGCGTCGGCTTCCAGtacaaatcctcccccgtggacgcgcagctggtatc..........TTCCGAAG...........GtCATCCGTTCAAATCGGGTAGGGGTCA tRNA-Trp-CCA-1-1 Sc: 52.1
Tyr tRNAs
>>>>>>>..>>>>.........<.<<<.>>>>>.......................................<<<<<.......................>>>>>.......<<<<<.<<<<<<<. CCGGACATAGCTCAGTTGGA.AGtAGCGATGGTTTGTAAttggaaaccctaatccggtattaacggaaaagCACCATAG..................GtCGCCGGTTCGATTCCGGC.TGTCCGGA tRNA-Tyr-GTA-1-1 Sc: 59.2 CCGGACATAGCTCAGTTGGA.AGtAGCGATGGTTTGTAAttggaaaccctaatccggtattaacggaaaagCACCATAG..................GtCGCCGGTTCGATTCCGGC.TGTCCGGA tRNA-Tyr-GTA-1-2 Sc: 59.2 CCGGACATAGCTCAGTTGGA.AGtAGCGATGGTTTGTAAttggaaaccctaatccggtattaacggaaaagCACCATAG..................GtCGCCGGTTCGATTCCGGC.TGTCCGGA tRNA-Tyr-GTA-1-3 Sc: 59.2 >>>>>>>..>>>>.........<.<<<.>>>>>.......................................<<<<<..>>>............<<<...>>>>>.......<<<<<.<<<<<<<. TGCAGATATGCTCTATTGGTtGG.GGCGGTGCTCTGTAA................................AAGCATT.GGCTGTA.......TGCCGtGGTGAGTTCGAATCTCAC.ATCTGCAA tRNA-Tyr-GTA-2-1 Sc: 30.6
Val tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.....................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGTTTCTTGGCGCAGTTGGTtA.GCGCGTCTCCTTAACAattctgatccatcagatcgttagggctta.CGGAGGAG...........GtCGCCGGTTCGAACCCGGCAGAAATCA tRNA-Val-AAC-1-1 Sc: 69.5 GGTTTCTTGGCGCAGTTGGTtA.GCGCGTCTCCTTAACAattctgatcattcagatcgttagggctta.CGGAGGAG...........GtCGCCGGTTCGAACCCGGCAGAAATCA tRNA-Val-AAC-1-2 Sc: 69.5 GGTTTCTTGGCGCAGTTGGTtA.GCGCGTCTCCTTAACAattctggtcagttcagatcgttagggcttaCGGAGGAG...........GtCGCCGGTTCGAACCCGGCAGAAATCA tRNA-Val-AAC-1-3 Sc: 69.4 GGTTTCTTGGCGCAGTTGGTtA.GCGCGTCTCCTTAACAattctggtcagttcagatcgttagggcttaCGGAGGAG...........GtCGCCGGTTCGAACCCGGCAGAAATCA tRNA-Val-AAC-1-4 Sc: 69.4 >>>>>>>..>>>>..........<<<<.>>>>>.....................................<<<<<................>>>>>.......<<<<<<<<<<<<. GCTCCAATCGATTAAC.GGTtA.AATCACGCCCTTCACA..............................CGGGCGAG...........C.CCTCGGTTCGATTCCGAGTTGGAGCA tRNA-Val-CAC-1-1 Sc: 55.1 >>>>>>>..>>>>..........<<<<.>>>>>.....................................<<<<<................>>>>>.......<<<<<<<<<<<<. GCTGCTTTAGCTCAGT.GGTtA.GAGTAGTACCTTTACAacctcttctttgtaaaatta..........CGGTATTG...........GtCACAGGTTCGATCCCTGTAAGCAGCA tRNA-Val-TAC-1-1 Sc: 67.6 AAGGGTTTAGCTGAGT.GGT.T.TAGCATCGATCTTACA..............................CATCGAGG...........A.CAGAGGTTCGATTCCTCTAATTCTTA tRNA-Val-TAC-2-1 Sc: 46.7