tRNA Gene Summary

Overview
High confidence set 567
tRNAs decoding standard 20 AA 567
Selenocysteine tRNAs (TCA) 0
Notable atypical predictions  
Anticodon/isotype mismatch 12
Unexpected anticodons 1
Non-canonical anticodon loop length 1
Other tRNA-like predictions  
Primary filter (tRNAscan-SE pseudogenes) 161
Secondary filter (low feature scores, possible rep. element) 84

Note: tRNA predictions in mitochondria and nuclear mitochondrial sequences (NUMTs) are not included in the current version of the database.

Intron Summary (tRNAs with introns: 31)
Ser AGA
1
Met CAT
14
Tyr GTA
16
Four Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
AlaAGC
20
GGC
 
CGC
5
TGC
17
42
GlyACC
 
GCC
23
CCC
7
TCC
15
45
ProAGG
14
GGG
 
CGG
4
TGG
17
35
ThrAGT
6
GGT
 
CGT
4
TGT
10
20
ValAAC
17
GAC
 
CAC
10
TAC
8
35
Six Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
SerAGA
13
GGA
 
CGA
4
TGA
9
ACT
 
GCT
16
 
 
 
 
42
ArgACG
8
GCG
 
CCG
4
TCG
7
 
 
 
 
CCT
8
TCT
11
38
LeuAAG
14
GAG
 
CAG
6
TAG
8
 
 
 
 
CAA
12
TAA
6
46
Two Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
PheAAA
 
GAA
19
 
 
 
 
19
AsnATT
 
GTT
21
 
 
 
 
21
Lys 
 
 
 
CTT
16
TTT
14
30
AspATC
 
GTC
31
 
 
 
 
31
Glu 
 
 
 
CTC
21
TTC
14
35
HisATG
 
GTG
12
 
 
 
 
12
Gln 
 
 
 
CTG
10
TTG
10
20
Two Box and Other tRNA Sets
IsotypetRNA Count by AnticodonTotal
IleAAT
20
GAT
 
CAT
 
TAT
7
27
iMet/Met 
 
 
 
CAT
12/14
 
 
26
TyrATA
 
GTA
17
 
 
 
 
17
Supres 
 
TCA
 
CTA
 
TTA
 
0
CysACA
 
GCA
12
 
 
 
 
12
Trp 
 
 
 
CCA
14
 
 
14
SelCys 
 
 
 
 
 
TCA
 
0