tRNA Gene Summary

Overview
High confidence set 430
tRNAs decoding standard 20 AA 428
Selenocysteine tRNAs (TCA) 2
Notable atypical predictions  
Anticodon/isotype mismatch 3
Unexpected anticodons 3
Other tRNA-like predictions  
Primary filter (tRNAscan-SE pseudogenes) 89
Secondary filter (low feature scores, possible rep. element) 96

Note: tRNA predictions in mitochondria and nuclear mitochondrial sequences (NUMTs) are not included in the current version of the database.

Intron Summary (tRNAs with introns: 29)
Arg TCT
6
Leu CAA
5
Ile TAT
5
Tyr GTA
13
Four Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
AlaAGC
21
GGC
 
CGC
5
TGC
8
34
GlyACC
 
GCC
10
CCC
9
TCC
7
26
ProAGG
12
GGG
 
CGG
5
TGG
10
27
ThrAGT
10
GGT
 
CGT
4
TGT
6
20
ValAAC
9
GAC
 
CAC
11
TAC
6
26
Six Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
SerAGA
9
GGA
 
CGA
4
TGA
4
ACT
 
GCT
9
 
 
 
 
26
ArgACG
7
GCG
 
CCG
5
TCG
6
 
 
 
 
CCT
7
TCT
7
32
LeuAAG
7
GAG
 
CAG
6
TAG
3
 
 
 
 
CAA
6
TAA
4
26
Two Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
PheAAA
 
GAA
11
 
 
 
 
11
AsnATT
 
GTT
13
 
 
 
 
13
Lys 
 
 
 
CTT
21
TTT
14
35
AspATC
 
GTC
10
 
 
 
 
10
Glu 
 
 
 
CTC
4
TTC
9
13
HisATG
 
GTG
12
 
 
 
 
12
Gln 
 
 
 
CTG
14
TTG
5
19
Two Box and Other tRNA Sets
IsotypetRNA Count by AnticodonTotal
IleAAT
13
GAT
2
CAT
 
TAT
5
20
iMet/Met 
 
 
 
CAT
10/12
 
 
22
TyrATA
 
GTA
13
 
 
 
 
13
Supres 
 
TCA
 
CTA
 
TTA
 
0
CysACA
 
GCA
35
 
 
 
 
35
Trp 
 
 
 
CCA
8
 
 
8
SelCys 
 
 
 
 
 
TCA
2
2