Structurally Aligned tRNAs (by Isotype & Anticodon)

Structural alignments are generated by aligning tRNA sequences against domain-specific tRNA covariance models with the use of COVE.

Ala tRNAs
>>>>..>>>....>>>................<<<.........>>............................................................................................<<....................>>>.>>.......<<<<..<.....<<<<<<<. CCCT..TGAT.AGCTC.......AGCTGGAA.GAGG.....TA.CGTTTCTAGctcctcgacagacatctttagattgtcttgctgacttaaacgggcagcgcgagactgtaatggacacaatcagagcat.....CTCG..AG.............GcCCGC.GGTTCGATCCCGC..G.....TCGAGGGA tRNA-Ala-AGC-2-1 Sc: 32.7 >>>...>>.....>>..................<<.......>>>>>..........................................................................................<<<<<..................>>>.>>.......<<<<..<......<<.<<<. ACTA..ACATcACTCC.......AGT.GGTA.TGAT.....TCTTCCTTAGCAgcctttggcaacgccaatgcagtcg..........................................................TGGAAGAG.............GtCCTG.GGTTCAATTCCCAgcG.....CGTAAGTC tRNA-Ala-AGC-1-1 Sc: 24.4 >>>>..>>>...>>>..................<<<......>>>>>..........................................................................................<<<<<..>...........<...>>>.>>.......<<<<..<.....<<<<<<<. GGGC..ATCT.GGTCC.......AAT.GGTA.AGATccgta.TGAGGTTGGCGccaatgagcgcacaaatgagtgccaatgtgcagc.................................................CCCTCATACG.........GGA.TGCGtGGTTCGAATCCCG..C.....GATGCCTA tRNA-Ala-GGC-1-1 Sc: 31.1 >.>>..>>>...>>>>................<<<<......>>>>>..........................................................................................<<<<<..................>>>.>>.......<<<<..<.....<<<<<.<. GTACagTTGT.GGCGC.......AGT.GGTA.GCGC.....ATCTGCTTCGCAggagtatgccggagagcgtgaccgtgagacatgatgtccggaaggccaatgagccaaggcgcgactcgtagatggaactcgaaTGCAGGTG.............GtCGTC.AGTTCAATCCTGA..C.....CAAGTCCA tRNA-Ala-CGC-1-1 Sc: 49.5 >>>>..>>>...>>>>................<<<<......>>>>>..........................................................................................<<<<<..................>>>.>>.......<<<<..<.....<<<<<<<. GGGG..ATAT.AGTTT.......AATTGGTA.AAAC.....TGCGATTTTGCA...................................................................................TATCGTT..............AtTTTA.GGATCGAGTCCTA..A.....TATCTCCA tRNA-Ala-TGC-1-1 Sc: 42.3 >.>>..>.>....>.>................<.<.......>>>>>..........................................................................................<<<<<..................>>>.>>.......<<<<..<.....<.<<<.<. GCCT..TTCT.AACACcaacatcAGGTGGTA.GCGC.....GTCCGCTTTGCAtcttggatcatcaagaacgctgg............................................................TGCGGAAG.............GtCTAG.GGTTCGATCCCCT..Agtt..GTAAGTCA tRNA-Ala-TGC-2-1 Sc: 22.6
Arg tRNAs
>>>>.........>>>..............>>>>..........<<<<.>>>>..>....................................................................<..<<<<...................>>>>>................<<<<..<....<<<<<..<<. AGCG.........TGT...........TA.ACTCAAT.GGTtA.GAGTATTGT..G..CTACGG..........................................................A.C..ACAATG..............GtTGCAAGTTCG........AAT.CTTG..T....ACACG..TTT tRNA-Arg-ACG-1-1 Sc: 56.5 >>>..........>>...............>>>>..........<<<<.>>>>..>....................................................................<..<<<<...................>>>>>................<<<<..<.....<<.<..<<. GGTC.........GGC...........TG.GCTCAAT.GGT.A.GAGTGCTTG..A..CTACGAtttcatgcgtt...............................................A.T..CAAGAG..............GtTGCAGGTTCGgtaagcgg.TT.CCTGaaT....ATCAAgtTCA tRNA-Arg-ACG-3-1 Sc: 29.5 >.............................>>>>..........<<<<.>>>>..>....................................................................<..<<<<....................>>.>................<.<<...............<. G.............................GCTCAAT.GGT.A.GAGTGCTTG..A..CTACGActtcccgtcgat..............................................A.T..CAAGAG..............GtTGCAGGTTCG........AG..CGTG..A....GTTGC..CCA tRNA-Arg-ACG-2-1 Sc: 20.1 >>>>.........>>>..............>>>>..........<<<<.>>>>..>....................................................................<..<<<<...................>>>>>................<<<<..<....<<<<<..<<. GGTC.........CCA...........TA.GTTCAATTGGT.A.GAATGTTGG..A..GTCCGG..........................................................A.T..CCAGAG..............GtTGTCAGTTCG........AGT.CTGG..C....TGGGA..TCA tRNA-Arg-CCG-1-1 Sc: 65.0 GATAtctgcacagCCG...........TG.GCCTAAT.GGT.A.AGGCGTTGC..T..TTCCGGtgtgggaag.................................................T.G..GCAAAG..............AtTGTGGGTTCG........AGT.CCCA..T....CGGTG..TCG tRNA-Arg-CCG-2-1 Sc: 38.8 >>>>.........>................>>>>..........<<<<.>>>>..>....................................................................<..<<<<...................>>>>>................<<<<..<......<<<..<<. TGCT.........AATcaaccacaggtTG.GCGCAAT.GGT.A.GCGCGTTGG..T..TTTCGGttcagaata.................................................C.A..CCAAAG..............GtTGAGGGTTCG........AGC.CCCT..Tg....CTGG..TAT tRNA-Arg-TCG-1-1 Sc: 40.0 >>>>.........>>>..............>>>>..........<<<<.>>>>..>....................................................................<..<<<<...................>>>>>................<<<<..<....<<<<<..<<. GGAG.........AAG...........TG.GTCTAGT.GGT.A.GGGCCCAGGc.A..CTTCGAatcgttagaggtgggcgattctcttgtccatgcatcgttcatttgagtaaaatgc...A.TgtCCTGG...............A.TGTCAGTTCG........AGT.CTGA..C....CTTCT..CCA tRNA-Arg-TCG-2-1 Sc: 39.7 >>>>.........>>>..............>>>>..........<<<<.>>.>..>....................................................................<..<.<<...................>>>>>................<<<<..<....<<<<<..<<. GGAG.........AAG...........TG.GTCTAGT.GGT.A.GGGCACAGG..CacCTCGAAtcgctagaggtgggcaattcattagtccatgcttcgttcctttcaataat........AgG..CATGT.CCTG..........GtCGCACGTTCG........AAT.CGTG..C....CTTCT..CCA tRNA-Arg-TCG-3-1 Sc: 38.4 >>>>.........>>>..............>>>>..........<<<<.>>>>..>....................................................................<..<<<<...................>>>>>................<<<<..<....<<<<<..<<. GGAG.........ATG...........TG.GTCTAGT.GGT.C.GGGCACAGGc.A..CCTCGAttcattagaggtgggcgattcattggtccatgcctcattcgttgttaataggc.....A.TgtCCTGG...............A.CGTAGGTTCG........AGT.CCTA..C....TGTCT..CCA tRNA-Arg-TCG-5-1 Sc: 33.0 >>>>.........>>>..............>>>>..........<<<<.>>>>..........................................................................<<<<...................>>>>>................<<<<..<....<<<<<..<<. GGGG.........AAG...........TG.GTCCAGC.GGT.A.GGGCACAGG..Cg.CCTCGActcactagaggtgggcaattcattagcccatgcttcattccttgttaataggcatg..T....CCTGG...............A.TGTACGTTCG........AAT.CGTA..C....CTTCT..CCA tRNA-Arg-TCG-4-1 Sc: 29.9 >>>>.........>>>..............>>>>..........<<<<.>>>>..>....................................................................<..<<<<...................>>>>>................<<<<..<....<<<<<..<<. TACC.........TGC...........TT.GCTTAAT.GGT.A.GAGCGTAAT..A..CTCCTA..........................................................A.T..ATTATA..............G.TCTAAGTTCA........AAT.CTTA..G....GTGGG..TAA tRNA-Arg-CCT-1-1 Sc: 48.9 >>>>.........>>>..............>>>>..........<<<<.>>>>..>....................................................................<..<<<<...................>>>>>................<<<<..<....<<<<<..<<. GGTT.........TCT...........TG.GCTCAATCGGT.A.GAGCGGATG..G..CCTCTGgtcccagagtcgtgactatcctcaaggatggaagcgactcagggg.............T.C..CATCAG..............A.CCTGAGTTCA........ATT.CTCA..G....AGAGA..CCA tRNA-Arg-TCT-2-1 Sc: 58.1 AGCC.........CAG...........TAaGTTTAGT.GGT.A.GAACGTGGA..G..CTTCTAtacttcggtt................................................A.C..TCCAAG..............G.CCAGAGTTCG........ATT.CTCT..G....CTGGG..CTC tRNA-Arg-TCT-3-1 Sc: 56.7 TTCT.........TAC...........TA.GCTTAAT.GGT.A.GAGCAGGAT..A..CTTCTA..........................................................A.T..ATCTAG..............A.TCTAAGTTCA........AGT.CTTA..G....GTGAG..AAT tRNA-Arg-TCT-1-1 Sc: 54.8 GGAG.........ATC...........TG.GTCTAGT.GGT.A.GGGCACAGGcaC..CTCTGAatcgttaagaggtgggcgattcattagcccatgcttcattcgctttgattaataggcaT.Gt.CCTGG...............A.TGTCAGTTCG........AGT.CTGA..C....GGTTT..CCA tRNA-Arg-TCT-4-1 Sc: 31.1
Asn tRNAs
>>..>>>>>..>>>>..........<<<<.>>>>>.......................................................................................<<<<<...................>>.>>>.......<<<<<<<<<<<<. GG..TCTCTTAGCTCAAT.GGCtA.GAGCGGATGAC.CATTGtcacctcatgcctctccttggtggacccaagggggggctaaggtg..................................CTCATCAG..............A.TCT.GAGTTCGATTCTCAGAGAGACCA tRNA-Asn-ATT-1-1 Sc: 54.8 GC..TGATCTGGTCTAAT.GGT.A.AGATTCTGTGC.TATTA...............................................................................CTGCAGAG..............A.TGCgTGGTTCGAGTCCGGCGATCAGCA tRNA-Asn-ATT-2-1 Sc: 53.0 >>..>>>>>..>>>>..........<<<<.>>>>>.......................................................................................<<<<<...................>>.>>>.......<<<<<<<<<<<<. GC..CTTTATAGCTCAAC.GGT.A.GAGCGGAATAC.TGTTA...............................................................................ATATTCTG..............A.TAT.ATGTTCGATTCATATTAAGGGCT tRNA-Asn-GTT-3-1 Sc: 57.7 >>...>>>>..>>>>..........<<<<.>>>>>.......................................................................................<<<<<...................>>.>>>.......<<<<<<<<<.<<. TAtcCCCCATGGCGCAATTGGCtA.GCGCGTTCGAC.TGTTAccattgtatggaagcaggt............................................................ATCGGGAG..............GtTGA.TAGTTCGAGCCTATCTGGGTTAG tRNA-Asn-GTT-1-1 Sc: 44.3 >>..>>>>>..>>>>..........<<<<.>.>>>.......................................................................................<<<.<...................>>.>>>.......<<<<<<<<<<<<. GG..GGCTTTAGTTCAATTGGT.A.GAACAGTTGGTgTGTTGcatgcagcacgggccaaaaattgacaggttgcgcgagggcggttgtatcgaccgtgcgtgagtcctcgtaaacaacacaTCCATCAG..............A.TCC.GGGTTCGATTCTCGGAAGCTCCA tRNA-Asn-GTT-4-1 Sc: 35.4 >>..>>>>>..>>>>..........<<<<.>>.>.........................................................................................<.<<...................>...>>.......<<..<<<<<<<<. TC..CTTCGTGGCGCAATTGGCtA.GCGCGTTCGAC.TGTTActcgttacgagaaatggcatcgggaggttgataggtacgctccatcaccgcatggatcctgcaacgaccat........AGCTAACGTTA...........A.AGC..AGTTCGATCCTATCCGAAGGAG tRNA-Asn-GTT-2-1 Sc: 24.5
Asp tRNAs
>>>>>>>..>>>..........<<..<.>>>>............................................................<<<<..................>>.>>>.......<<<<<.<<<<<<<. GCTGACCTGGTCCAATGGTA.AGA..CACAGGCATATCAatacattcaatctatgga.................................CACCTGGG..............ATGCgTGGTTCGAGTCCGGC.GGTCGGCA tRNA-Asp-ATC-1-1 Sc: 34.3 >>>>>>>..>>>..........<<..<.>>>>>..........................................................<<<<<..................>>.>>>.......<<<<<.<<<<<<<. GGGGATGTGGTCCAATGGTA.AGAtcCTCACGGTTGTCTctcccttatgggtattgcactagacttggtatctctgataccttgtgtgccTCCGTGA.TGGG..........ATAC.CAGTTCGAGTCTGGT.CGTCTCCA tRNA-Asp-GTC-1-1 Sc: 27.0
Cys tRNAs
>.>>.>>..>>>>........<<<<.>>>>>..................<<<<<................>>>>>.......<<..<<<<<.<<.<. TCAGCTTTAGCTCAGTGGTA.GAGCGTGGGATTGCAGtaaaagcaatcATCCTAAG...........GtCACTCGTTCGAACCGttAGTAATCTAAA tRNA-Cys-GCA-1-1 Sc: 31.5
Gln tRNAs
>>>>>>>..>>>..........<<<.>>>>...........................<<<<...............>>.>>>.......<<<<<<<<<<<<. GCTGATCTGGTCCAATGGTA.AGATACAGGTCATTGAgatacagaatatgtagtcTTCCTGGG...........ATGCgTGGTTCGAATCCGGCGGTCAGCA tRNA-Gln-TTG-1-1 Sc: 36.1
Glu tRNAs
>>>>>>>..>>..>>.....................................<<<<.>.>.>..>................................................................................................................................................<.<.<<...................>>>>>.......<<<<<.<<<<<.<<. GGGAGAATGGT..CC...........A...........GTGGT.A.......GGGCAC.AGG..CGCCTCGattcattagaggtgggcaattcattagcccatgcttaattcattgattaaca.....................................................................................AG.CATGT.TCTG..........GaTGTCAGTTCGAGTCTGAC.TTCTC.CCA tRNA-Glu-CTC-5-1 Sc: 38.2 >>>>>>>..>>..>.......................................<<<.>..>>..>................................................................................................................................................<.<<.<...................>>>>>.......<<<<<.<<<<<.<<. GGGCGCTTGGT..CT...........A...........GGGGT.A.......TGATTGtAAG..GGTCTCCgcaagctgttctcgttgtcccagtgcctaacagaacctccagttcgcttcgcatgttgggatcctcttccacacagccatgtgaaaggtacagatacacttccctgcataggataaagacctcagagattaacagagAC.CT.CAG..............GtCGTGGGTTCAATTCCCAC.AGCGT.CCA tRNA-Glu-CTC-4-1 Sc: 35.9 >>>.>>>..>>..>>.....................................<<<<.>.>>>..>................................................................................................................................................<.<<<<...................>>>>>.......<<<<<.<<<.<.<<. TCCATTATAGT..CGctaacgatccaA...........GTGGCtA.......TGATTC.GTC..GCTCTCAcattaaagaa...............................................................................................................................CC.GACGCG..............A.CCGGGGTTCGATTCCCCG.TAACG.GAA tRNA-Glu-CTC-2-1 Sc: 35.6 >>>>>>>..>.............................................<...>.>..>................................................................................................................................................<.<.<....................>>>>>.......<<<<<.<<<<<.<<. TCCGTTATGGT..CTa........................GGT.A....aatTACCAA.GAC..GCATCCAcatcttgcctaggacagcagctaatccccaaaagtggctaggatttgtcgctctcatctctacgagacaggc.................................................................CC.GACAAG..............G.CCGGGGTTCAATTCCCCG.TGACG.GAA tRNA-Glu-CTC-1-1 Sc: 33.9 >>>..>>..>>..>>.....................................<<<<.>.>>>..>................................................................................................................................................<.<<<<...................>>>>>.......<<<<<.<<..<.<<. TCCAATACAGTtaCT...........AaccttccaaaaGTGGCtA.......GGATTT.GTG..ACTCTCAtcaggctctcctgcaaagtg.....................................................................................................................CT.CACAAG..............G.CCGGGGTTCAATTCCCCG.TGACG.GAA tRNA-Glu-CTC-3-1 Sc: 22.4 >>>>>>>..>>..>.......................................<<<.>.>>>..>................................................................................................................................................<.<<<<...................>>>>>.......<<<<<.<<<<<.<<. GACCCACTAGT..CA...........A...........GAGGTtA.......AGACGT.AAT..GCTTTCA.........................................................................................................................................CC.ATTAG...............AtCTTGGGTTCAATTCCCAA.GTGGG.TTA tRNA-Glu-TTC-2-1 Sc: 46.7 >...>>>..>>..>>.....................................<<<<.>.>>>..>................................................................................................................................................<.<<<<....................>>>>.......<<<<..<<<....<. G...CTTAGGT..CC...........A...........GTGGTtA.......GGATCT.TTC..GCTTTCAtcctttgaggcg.............................................................................................................................CC.GAAATG..............G.CCCGGGTTCGAACCCCGT.AAGT...CG tRNA-Glu-TTC-1-1 Sc: 32.2 >>>>>>>..>>..>.......................................<<<.>.>>>..>................................................................................................................................................<.<<<<...................>>>>>.......<<<<<.<<<<<.<<. GCAGTTGTGGT..CA...........A...........ATGGTtA.......AGGCGC.ATCatTCTTTCG.........................................................................................................................................AAcGATGAG..............A.ATACGGTTCGATTCCGTA.CAACTtGCT tRNA-Glu-TTC-3-1 Sc: 25.5
Gly tRNAs
>>>..>.>>..>>>>..............<<<<.>>.>>>..................................................................................<<<<<................>>>.>>.......<<<<<<<.<<<<. GGT..CCTGTGGTGT.AATGGCcaA....GCACATCtAGACTACCAttgtcttcgcatcggtttggcattgagacctgcgctcttacttgccatctttgcgattatccttgcgacaaagcaGTCTGAAG...........G.ACTA.CGTTCGAATCGTAGCGAGACCA tRNA-Gly-ACC-1-1 Sc: 29.9 >>>..>>>>..>>>>..............<<<<.>>.>>>..................................................................................<<<<<................>>>.>>.......<<<<<<<<<<<<. GCT..ACCATGGTTG.AATGGT..A....CAATTCG.CGCTTGCCAaaagcatct..................................................................TGTGCGAG...........G.TCCG.CGTTCGATTCGCGGTGGTAGCA tRNA-Gly-GCC-1-1 Sc: 49.3 >>>..>>>>..>....................<.>>...>..................................................................................<..<<................>>>.>>.......<<<<<<<<<<<<. GCA..TCAGTGGTTTa...GGT..A.......CATC.TCCTTTGAAcaccttcattcctgttcagtttctaacggtcgaacagtggtaaaatccatcgttgccatcacactcag.......CGTCGATGG..........GcCCCG.TGTTCGATTCACGGCTGATGCA tRNA-Gly-GCC-2-1 Sc: 26.2 >>>..>>>>..>>>>..............<<<<.>>.>>>..................................................................................<<<<<................>>>.>>.......<<<<<<<<<<<<. AGA..GGCGTGGTCTcAAGGGT..A....AGATACG.TCGAGTTGActggccaagccaatgcc..........................................................TCGACGGG...........A.TGCGtGGTTCGATTCCCGCCGTCTCTA tRNA-Gly-GCC-3-1 Sc: 20.5 >>>..>>>>..>>>>..............<<<<.>>..>>..................................................................................<<.<<................>>>.>>.......<<<<<<<<<<<<. GCCctACGCTAGTAC.AGTGGTt.A....GTATCTC.TCCTTCCCAtcgcagtgcatggctgcacatcaagtgcgggaac.........................................AGGTGAGG...........A.CACG.AGTTCGAATCTCGTGCGTGGCA tRNA-Gly-CCC-1-1 Sc: 42.7 >>>..>>>>..>>>>..............<<<<.>>.>>>..................................................................................<<<<<................>>>.>>.......<<<<<<<<<<<<. GTC..GTGTTAGTGT.AGTGGTtcA....ACACATC.AGACCTCCAaagtccagcatggtcaggagagtggcggaagttgttcgagtgatttgtgttgtaggctaccaaggt.........ATCTGAAG...........G.CAGG.AGTTCGAATCTCCTACACGACA tRNA-Gly-TCC-1-1 Sc: 63.5 >>>..>>>>..>>>>..............<<<<..>.>>>..................................................................................<<<<.................>>>.>>.......<<<<<<<<<<<<. ACG..GCTATAGGTT.AATGGT..A....GACCGTT.CGTCTTCCA...........................................................................AACGATGT...........G.TATC.GATTCGAATTCGGTTGGCCGTA tRNA-Gly-TCC-2-1 Sc: 34.2
His tRNAs
>>>>>>>..>>>>.........<<<<.>>>.>>...............................................<<<<<................>>>>>.......<<<<<<<<<<<<. GCCGCCTTAGTGCAGTGGTtA.GCACGTTT.CATTGTGGtatacaaa................................CTGAAGAA...........G.CCCCTGTTCGAACCAGGGAGGCGGCA tRNA-His-GTG-1-1 Sc: 62.3 >>>>>.>..>>>...........<<<..>>..>...............................................<.<<.................>>>>>.......<<<<<<.<<<<<. GGGGATGTGGTCCAATGGT.A.AGATCTCTaTACCTGCGctgtgattgcagttgccgagagttaagacgcatactcaggAT.AGTAG...........GaTTCCAGTTCGAGTCTGGGCTTCTCCG tRNA-His-GTG-2-1 Sc: 22.5
Ile tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>..........................<<<<<...............>>>>>.......<<<<<<<<<<<<. GGACTTTTAGTTTAGTGGTtA.GAACATCCGTCTGATAttcctcatcatatcaggtaCGCGGGAA...........AACGAGGTTCGATTCCTCGAAGGTCTA tRNA-Ile-GAT-1-1 Sc: 45.2
Leu tRNAs
>>>>>>>..>>>............<<<.>>>>>.........................................................................................................................<<<<<..>>...........<<...>>>>>.......<<<<<.<<<<<<<. GGAGAGATGGCCGAGCGGTctA.AGGCGCTGTC.TTAAGGtaatacagtcttctctgtatcatcaa.....................................................................................C..GGCAGT.CTGA.......AAAGG.CGTGGGTTCGAATCCCAC.TCTCTTCA tRNA-Leu-AAG-1-1 Sc: 56.4 >>>>>>>..>>>>..........<<<<.>>>>>.........................................................................................................................<<<<<....................>>>>>.......<<<<<.<<<<<<<. GGAGAAGTAGTTCAATGGTt.A.GAATCCTCGCa..GTCAgcacctgataagtgcagatatcctgcaatcctgaggcctgatcaacctcggattgcaaccaacaagtgcagatccaagtgcagattgtgggagctccgcctagcagactctT..GCGAGGG...............A.TGTTGGTTCGAATCCGAC.CTTCTTCG tRNA-Leu-CAG-1-1 Sc: 35.3 >>>>>>>..>.>>..........<<.<.>>.>...........................................................................................................................<.<<....................>>>>>.......<<<<<.<<<<<<<. GCTGCCCTGGTGTAGTGTA..A.GCTTATTCGC.ATCACAatctgtgtcaaatgtggttctaacgattctcttagtggttatcgtaagcattatccttatctgatcatcaacgaacgtattctaacaaaattccagacgtcagtctaaca.C..ACTGAAG...............GtCCTGAGTTCAAGTCTCAG.GGGCAGTA tRNA-Leu-CAA-1-1 Sc: 21.7
Lys tRNAs
>>>>>>>..>>>>...........<<<<.>>.>>..............................................................................................................................................................<<.<.<.......................>>>>>...........<<<<<..<<<<<<<. GCCGGGGTAGCTCAATCGGT..A.GAGCGTGTGG...CTCTTAgcattccaatgcgaa.....................................................................................................................................ACCTC.AAG..................GtCGTGGGT....TCGAGCCCCAC..CTTCGGCT tRNA-Lys-CTT-1-1 Sc: 76.6 GCCGGGGTAGCTCAATCGGT..A.GAGCGTGTGG...CTCTTAtaatgggtcttgaacccagaaaagaac.........................................................................................................................ACCTC.AAG..................GtCGTGGGT....TCGAGCCCCAC..CTTCGGCT tRNA-Lys-CTT-1-2 Sc: 76.1 GCCGGGGTAGCTCAATCGGT..A.GAGCGTGTGG...CTCTTAtatgggtctcgcacccagaaaaaggac.........................................................................................................................ACCTC.AAG..................GtCGTGGGT....TCGAGCCCCAC..CTTCGGCT tRNA-Lys-CTT-1-3 Sc: 76.1 >>>>>>>..>>>>...........<<<<.>>>>>..............................................................................................................................................................<<<<.<.......................>>>>>...........<<<<<..<<<<<<<. GGCTCTATGGTGCAAC.GGTc.A.GCACATCTGA...CTCTTAtacgttgaaggtgagggagtttagtcttatgactatcagcttccgaaccacgtacttgcattctgctcttcacgatcgtgaagaacatttgaaatcaagttacgtctcggttgggatctgggggcttctcacaaattcttctcgtgagTTTGG.AAG..................A.CCTACGT....TCGATTCGTAG..TGGGGCCA tRNA-Lys-CTT-3-1 Sc: 49.0 >>>>>>>..>>>>...........<<<<.>>>>>..............................................................................................................................................................<<<<.<..>................<....>>...............<<...<<<<<<<. GCCGGGGTAGCTCAATCGGT..A.GAGCGTGTGG...CTCTTAaaagcattcattgcaatgcaacgagatcacctcaaggtcgtgggtgtaagttgattatcacaccaca.................................................................................ACCAC.AAGTTTACAT.......ACTAAtTATGACTgcagTCGAGCCCCAC..CTTCGGCT tRNA-Lys-CTT-2-1 Sc: 42.2 >..>>>>..>>>>...........<<<<.>>>>>..............................................................................................................................................................<<<<.<.......................>>>>>...........<<<<<..<<<<..<. GCATCCATGGTGCAGT.GGCatA.GCACATCCTG...TCTTCAtcacaacg............................................................................................................................................GCAGG.AAG..................A.CCTACGT....TCGATTCGTAG..TGGAACCA tRNA-Lys-CTT-5-1 Sc: 29.5 >>>>>>>..>>>.............<<<.>>>>>..............................................................................................................................................................<<<<.<.......................>>>>>...........<<<<<..<<<<<<<. GGGCATCTGGTCCAAT.GGT..A.AGATCCGTACgagCTCTTGcggccacaggccgaaccctccagctctcagaatcgtgaggctgcaactcgagctgtttaggctgctccgagtaaaggtgtgattact.............................................................CGTAC.GGG..................A.TCCCGGT....TCAAGTCTGGG..GATGTCCA tRNA-Lys-CTT-4-1 Sc: 26.1 >>>>>>>..>>>>...........<<<<.>>>>>..............................................................................................................................................................<<<<.<.......................>>>>>...........<<<<<..<<<<<<<. GAGAGCTTAACTTAAT.GGT..A.AAGTATGTGA...CTTTTA....................................................................................................................................................ATCATtGTA..................A.TATGAGT....TCGAATCTCAT..AGCTCTTA tRNA-Lys-TTT-1-1 Sc: 42.0 >>>>>>>..>>.>...........<.<<.>.>>>..............................................................................................................................................................<<<..<.........................>>>...........<<<....<<<<<<<. TCCCACGTGGCACAATTGGCt.A.GCGCGTGAGA...CTTTTAgcaacaagagaatctcgtatgtatccgatgtcacgacggagtgatcgaaagattctaacaagttcgacagaaggttgagtgagtctgaaatccatgttccagcatatctaaaccacttactaacgtc.....................CTTTG.AAG.......................GAGT....TCGAGCCTCTC..CGTGGGAG tRNA-Lys-TTT-2-1 Sc: 25.9
Met tRNAs
>>>>>>>..>>>>...........<<<<.>>.>>>.........................................................................................<<<<<...................>>>>>.............<<<<<<<<<<<<. GGTTCCGTGGTGCAGT.GGCcaA.GCACATCtGGACTCATGttggcttagctttggctcatgctcaccagctgggtcattgcggtcatcttcaggccggctacctgag...............ATCCGAAG..............A.CCTGCG....TTCGATT..CGCAGCGGAACCG tRNA-Met-CAT-1-1 Sc: 55.5 >>>>>>>..>>>>...........<<<<.>>.>>>.........................................................................................<<<<<...................>.>>>.............<<<.<<<<<<<<. AGCTTCATAGTTCAGT.GGCc.A.GAACACA.AGGCTCATG..................................................................................ACCTTGCA..............A.CCCATG....TTCGATT..CATAGTGAAGCTA tRNA-Met-CAT-2-1 Sc: 55.0 >>>.>>>..>>>>...........<<<<.>>.>>>.........................................................................................<<<<<...................>>>>>.............<<<<<<<<.<<<. GCCCGAGTAGTTCAATGGGTt.A.GAACATT.AATTTCATG..................................................................................CATTAATA..............A.TGAGAA....TTCGAGT..TTCTCCTCTGGCT tRNA-Met-CAT-4-1 Sc: 36.8 >>>>>>>..>>>>...........<<<<.>>.>>>.........................................................................................<<<<<...................>>>>>.............<<<<<<<<<<<<. AAGGTTATAGCTTAATTGGT..A.AAGCAAG.CTGCTCATG..................................................................................ATAGCTCA..............GaTGAGTG....TTCGATT..CATTCTAGCCTTA tRNA-Met-CAT-5-1 Sc: 31.1 >>>>>>>..>>>>...........<<<<.>...>...........................................................................................<..<...................>>>>>.............<<<<<<<<<<<<. AGCACTGTGGCGCAGC.GGA..A.GCGCGTA.AG.TTCTTActccatcgattacttccctcgagcacaacactaacaacatcacaggccgggctcatagacaaagtcttggcaa.........CCCGGAGG..............G.CCTCGG....ATCGAAA..CCGAGCAGTGCTA tRNA-iMet-CAT-1-1 Sc: 28.6 >>>.>>>..>>>>...........<<<<.>...>>.........................................................................................<<..<..>>>........<<<...>>.>>.............<<.<<<<<.<<<. GCCCGGATAGTATAGC.GGTt.A.GTACATC.GGTCTCATAcgacagtatgattgagcataagctcgaggaatccgaaaatctgagttgtgagtttcaccacaatgatcactgcatcgtttggAACACATTGTT........AACG.CCTCAGgcag..CGATT..CTCAGTCCAGGCA tRNA-Met-CAT-3-1 Sc: 21.7
Phe tRNAs
>>>>>>>..>>>>...........<<<<.>>>>.......................................................................................................................................................................................................................<<<<................>>>>>.......<<<<<<<<<<<<. GCTCGAGAAGCTCAACCcGGT.A.GAGCGGAACTCTGAAG..............................................................................................................................................................................................................ATGTTTAG...........GtTATAAGTTCAAATCTTATCTCGAGCA tRNA-Phe-GAA-1-1 Sc: 53.2 >>>>>>>..>>>>...........<<<<.>>>>>.....................................................................................................................................................................................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGTTCCATGGTGCAAT..GGAaA.GCATACCTGCCTGAAAgcacgtgtgggacgcagtgttggacattaagttgtctgtagcactgcgcacccctcccgcgtctgcctgcttgtcattcgacttctggtattccgttagggtatcatgtttcaaacaatcgttgggatcttgggggcttctacttctggtattccgtcagggtatcatgttcaaacaattgttgggatcttgggggcttctcaggtCGCAGGAG...........A.TCTACGTTCGATTCGTAGTGGGACCA tRNA-Phe-GAA-3-1 Sc: 48.9 GCCTATATAGTATAAT..AGTtA.GTATACTAGATAGAAAtagtatacttatagattactctaagctataaggcggccta......................................................................................................................................................................ATCTAGAG...........A.TATAGGTTTAAATCCTATTATAGGTA tRNA-Phe-GAA-2-1 Sc: 32.3
Pro tRNAs
>>>>>>......>..>>>...........<<<.>>..>.>>................................................................<<<<<....................>>>>>.......<<<<<.<<<<<<<. GCAGCT......TTGGTCTAGAGGTA..TGATTCT..T.GCTTAGGGatacaccgaac..............................................TGCAAGAG...............GtCCCAGGTTCGATCCCTGG.AAGCTGCC tRNA-Pro-AGG-1-1 Sc: 59.4 >>>>>>......>..>>>...........<<<.>>..>.>>................................................................<<<<<....................>>>>>.......<<<<<.<<<<<<<. GGCGCT......TTGGTCTAGTGGTA..TGATACC..T.GCTTCGGGttttaaaccctgatagatttaatctatcgcttc........................TGTAGGTG...............GtCCCCAGTTCAAGCCTGGG.AAGCGCCC tRNA-Pro-CGG-1-1 Sc: 54.7 >>>>>>......>..>>>...........<<<.>>..>.>>................................................................<<<<<..>>>.........<<<...>>>>>.......<<<<<.<<<<<<<. GCCAGA......GTGGTGGAAGGGTAg.ACACACC..GcGATTCGGG.........................................................ATCCGGC.GCTT.......CGGCA.TGAGGGTTTGAGTCCCTC.CTTTGGCA tRNA-Pro-CGG-2-1 Sc: 37.4 ....>.......>..>>>...........<<<.>>..>.>>................................................................<<<<<....................>>>>>.......<<<<<.<.<..... ....AG......ATGGTCTAGTGGTA..TGATTCT..T.GCTTTGGGatttatctctgac............................................TGCAAGAG...............GcCCCGTGTTCGATCCACGG.TGTAAGTT tRNA-Pro-TGG-2-1 Sc: 43.5 >>>>>>......>..>>>...........<<<.>>..>.>>................................................................<<<<<....................>>>>>.......<<<<<.<<<<<<<. ACGGATtcgcagATGGTCTAGTGGTA..TGATTCT..T.GCTTTGGGtttaccttgac..............................................TGCAAGAG...............GcCCCGTGTTCGATCCACGG.TGTTCGTA tRNA-Pro-TGG-1-1 Sc: 43.0 >...........>..>>>...........<<<.>>..>.>>................................................................<<<<<....................>>>>>.......<<<<<.<.....<. G...........ATGGTCTAGTGGTA..TGATTCT..T.GCTTTGGGctttacaccttgac...........................................TGCAAGAG...............GcCCCGTGTTCGATCCACGG.TGTT..CG tRNA-Pro-TGG-3-1 Sc: 39.7 >>>>>>......>..>>>>.........<<<<.>>....>>................................................................<<.<<....................>>>>>.......<<<<<.<<<<<<<. GGAGAA......ATGGTCTAGTGGTA..GGGCACAggC.GACCTGGAttcattacaggttgggtgattcattagcccatacttcattcattcataataagtatgTTC.TGG................A.TGTCAGTTCGAGTCTGAC.TTTCTCCA tRNA-Pro-TGG-4-1 Sc: 31.6
SeC tRNAs
Ser tRNAs
>>>>>>>..>>>..............<<<.>>>>>.....................................................................<<<<<..>>>>..............<<<<...>>>>>.......<<.........<<<.<<<<<<.<. GGCGAGATGGCAG.AGCGGTct.A.ATGCGATAGA..C.TAGAA...........................................................ATCTATT.CTCT...TC.........GGAGG.CGTCGGTTCAAATCC.........GAC.TCTCGT.CG tRNA-Ser-AGA-1-1 Sc: 72.1 >>>>>>>..>>>>............<<<<.>>.>>.....................................................................<<.<<...........................>>>>>.......<<.........<<<.<<<<<<.<. GGAGAAATGGTCT.AGTGGT...A.GGGCACAGGCgcC.TCGAAtcgttagaggtgggcaattcattagcccatgcttcattccttgataata..........AGCATGT........TCTG...........GaTGTGCGTTCGAGTCG.........CAC.TTTCTC.CA tRNA-Ser-CGA-2-1 Sc: 39.8 >.>>>>>..>>>..............<<<.>>>>>.....................................................................<<<<<..>>>>>............<<<<<...>>>>>.......<<.........<<<.<<<<<..<. G.CGTTGTAGCAA.AGTGGTt..A.CTGCGTTTGA..C.TCGAAtgctctatctttcggcc..........................................ATCAAAT.CCCTT............AGGGGG.CGTAGGTTCGAGTCCgtgagtgatTAC.CAACGAaCA tRNA-Ser-CGA-1-1 Sc: 28.2 >>>>>>...>>.>............<.<<.>>.>>.....................................................................<<.<<...........................>>>>>.......<<.........<<<..<<<<<.<. GGAGAAGTGGTCT.AGGGGTcgg..GCACAGGCGC..C.TCGAAtcgttagaggtgggcgaatcattagcccatgcttcattccttgataacaagca......TGCTCTGG......................A.TGTCAGTTCGAGTCT.........GAC.GTTCTC.CA tRNA-Ser-CGA-4-1 Sc: 25.5 >>>>>>>..>>>>............<<<<.>>>.>.....................................................................<.<<<..>.>................<.<...>>.>>.......<<..........<<.<<<<<<.<. GGGGATCTGGTCTcAATGGT...A.AGATACGCAG..TgTGGCGcatctcttgtgggacact.........................................CCCGCGCGCGCGCATGCT.g.....TAGGGA.TGCTGGTTCGAATCC.........TGC.GGTCTC.CA tRNA-Ser-CGA-3-1 Sc: 20.8 >>>>>>>..>>>>............<<<<.>>>>>.....................................................................<<<<<..>>>>>............<<<<<...>>>>>.......<<.........<<<.<<<<<<.<. AGAGAATTGGCTG.AGTGGTtt.A.TAGCGGTAAG..C.TTGAA...........................................................ACTTATTTGGTTT..AAT.......AGACCA.CATCCGTTCGAATCG.........GAT.ATTCTC.TG tRNA-Ser-TGA-1-1 Sc: 44.3 >>>>>.>..>>>..............<<<.>>>>>.....................................................................<<<<<...........................>>>>>.......<<.........<<<.<.<<<<.<. GGGGATGTGGTCC.AATGGT...A.AGATCCTCGA..C.CACTActgggtctccccagcggttccggggtctcacccgcgaagtcatcgagcgatgactcttgGTCGAGGG......................A.TGTGAGTTCGATTCT.........CAC.CTTCTC.CA tRNA-Ser-ACT-1-1 Sc: 40.1 >>>>>.>..>>>>............<<<<.>>>>>.....................................................................<<<<<...........................>>>>>.......<<.........<<<.<.<<<<.<. GGCATCTTAGCTC.AATGGT...A.GAGCGCTCAG..A.CACTAtctccggccctgcgtccgcgtgagacgcgggcgaaagggcctggag.............TCTGAGAG......................GtCGGTCGTTCGATTCG.........ATC.ACATGC.CA tRNA-Ser-ACT-2-1 Sc: 35.5
Sup tRNAs
Thr tRNAs
>>>>>>>..>>>>...........<<<<..>>>>>.....................................................................................................................................................................<<<<<................>>.>>>.......<<<<<....<<<<<<<. GCCCTCATAGCTCAGTGGT...A.GAGCG.CGTCACTAGTAcgatacagcctcctgcatactgtgcagccgtc..............................................................................................................................ATGACGAG...........GtCTT.TGGTTCGATCCCAGA....TGAGGGCA tRNA-Thr-AGT-1-1 Sc: 74.2 GCCCTCTTAGCTCAGGGGT...A.GAGCG.CGTCACTAGTAtttagacctcctgcgttctgcgcagcgat.................................................................................................................................ATGACGAG...........GtCAT.TGGTTCGAATCCAGT....AGAGGGCA tRNA-Thr-AGT-2-2 Sc: 72.1 GCCCTCTTAGCTCAGGGGT...A.GAGCG.CGTCACTAGTActttcacaggtgtatatcaccttgaaataacacgacctcctgcacacagtgcagcgga....................................................................................................ATGACGAG...........GtCAT.TGGTTCGAATCCAGT....AGAGGGCA tRNA-Thr-AGT-2-1 Sc: 71.0 >>>>.>>..>>>>...........<<<<..>>>>>.....................................................................................................................................................................<<<<<................>>.>>>.......<<<<<....<<.<<<<. GGTCCCGTGGTGCAATGGTt..A.GCACA.TCCACTGCGTAagtacattcgtgggttctggcctcttccttaggagggttctcgggggcgcccgcatacatggagcatttcgctctcatgacgcgcgtagggtcattcttacgttactccctcgttgtacggttgtatcgcccagtgttgagtgccgcacgaaagcgtgTGTGGAAG...........A.TCT.GCGTTCGATTCGCAG....CGAGACCA tRNA-Thr-CGT-1-1 Sc: 36.4 >>>>>>>..>>>.............<<<..>>>>>.....................................................................................................................................................................<<<<<................>>.>>>.......<<<<<....<<<<<<<. GCTGATCTGGTCCAACGGT...A.AGATA.CAGGATATGTAgtc...........................................................................................................................................................TTCCTGGG...........A.TGCgTGGTTCGATTCCGGC....GGTCAGCA tRNA-Thr-TGT-4-1 Sc: 37.0 >>..>>>..>>>>...........<<<<..>>>>>.....................................................................................................................................................................<<<<<...................>>>.......<<<......<<<..<<. GCCCCTATAGCTCAGTGGC...A.GAGCG.CAGCACTTGTAttgtatagcataaacaagttc.........................................................................................................................................ATGCTGAG...........GtCCT.TCGTTCAATCCGGTAtgttTGGTTGCC tRNA-Thr-TGT-1-1 Sc: 31.3 >>>>>>>..>>>>...........<<<<..>>>.........................................................................................................................................................................<<<................>>.>>>.......<<<<<....<<<<<<<. GGTGGTATAGTATAGTGGTt..A.GTACA.GCTCGTTGTGGttctgtgactcatatcgcattcaatccgaggtaaaatccaaaaaaatgtaccatctctgtgacgcttgctaacctcct................................................................................CATAGCAG...........A.CAC.AGGTCCGATTCCTGT....TACCGCCA tRNA-Thr-TGT-2-1 Sc: 29.8 >..>>>>..>>.>...........<.<<..>>.>>.....................................................................................................................................................................<<.<<................>>.>>>.......<<<<<....<<<<..<. GCCTCGATGGCGCAGTGGTgtaA.GAGCTtTCACGCTTCCAtcgtcttctcaggttgctgatgggtttgacagaacgcgtcgcacttgta.............................................................................................................ATGCGAAG...........AtCCC.TAGTTCAATTCTGGG....TCGGTATG tRNA-Thr-TGT-3-1 Sc: 24.1
Trp tRNAs
>>>>..>..>>>..........<<<.>>>>>........................................................................................................................................................<<<<<...............>>>>>.......<<<<<<..<<<<. GGGGTTGTGGTCCAATGGCA.AGACACTCATCTCCAAtccaactgaagtgcgagggacatgtactctcgtagtgtgaagtggggggtgtagctcccgcagcactgaggacttggtcgatacaagcgatttcatagccacaatcagtgcgctgcaggagcgacgcgaatgcagagggggccgaGGTGAGGG...........ACGCCAGTTCGAATCTGGCCTTCTCCA tRNA-Trp-CCA-1-1 Sc: 29.0
Tyr tRNAs
.>>>>>>..>>>>...............<<<<.>>>>................<<<<.....................>>>>>.......<<<<<.<<<<<<.. CTTCCTATGGTGT..AGT.GGTcT....GCACATCTG..TGATAtaattcA..CAGAAG................G.TCTGCGTTCGAGTCGCAG.TGGGGGTT tRNA-Tyr-ATA-1-1 Sc: 25.5 >>>>>>>..>>>>...............<<<<.>>>>>..............<<<<<..>>>>........<<<<...>>>>>.......<<<<<.<<<<<<<. AGGAAGGTTCTATtt.GTTGGT.A.tg.ATGGGTTGAGCTGTAA......A.CTCAAT.AGCTA......AGGCTGtCGAAGGTTCGATTCCTTT.TCTTCCTA tRNA-Tyr-GTA-1-1 Sc: 20.2
Val tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<. AAGGAATTAGCTTAATTGGTAGAGCAACCGTTTTACACACGGTAG...........GtTAGGTGTTCAAGTCACCTATTCCTTA tRNA-Val-TAC-1-1 Sc: 53.7