Structurally Aligned tRNAs (by Isotype & Anticodon)

Structural alignments are generated by aligning tRNA sequences against domain-specific tRNA covariance models with the use of COVE.

Ala tRNAs
>>>>>>>..>>>...........<<<......>>>>>.................................................................<<<<<...................>>..>>>.........<<<.<<..<<<<<<<. GGGCTTGTGGTTTAGT.GGTA.TAATA.....CTCCCTTAGCA..........................................................TGGGAGTG..............GtCCA..GGGTTCG..ATTCCC.TG..CAAGTCCA tRNA-Ala-AGC-1-1 Sc: 72.1 >>>>>>>..>>>...........<<<......>>>>...................................................................<<<<...................>.....>.........<....<..<<<<<<<. GGGCTCGTGGTTTAGT.GGTA.TAATActcccTTAGCATGGGAgtggtccgggggtgagttgacatcgcaccttgttacaaggtttcattcg.........TACTAAC...............AtCCAatTAGTTCG..ATTCCCc.G..CGAGTCCA tRNA-Ala-AGC-4-1 Sc: 34.4 >>>>>>>..>>>...........<<<.......>.......................................................................<....................>.....>.........<....<..<<<<<<<. GGGCTCGTGGTTTAGT.GGTA.TAATA.....CTCCCTTAGCAtgggagtggtccgggggtaagtcacaactcgcaccttccagataaggtttacagtcgtACTAACAATCT...........G.CTT...AGTTCG..ATTCCCc.G..CGAGTCCA tRNA-Ala-AGC-2-1 Sc: 32.5 >>>.>>>..>>>...........<<<......>>>>>.................................................................<<<<<...................>...>>>.........<<<..<..<<<.<<<. GGGCTTGTGGTTTAGT.GGTA.TAATA.....CTCCCTTAGCA..........................................................TGGGAGTG..............GtCCA..GGGTTCGgtAAGCTT.AG..CAAACTCA tRNA-Ala-AGC-3-1 Sc: 30.7 ..>>>>>..>>>...........<<<......>>>>>.................................................................<<<<<...................>>..>>>.........<<<.<<..<<<<<... ..GCGCTTGGTCTAGG.GGTA.TGATT.....TTCGCTTCGCAtaagcaaacgtgcgtaatt.......................................TGTGAAAG..............GtCGT..GGGTTCA..ATTCCC.AC..AGCGTC.. tRNA-Ala-CGC-1-1 Sc: 39.3 .>.......>>>...........<<<......>>>>>.................................................................<<<<<...................>>..>>>.........<<<.<<.......<.. AC......AGTCTAGG.GGTA.TGATT.....TTCGCTTCGCAtcagtaaatgtgcgtaatt.......................................TGTGAAAG..............GtCGT..GGGTTCA..ATTCCC.AC..A....GCG tRNA-Ala-CGC-2-1 Sc: 29.1 >>>>>.>..>>>>.........<<<<......>>>>>.................................................................<<<<<...................>>..>>>.........<<<.<<..<.<<<<<. GGGCGTGTGGCTCAGT.GGTA.GAGCG.....TCCGCTTTGCAtcctccacgaagca............................................TGCGGAAG..............GtCCA..GGTTTCG..ATCACC.TG..CCCGTCCA tRNA-Ala-TGC-1-1 Sc: 59.1 GGGCGTATAGCTCAGT.GGTA.GAGCG.....CCCGCTTTGCAtcaagcaaaat...............................................TGCGGGAG..............GtCTG..GATTTCG..ATCATC.CA..TCCGTCCA tRNA-Ala-TGC-2-1 Sc: 50.7 >>>>>>>..>>>>.........<<<<......>>>>>.................................................................<<<<<...................>>..>>>.........<<<.<<..<<<<<<<. GGGGATATAGTTTAATTGGTA.AAACT.....GCGATTTTGCA..........................................................TATCGTT...............AtTTT..AGGATCG..AGTCCT.AA..TATCTCCA tRNA-Ala-TGC-3-1 Sc: 42.3
Arg tRNAs
>>>>>>>..>>>...........<<<.>>>>>..........................................................................................<<<<<..................>>>>>....................<<<<<........<<<<<<<. GGCCTAATGGCCCAAT.GGCA.AGGCGCTTGACTACGAcccagttcggcaa......................................................................ATCAAGAG.............AtTCCAGGT...TCGACC..........CCTGG........TTAGGTCA tRNA-Arg-ACG-1-1 Sc: 64.9 >>>>>>>..>>>>.........<<<<.>>>>>..........................................................................................<<<<<..................>>>>>....................<<<<<........<<<<<<<. GGTGCGTTAGTTAAATTGGTA.TAACGACATGCTACGG...................................................................................ACATGTT..............CtTACAAGT...TCGAGT..........CTTGT........ACGCACTT tRNA-Arg-ACG-2-1 Sc: 40.7 >>>>>>>..>>>...........<<<...>>>..........................................................................................<<<....................>>>........................<<<........<<<<<<<. GGCCTAATGGCCCAAT.GGCA.AGGCGCTTGACTACGAtttattcgatatcaagagattccaggttgtaagtagtaccactcagaacaacatctgttcgaaca..................TTCACTA..............A.CCCACAAcag.CGACC..........CCTGG........TTAGGTCA tRNA-Arg-ACG-4-1 Sc: 32.4 >>>>>>>..>>>...........<<<..>>>............................................................................................<<<....................>>>......................<<<.........<<<<<<<. GGCCTAATGGCCCAAT.GGCA.AGGCGCTTGACTACGAtttcacgtccaaatcaagagattccaggttgtaagtttacaccacaccacaccacctgatcaatcggtccttcgagtcagttgACTAACA.TT...........GtTACAG......CGACC..........CCTGG........TTAGGTCA tRNA-Arg-ACG-3-1 Sc: 26.2 >>>>>>>..>>>>.........<<<<.>>>>>..........................................................................................<<<<<..................>>>>>....................<<<<<........<<<<<<<. GGCACCATGGCCTAAT.GGTA.AGGCGTTGCTTTCCGGttaaattcga.........................................................................TGGCAAAG.............AtTGTGGGT...TCGAGT..........CCCAC........TGGTGTCG tRNA-Arg-CCG-1-1 Sc: 58.7 >>>>>>>..>>>>.........<<<<.>>>>>..........................................................................................<<<<<..................>>>>>....................<<<<<........<<<<<<<. GGAGCCTTGGCGCAAT.GGTA.GCGCGTTGGTTTTCGGcttgtgcctgtta......................................................................CACCAAAG.............GtTGAGGGT...TCGAGC..........CCCTT........GGGCTTCG tRNA-Arg-TCG-1-1 Sc: 55.4 >..>>>...>>>>.........<<<<.>>>>>..........................................................................................<<<<<..................>>>>>....................<<<<<.........<<<..<. GCCTTG...GCGCAAT.GGTA.GCGCGTTGGTTTTCGGtcagagaacacttta....................................................................CACCAAAG.............GtTGTGGGT...TCGGTAagctttgt..CCCAC..tcttc.ATGAACCG tRNA-Arg-TCG-2-1 Sc: 30.3 >>>>>>>..>>>>.........<<<<.>>>>>..........................................................................................<<<<<..................>>>>>....................<<<<<........<<<<<<<. GGCCGGTTGGCGCAAT.GGTA.GCGCGCAGCCCTCCTAtagaagccattcttcaggac...............................................................AGGCTGAG.............GcTGTGGGT...TCGAGT..........CCCAC........ATCGGTCG tRNA-Arg-CCT-1-1 Sc: 71.7 GGCCGGTTGGCGCAAT.GGTA.GCGCGTGGCCCTCCTA...................................................................................AGGCCAAG.............GtTGCGCGT...TCGAGT..........CGCGT........GCTGGTCG tRNA-Arg-CCT-2-1 Sc: 64.0 >>>>>>>..>>>>.........<<<<..>>>>..........................................................................................<<<<...................>>>>>....................<<<<<........<<<<<<<. TTCTTATTAGTTTAAT.GGTA.GAACAAGATATTCCTA...................................................................................ATATCCTA.............A.TCTAAGT...TCGAGT..........CTTAG........ATAAGAAT tRNA-Arg-CCT-3-1 Sc: 44.7 >>>>>>>..>>>>.........<<<<.>>>>>..........................................................................................<<<<<..................>>>>>....................<<<<<........<<<<<<<. GTCTCGGTGGCGCAAT.GGTA.GCGCGTTGGACTTCTActattaaaaccagtac...................................................................ATCCAAAG.............GcTGCGGGT...TCGAGC..........CCCGC........CCGAGATG tRNA-Arg-TCT-1-1 Sc: 77.8
Asn tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......................<<<<<................>>>>>.......<<<<<<<<<<<<. TCCTCCGTGGCGCAATTGGCtA.GCGCGTCTGACTGTTAcagtgctgtggctc..ATCAGGAG...........GtTGAAAGTTCGAGCCTTTCCGGGGGAG tRNA-Asn-GTT-1-2 Sc: 65.1 TCCTCCGTGGCGCAATTGGCtA.GCGCGTCTGACTGTTActattaaagtggctt.ATCAGGAG...........GtTGAAAGTTCGAGCCTTTCCGGGGGAG tRNA-Asn-GTT-1-3 Sc: 65.1 TCCTCCGTGGCGCAATTGGCtA.GCGCGTCTGACTGTTAcagcttctgtggcgatATCAGGAG...........GtTGAAAGTTCGAGCCTTTCCGGGGGAG tRNA-Asn-GTT-1-1 Sc: 65.0 GCTTTTATAGCTCAAT.GGT.A.GAGCGGAATACTGTTA................ATATTCTG...........A.TAAATGTTCGATTCATTTTAAAGGCT tRNA-Asn-GTT-2-1 Sc: 53.5
Asp tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>............................<<<<<................>>>>>.......<<<<<<<<<<<<. TCTTCAGTCGTATAGTGGTtA.GTATTTCCGCTTGTCAtcgtctacacgacgacaagttCGCGGGAG...........A.CCTGGGTTCAATTCCCAGCTGGAGAG tRNA-Asp-GTC-1-1 Sc: 51.4 TCTTCAGTCGTATAGTGGTtA.GTATTTCCGCTTGTCAtcgtctacacgacggcaatttCGCGGGAG...........A.CCTGGGTTCAATTCCCAGCTGGAGAG tRNA-Asp-GTC-1-2 Sc: 51.4 >>>>>>>...>>>.........<<<..>>>>>............................<<<<<................>>>>>.......<<<<<<<<<<<<. GGGTCAGTAACTTAATGGT.A.GAGGACTTTCTTGTCA.....................CGAAAGTA...........GaTATCGGTTCAAGCCCGGTCTGACTCG tRNA-Asp-GTC-2-1 Sc: 32.4
Cys tRNAs
>>>>>>>..>>>>........<<<<.>.>>>........................<<<.<................>>>>>.......<<<<<<<<<<<<. GGGCCGGTAACTCAGTGGTA.GAGTGTAGGACTGCAGcacattcacatgctttgTTCCCGAA...........GcCACCGGTTCGACTCCGGTTCGGCCCT tRNA-Cys-GCA-1-1 Sc: 51.8 GGGCCGGTAACTCAGTGGTA.GAGTGTAGGACTGCAGcatacacacgtgctttgTTCCCGAA...........GcCACCGGTTCGACTCCGGTTCGGCCCT tRNA-Cys-GCA-1-2 Sc: 51.8
Gln tRNAs
>>>>>>>..>>>...........<<<.>>>>>.........................<<<<<...............>>>>>.......<<<<<<<<<<<<. GGTTTTGTAGTGTAGCGGTtA.TCACTCCGGATTCTGAtcttgtctattagaagctTTCCGGCA...........ACCCCAGTTCGATTCTGGGCAAGACCT tRNA-Gln-CTG-1-1 Sc: 55.5 GGTTTTGTAGTGTAGCGGTtA.TCACTCCGGATTCTGAtagcatgtcagtagct..TTCCGGCA...........ACCCCAGTTCGATTCTGGGCAAGACCT tRNA-Gln-CTG-1-2 Sc: 55.5 >>>>>>>..>>>...........<<<.>>>>>.........................<<<<<...............>>>>>.......<<<<<<<<<<<<. GGTTGCGTAGTGTAGTGGTtA.TCACTCCAGATTTTGActcacatcaaca......TTCTGGTA...........ACCCCGGTTCGAGCCCGGGCGCGACCT tRNA-Gln-TTG-1-1 Sc: 63.0
Glu tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>..................................<<<<<.................>>>>>.......<<<<<.<<<<<<<. TCCGATATGGTCTAGTGGCtA.GGATTTGCCGCTCTCAagcagagtcagctcactgtaacacgtgCCGGCAAG.............GCCCGGGTTCGATTCCCGG.TGTCGGAA tRNA-Glu-CTC-1-1 Sc: 62.0 >>>>>>>..>>>...........<<<.>>>>>..................................<<<<<.................>>>>>.......<<<<<.<<<<<<<. GGCCCAATAGTCAAGTGGTtA.AGACGTAACATTTTCA...........................CTGTTAA.AT...........GCGCGGGTTCAAACCCCGC.TTGGGCTT tRNA-Glu-TTC-3-1 Sc: 63.3 >>>>>>>..>>>>.........<<<<.>>>>>..................................<<<<<.................>>>>>.......<<<<<.<<<<<<<. TCCGAATTAGTCCATCGGTtA.GGATATCTCGCTTTCAtactttggcg.................CCGAGAAG.............AGCCGGGTTCAACTCCCGG.ATTCGGAA tRNA-Glu-TTC-2-1 Sc: 49.6 TCCGGTATGGTGTATCGGCtA.GCATCCGTCGCTTTCAtcctgatgtcagctt............CCGACGAG.............AGCCGGGTTCGATTCCCGG.TACCGGAA tRNA-Glu-TTC-1-1 Sc: 43.0
Gly tRNAs
>>>>>>>..>>.>........<.<<.>..............................................................................................<....................>>>>............<<<<...<<<<<<<. GGGGGGATAGCGTAGTGGTA.AAGCGC....CTAGTAttcctctaccgcactctaaatttgtagtgtagt..............................................A....GAG..............GtTAAAGGTTC.GAAT....TCTTC..TCTCCTTA tRNA-Gly-ACC-1-1 Sc: 22.0 >>>>>>>..>>>>........<<<<.>>>.>......................................................................................<.<<<...................>..>..............<..<..<<<<<<<. GCATCGGTGGTTTAGTGGTA.AAATTAGCCGTTGCCAttcacagtttcggctagccccgggttcggtaagtttactcgtatccattcttcgattg.....................TCAGCTCT..............A.ACATGTCTCaGATT....CCCGG..CCGATGCA tRNA-Gly-GCC-2-1 Sc: 33.3 >>>>>>>..>>>>........<<<<.>>>.>......................................................................................<.<<<...................>>..................<<..<<<<<<<. GCATCGGTGGTTTAGTGGTA.AAATTAGCCGTTGCCAtccagcttctgcagcaggacagtttcggctagccccgggttcggtaagtttacttgaatccactcttcgatta......TCAGCTC.TAAC..........GtCCCC...TA.GATT....CCCGG..CCGATGCA tRNA-Gly-GCC-1-1 Sc: 33.0 >>>>>>>..>>>>........<<<<.>>>.>......................................................................................<.<<<...................>>.>..............<.<<..<<<<<<<. GCATCGGTGGTTTAGTGGTA.AAATTAGCCGTTGCCAtccgcttcaggacagtttcggctagccccgggttcggtaagcttgcactctatcttcgtgcattcgattcgttgttctaACAGTTA.................TTCAG......ATT....CCCGG..CCGATGCA tRNA-Gly-GCC-3-1 Sc: 31.3 >>>>>>>..>>>>........<<<<.>>>>>......................................................................................<<<<<...................>>>>>............<<<<<..<<<<<<<. GCGGGAATGGTTTAAGGGTA.AAATCCAAGCTTCCCAcgtttctacgttgtc................................................................TGCTTGGG..............C.TCCGAGTTC.GAGT....CTCGG..TTTCCGCA tRNA-Gly-CCC-1-1 Sc: 45.6 >>>>>>>..>>>>........<<<<.>>>>>......................................................................................<<<<<...................>>>>>............<<<<<..<<<<<<<. GCATTCTTGGTCCAACGGTA.GGATAATTGCCTTCCA...............................................................................AGCAATTG..............G.CCCGGGTTC.AACT....CCCGG..AGGATGCA tRNA-Gly-TCC-1-1 Sc: 70.5 GCATTCTTGGTCCAACGGTA.GGATAATTGCCTTCCA...............................................................................AGCAATTG..............G.CTCGGGTTC.GACT....CCCGG..AGGATGCA tRNA-Gly-TCC-2-1 Sc: 64.8
His tRNAs
Ile tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.........................................<<<<<................>>>>>.................<<<<<<<<<<<<. GGTCGCTTAGCTCAGTTGGTtA.GAGCGTGGTGCTAATAccctatatggtacgcg..................ACGCCAAG...........GtCGCGAGTTCGAC..........CCTCGTAGTGACCA tRNA-Ile-AAT-1-2 Sc: 70.6 GGTCGCTTAGCTCAGTTGGTtA.GAGCGTGGTGCTAATAagcaatatcgcttgtg..................ACGCCAAG...........GtCGCGAGTTCGAC..........CCTCGTAGTGACCA tRNA-Ile-AAT-1-3 Sc: 70.6 GGTCGCTTAGCTCAGTTGGTtA.GAGCGTGGTGCTAATAccatatatggtacgca..................ACGCCAAG...........GtCGCGAGTTCGAC..........CCTCGTAGTGACCA tRNA-Ile-AAT-1-4 Sc: 70.6 GGTCGCTTAGCTCAGTTGGTtA.GAGCGTGGTGCTAATAagcaatatcgcttgtgaaa...............ACGCCAAG...........GtCGCGAGTTCGAC..........CCTCGTAGTGACCA tRNA-Ile-AAT-1-1 Sc: 70.5 >>>>>>>..>>>>..........<<<<.>>>>>.........................................<<<<<................>>>>>.................<<<<<<<<<<<<. GGTTCCTTAGCTTAATAGGT.A.AAGCGCATTCTTGATA..................................AGGATGTG...........A.TCGACGTTCAAT..........TCGTTGAGGAATCA tRNA-Ile-GAT-1-1 Sc: 49.6 .>>>>....>>>>..........<<<<.>>>>...........................................<<<<................>>>>>.................<<<<<..<<<<.. AGTCCTGTGGCGCAGT.GGT.A.GCGCGCCGTTCTTATAagattcgtcagactcttatgacctcatccaggttATGCGGAT...........GcCGTGGGTTCGAAgtgagtttct.CCCACATGGATGG tRNA-Ile-TAT-1-1 Sc: 38.4
Leu tRNAs
>>>>>>>..>>>>...........<<<<....>>......................................................................................................<<............................>>>..............<<<...<<<<<<<. GGTGAGATGGCCGAGTTGGTt.A.TGGCGCCAGGTTAAGGttatcttaacacatattcctggtcacgaaagtggcgtgggtgtaagttattacaatctaatcgagcttattagcttt..................ACTAATAT...................GttCGTGCAG.TCGAGT..CCCAC...TCTCATCA tRNA-Leu-AAG-1-1 Sc: 28.0 >>>>>>>..>>>>...........<<<<..>>.>......................................................................................................<.<<..........................>>.>............<.<<...<<<<<<<. GGTGAGATGGCCGAGTTGGTt.A.TGGCGCCAGGTTAAGGttatcttaacatatattcctggtcacgaaagtggcgtgggtgtaagttgctacattgtaacatattaatttcatttacta...............ATATGTTC...................Gt.TGTAG...TCGAGT..CCCAC...TCTCATCA tRNA-Leu-AAG-2-1 Sc: 27.4 >>>>>>>..>>>>...........<<<<.>..>........................................................................................................<..<..........................>.>............<.<....<<<<<<<. GGTGAGATGGCCGAGTTGGTt.A.TGGCGCCAGGTTAAGGtttcttcttaacacaatttcctggtcacgaaagtggcgtgggtgtaagttcttatactctagccaagattgttagtggatggtttact.......AATAAGT....................G..CATTGCAgTCGAGT..CCCAC...TCTCATCA tRNA-Leu-AAG-3-1 Sc: 24.0 >>>>>>>..>>>.............<<<.>>>>>......................................................................................................<<<<<..>>>.............<<<....>>>>>..........<<<<<...<<<<<<<. GGACAGATGGCCGAGC.GGTt.A.AGGCGCTAGCTTCAGGtgtatcc........................................................................................TGCTAGT.CACGA.........AAGTGG..CGTGGGT.TCGATT..CCCAC...TCTGTTCA tRNA-Leu-CAG-1-1 Sc: 63.3 >>>>>>>..>>>.............<<<.>>>.>......................................................................................................<.<<<................................................<<<<<<<. GGACAGATGGCCGAGT.GGTctA.AGGCGCTGCGTTTAGGttcgttctaaacatcctccgcagtcttcacgggcgtgggtgtaagtttactcaactcaacaactttgaatcacaggtactaatatta........ACACAGT................................CGAAT..CCCAC...TCTGTTCA tRNA-Leu-TAG-1-1 Sc: 30.8 >>>>>>>..>>>>...........<<<<.>>.>>......................................................................................................<<.<<..>>>>...........<<<<....>>>>>..........<<<<<...<<<<<<<. GACAAGTTGGCCGAGT.GGTt.A.TGGCGTGTGACTCAAGcgcaagcttctcgggttgttttcccgacgca................................................................TTCTCAT.GGGC.GTA.......GCCCG..CGGGGGT.TCGAAT..CCCCC...ACTTGTCA tRNA-Leu-CAA-1-1 Sc: 67.7 >>>>>>>..>>>.............<<<.>>>>>......................................................................................................<<<<<.........................>>>>>..........<<<<<...<<<<<<<. GGCCTCTTGGTCCAGT.GGTtaA.AGACGCTCCAGTCAAAtaaccgttgcactgggggtggatggtaggtgggagtgccacagccaccgcccgaccttgtcgggctaccagcctcctgtgtggcggttgggtaacTTGGAGAG...................A..CCGAGGT.TCAAGT..CCTTG...AGGGGCCA tRNA-Leu-CAA-2-1 Sc: 49.2 >>>>>>>..>>>.............<<<..>.>........................................................................................................<.<...........................>.>>..........<<.<....<<<<<<<. GACACGATGGCCGAGT.GGTctA.AGGCGGTAGATTTAAGctttgcttggatctctactacagtaatgtgcgtgggtatgtatcttccgcaacctcttgactatgtggaaaatatgct.................AAC.AGAG...................Gt.ATTAGGT.TCGAAC..CCCAC...TCGTGTCA tRNA-Leu-TAA-1-1 Sc: 32.4
Lys tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.....................................................................................................<<<<<.......................>.......<.......<<<<<<<. GCCCGGCTAGCTCAATCGGT.A.GAGCGTGAGACTCTTAgtcctcacgtcctaataagacacgattactcagttcatctcaaggttgtggggtatgtatctgctccactttaatcgagaataacatactaacaATCTCAAT.............A.......GTTCGACCCCCA.C..GTCGGGCT tRNA-Lys-CTT-5-1 Sc: 39.8 >>>>>>>..>>>>..........<<<<.>.>>.......................................................................................................<<.<....................>..>.......<..<....<<<<<<<. GCCCGGCTAGCTCAATCGGT.A.GAGCGTGAGACTCTTAgcactcacgtcctaacagacacgattactcagtacatctcaaggttgtggggtatgtatctactctaaatatccagaggataatt.........TACTAACT.............GtCcATTAGTTCGACCCCCAc...GTCGGGCT tRNA-Lys-CTT-3-1 Sc: 38.8 >>>>>>>..>>>>..........<<<<.>>..>.....................................................................................................<..<<....................>..>.......<..<....<<<<<<<. GCCCGGCTAGCTCAATCGGT.A.GAGCGTGAGACTCTTAgtccttcacgtcctgaaacaacgcgattggtgtacatctcaaggttgtggggtatgtacatcctcttaacagcgaaacgaaaatgta.......CTAACAGT.............AtC.ATTAGTTCGACCCCCA.C..GTCGGGCT tRNA-Lys-CTT-1-1 Sc: 38.3 GCCCGGCTAGCTCAATCGGT.A.GAGCGTGAGACTCTTAgcactcacgtcctaacagacacgattactcagtacatctcaaggttgtggggtatgtatatcctcttaacagcgaaacgaaaatgta.......CTAACAGT.............AtC.ATTAGTTCGACCCCCA.C..GTCGGGCT tRNA-Lys-CTT-2-1 Sc: 38.3 >>>>>>>..>>>>..........<<<<.>>..>.....................................................................................................<..<<.......................>.......<.......<<<<<<<. GCCCGGCTAGCTCAATCGGT.A.GAGCGTGAGACTCTTAgtcatcacgtcctaacagactcgattattcagtacatctcaaggttgtggggtatgtatatcctcctaataactaaaggaaaacata.......TTAACAAT.............GtC.ACTAGTTCGACCCCCA.C..GTCGGGCT tRNA-Lys-CTT-4-1 Sc: 38.2 >>>>>>>..>>.>..........<.<<.>>>>>.....................................................................................................<<<<<...................>>>>>.......<<<<.<..<<<<<<<. ACCCGGTTGGCACAATTGGCtA.GCGCGTGAGACTTTTA..............................................................................................ATCTCAAG.............GtT.GAGGGTTCGAGCCCCT.C..ATCGGGTG tRNA-Lys-TTT-1-1 Sc: 71.2 >>>>>>>..>>>>..........<<<<..>>>>.....................................................................................................<<<<....................>>>>>.......<<<<.<..<<<<<<<. GAGATCTTAGCTTAAT.GGT.A.AAGCGTATGACTTTTA..............................................................................................ATCATTC.TC...........A.T.AAGGGTTCAAGTCCCT.T..AGATCTTA tRNA-Lys-TTT-2-1 Sc: 46.2
Met tRNAs
>>>>>>>..>>>............<<<.>>>>.........................................................<<<<................>>>>>.......<<<<<<<<<<<<. GTCTCGTTGGTGTAGTTGGTtA.TCACGTGGGTCTCATAtcttcatatatgactgctcccagtagcagaa.................ATCCCAAG...........GcCGCCAGTTCGAGTCTGGCACGGGACA tRNA-Met-CAT-1-1 Sc: 70.3 GTCTCGTTGGTGTAGTTGGTtA.TCACGTGGGTCTCATAtcttcacatatgactactagtattagtagac.................ATCCCAAG...........GcCGCCAGTTCGAGTCTGGCACGGGACA tRNA-Met-CAT-1-3 Sc: 70.3 >>>>>>>..>>>>..........<<<<.>>>>>.......................................................<<<<<................>>>>>.......<<<<<<<<<<<<. AGCTGCTTGGCGCAGC.GGA.A.GCGCGCCGGGCTCATA................................................ACCCGGAG...........GaCCTCGGATCGAAACCGAGAGCAGCTA tRNA-iMet-CAT-2-1 Sc: 69.8 AGCTGCTTGGCGCAGC.GGA.A.GCGCGCCGGGCTCATA................................................ACCCGGAG...........GaCCTCGGATCGAAACCGAGAGCAGCTA tRNA-iMet-CAT-2-2 Sc: 69.8 >>>>>>>..>>>............<<<.>>>>.........................................................<<<<................>>>>>.......<<<<<<<<<<<<. GTCTCGTTGGTGTAGTTGGTtA.TCACGTGGGTCTCATAttgtgtgttttaacatgtctataatatgactaccagttcctggtggatATCCCAAG...........GcCGCCAGTTCGAGTCTGGCACGGGACA tRNA-Met-CAT-1-2 Sc: 69.7 >>>>>>>..>>>>..........<<<<.>>>>>.......................................................<<<<<................>>>>>.......<<<<<<<<<<<<. AGCTGAATGGCGCAGC.GGA.A.GCGCGCCGGGCTCATA................................................ACCCGGAG...........GaCGCACGATCGAAACGTGCTTCAGCTA tRNA-iMet-CAT-1-1 Sc: 64.9 >>>.>>>..>>>>..........<<<<.>>>>>.......................................................<<<<<................>>>>>.......<<<<<<<<.<<<. GCCCGAGTAGTTCAAT.GGT.A.GAACATTAATTTCATG................................................CATTAATA...........G.TGAGAATTCGACTTTCTCCTCTGGCT tRNA-Met-CAT-2-1 Sc: 39.0 >>>>>>>..>>>>..........<<<<.>>>>>.......................................................<<<<<................>>>>>.......<<<<<<<<<<<<. AAGGCTATAGCTTAATAGGT.A.AAGCAAGCTGCTCATA................................................ACAGCTCA...........GaTGAGTGTTCAAGTCATTCTGGCCTTA tRNA-Met-CAT-3-1 Sc: 31.9
Phe tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.....................<<<<<................>>>>>.......<<<<<<<<<<<<. GTCTCCTTAGCTCAATTGGGAGAGCGCCAGACTGAAGtctcagtcactaa.ATCTGGAG...........GtATCGTGTTCGATCCACGAAGGGGACA tRNA-Phe-GAA-1-1 Sc: 61.6 GTCTCCTTAGCTCAATTGGGAGAGCGCCAGACTGAAGtcttcggtcattaaATCTGGAG...........GtATCGTGTTCGATCCACGAAGGGGACA tRNA-Phe-GAA-1-2 Sc: 61.6 >>>>>>>..>>>>........<<<<.>>>>.......................<<<<................>>>>>.......<<<<<<<<<<<<. GCCCAGGTAGCTCAATTGGTAGAGCGAAACTTTGAAG..............GTGTTTAG...........GtTATAAGTTCAAATCTTATCTTGGGCA tRNA-Phe-GAA-2-1 Sc: 61.0 GCCCAGGTAGCTCAATTGGTAGAGCGAAACTTTGAAG..............GTGTTTAG...........GtTATAAGTTCAAATCTTATCTTGGGCA tRNA-Phe-GAA-2-2 Sc: 61.0
Pro tRNAs
>>>>>>>..>>>..........<<<.>>>>>..................................................................................<<<<<................>>>>>........<<<<<.<<<<<<<. GGTCTTATGGTCTAGTGGTA.TGATTCTCGCTTAGGGtgaacacctgagcacact.........................................................TGCGAGAG...........GcCCCGCGTTCGAGT.CGCGG.TAAGACCC tRNA-Pro-AGG-1-1 Sc: 60.2 GGTCTTATGGTCTAGTGGTA.TGATTCTCGCTTAGGGtgaacacctgagcacact.........................................................TGCGAGAG...........GcCCCGCGTTCGAGT.CGCGG.TAAGACCC tRNA-Pro-AGG-1-2 Sc: 60.2 GGTCTTATGGTCTAGTGGTA.TGATTCTCGCTTAGGGtggacaacctgagcacact........................................................TGCGAGAG...........GcCCCGCGTTCGAGT.CGCGG.TAAGACCC tRNA-Pro-AGG-1-3 Sc: 60.2 >>>>>>>..>>>..........<<<..>>>....................................................................................<<<.................>.>............<.<.<<<<<<<. GGCCTGATGGTCTAGTGGTA.TGATTCCTGCTTTGGGttgtcataatctattctgcaggaggccccgggtgtaagttcacccaataagtttcgatctcgtacacaatttctaATCAG.C............GtACAG...TCGAAT.CCCGG.TCAGGCCC tRNA-Pro-TGG-1-1 Sc: 37.0
SeC tRNAs
Ser tRNAs
>........>>.>...............<.<<.>>>>>............................................................................................................................................................<<<<<..>>>>.........<<<<...>>>>>.......<<<<<.........<. CTC......GCAGA......GTGGTtA.TCGCGCAAGACTAGAA.....................................................................................................................................................ATCTTGT.TCCTTC.......GGGAG.CGTCAGTTCGAATCTGGC...CAAC..GT tRNA-Ser-AGA-1-1 Sc: 25.2 >........>>...................<<.>>>>>............................................................................................................................................................<<<<<..>>>>.........<<<<...>>>>>.......<<<<<.........<. G.......GGCACAcaaagaGTGGTtA.TCGCGCAAGACTAGAA.....................................................................................................................................................ATCTTGT.TCCTTC.......GGGAG.CGTCAGTTCGAATCTGGC...CAA...CG tRNA-Ser-AGA-2-1 Sc: 21.7 >>>>>>>..>>>.................<<<.>>>>>............................................................................................................................................................<<<<<..>>>>.........<<<<...>>>>>.......<<<<<...<<<<<<<. GGTGCGGTGCCAGA......GTGGTtA.ATGGGTATGACTCGAAtatgcacgat...........................................................................................................................................ATCATAT.GTCTTC.......GGACG.CAGGAGTTCGAATCTCCT...CCGCATCG tRNA-Ser-CGA-1-1 Sc: 61.9 >>>>>>>..>>>.................<<<.>>>>>............................................................................................................................................................<<<<<..>>>...........<<<...>>>>>.......<<<<<...<<<<<<<. GACATTGTGCCAGA......GTGGTtA.ATGGGTTAGACTTGAAttactcattcatgtc......................................................................................................................................ATCTAATGGCTT.........CGGCCtCGCAAGTTCGAATCTTGT...CAATGTCG tRNA-Ser-TGA-1-1 Sc: 56.3 .>.>>>>...>.>...............<.<..>>>>>............................................................................................................................................................<<<<<..>>>>.........<<<<...>>>>>.......<<<<<...<<<<.<.. AAGGTTGTA.CAGA......GCGGTtA.TCGCGCAAGACTTGAA.....................................................................................................................................................ATCTTGT.TCCCTT.......GGGAG.CGTCAGTTCGAATCTGGC...CAACGTCG tRNA-Ser-TGA-2-1 Sc: 28.9 >>>>>>>..>>>>...............<<<<.>>>>>............................................................................................................................................................<<<<<......................>>>>>.......<<<<<...<<<<<<<. GGGCCTGTGGTCTA......GTGGT.A.AGACGCCCGCACACTGttcccacctcccacactatctcaggcttttagcgttggaagaccatgctcaggaagacgtttaggctttcagtgttagaggaccctaccagaagacgtttaggctttcagtgttggaggacctcaccagaagacagggggtggaaatgaAGCGGGAG.................A.CGCAAGGTAGATTCTTGC...CGGGCCTA tRNA-Ser-ACT-1-1 Sc: 30.8 >>>>>>>..>>>.................<<<.>>>>>............................................................................................................................................................<<<<<..>>>>.........<<<<...>>>>>.......<<<<<...<<<<<<<. GGCACTTTGGCGGA......GTGGTtA.ACGCGCTGGCCTGCTAgtcctgtatgggaaagtt...................................................................................................................................AGCCAGT.TCCTTC.......GGGAG.CGTGTGTTCGAATCACAC...AGGTGTCG tRNA-Ser-GCT-1-1 Sc: 63.3
Sup tRNAs
Thr tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......................<<<<<................>>>>>.......<<<<<<<<<<<<. GCCTTCGTAGCTCAGTGGTA.GAGCGCGTCACTAGTA................ATGACGAG...........GtCGTCAGTTCAATTCTGGCCGAAGGCA tRNA-Thr-AGT-1-1 Sc: 83.4 GCCTTCCTAGCTCAGTGGTA.GAGCGCGTCACTAGTA................ATGACGAG...........GtCGTCAGTTCAATTCTGGCGGAAGGCA tRNA-Thr-AGT-2-1 Sc: 81.4 GCCTTCCTAGCTCAGTGGTA.GAGCGCGTCACTAGTA................ATGACGAG...........GtCGTCAGTTCAATTCTGGCGGAAGGCA tRNA-Thr-AGT-2-2 Sc: 81.4 GCCTTCCTAGCTCAGTGGTA.GAGCGCGTCACTAGTA................ATGACGAG...........GtCGTCAGTTCAATTCTGGCGGAAGGCA tRNA-Thr-AGT-2-3 Sc: 81.4 >>>>>>>..>>>..........<<<.>>>>>.......................<<<<<................>>>>>.......<<<<<<<<<<<<. GCCCACTTAGCACAGTGGTA.CTGCGTCGCACTCGTAacgcactttgctcgatATGCGAAG...........AtCCACGGTTCGATTCCGTGAGTGGGCA tRNA-Thr-CGT-1-1 Sc: 65.1 >>>>>>>..>>>>........<<<<.>>>>>.......................<<<<<................>>>>>.......<<<<<<<<<<<<. GCAGGATTGGCCTAGTGGTA.AGGCGTCGCACTCGTAgctgctccgat.....ATGCGAAG...........AtCTCCAGTTCGATCCTGGAATTCTGCA tRNA-Thr-CGT-2-1 Sc: 62.8 >>>>>>>..>>>>........<<<<.>>>>>.......................<<<<<................>>>>>.......<<<<<<<<<<<<. GCTCCTTTGGCTTAGCGGTA.AAGCGTCGCACTTGTA................ATGCGAAG...........AtCACTCGTTCGATTCGGGTAAGGAGCA tRNA-Thr-TGT-1-1 Sc: 71.4 >>>>>>>..>>>..........<<<.>>>>>.......................<<<<<................>>>>>.......<<<<<<<<<<<<. GCTAATTTGGCCAAGTGGTA.AGGCGTCGCACTTGTAtccaaggagca.....ATGCGAAG...........AgCACTCGTTCGATTCGGGTAATTAGCA tRNA-Thr-TGT-2-1 Sc: 61.8 >>>>>>>..>>>>........<<<<..>>>.........................<<<.................>>>>>.......<<<<<<<<<<<<. GCCTGGTTTGCATAATAGTA.ATGCACCCGTTTTGTA................ATCGGAAG...........A.TATGAGTGCAATTCTCGTACTGGGCT tRNA-Thr-TGT-3-1 Sc: 29.0
Trp tRNAs
>>>>>>>..>>>>........<<<<.>>>>>........................<<<<<..>.>>........<<.<...>>>>>.......<<<<<<<<<<<<. GGCTTCGTGGCGCAATGGTA.GCGCGTCAGATTCCAGttt..............CTCTGGAGCATCC......TGAAGGtTAGGCGTTCAAATCGCCTCGAGGTCA tRNA-Trp-CCA-1-1 Sc: 58.8 >>>>>>>..>>>>........<<<<.>>>>..........................<<<<.....................>>>>>.......<<<<<<<<<<<<. GGCTTCGTGGCGCAATGGTA.GCGCGTCAGATTCCAGtacccaccactggagctTCCTGAAG................GtTAGGCGTTCAAATCGCCTCGAGGTCA tRNA-Trp-CCA-2-1 Sc: 56.9
Tyr tRNAs
>>>>>>>..>>>............<<<.>>>>>.........................................................................<<<<<................>>>>>.......<<<<<<<<<<<<. CTCCGCTTGGTGTAGTTGGTttATCACGTTCGACTGTAAtagcaattgtt.......................................................ATCGAAAG...........GtCCCTAGTTCGATTCTGGGAGCGGAGA tRNA-Tyr-GTA-1-1 Sc: 71.7 CTCCGCTTGGTGTAGTTGGTttATCACGTTCGACTGTAAtagcaattgtt.......................................................ATCGAAAG...........GtCCCTAGTTCGATTCTGGGAGCGGAGA tRNA-Tyr-GTA-1-2 Sc: 71.7 >>>>>>>...>>>..........<<<..>>>.>.........................................................................<.<<<................>>>>>.......<<<<<<<<<<<<. CTCCGCTTGGTGTAGTTGGT...GTAAGTTCTAACGTCAaccctattctcactcagcctctaacatcttctctagttatcacgttcgactgtaatagcaattgttATCGAAAG...........GtCCCTAGTTCGATTCTGGGAGCGGAGA tRNA-Tyr-GTA-2-1 Sc: 37.9
Val tRNAs
>>>>>>>..>>>............<<<.>>>>>....................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGCTCGGTGGTGTAGTTGGTtA.TCACGTCAGTCTAACAacctgtttagatg................CACTGAAG...........GtCCCGAGTTCAATCCTCGGCTGAGTCA tRNA-Val-AAC-1-1 Sc: 72.2 GGCTCGGTGGTGTAGTTGGTtA.TCACGTCAGTCTAACAtcgcagttaggca................CACTGAAG...........GtCCCGAGTTCAAGCCTCGGCTGAGTCA tRNA-Val-AAC-2-1 Sc: 71.6 GGCTCGGTGGTGTAGTTGGTtA.TCACGTCAGTCTAACAtcgcagttaggca................CACTGAAG...........GtCCCGAGTTCAAGCCTCGGCTGAGTCA tRNA-Val-AAC-2-2 Sc: 71.6 GGCTCGTTGGTGTAGTTGGTtA.TCACGTCAGTCTAACAtaacatcctcacggatgcttgcgtttgtaCACTGAAG...........GtCCGGAGTTCAAACCTCCGATGAGTCA tRNA-Val-AAC-3-1 Sc: 67.9 >>>>>>>..>>>............<<<.>>>>>....................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGCTCGATGGTGTAGTTGGTtA.TCACGTTCGCCTCACAcaactgtgaagta................CGCGAAAG...........GtCGCGAGTTCGAGCCTCGCTTGAGTCA tRNA-Val-CAC-1-1 Sc: 74.8 >>>>>>>..>>>............<<<.>>>>>....................................<<<<<................>>>>>.......<<<<<<<<<<<<. GCGAGCGTAGTCTAGT.GGTtA.TGATGTCTGCTTTACAttatacaatgtatagccccccaaa.....CGCAGAAG...........GtCGGGAGTTCGACCCTCCCCGCTCGTA tRNA-Val-TAC-1-1 Sc: 60.9 >>>>>>>..>>>>..........<<<<..>>>>....................................<<<<.................>>>>>.......<<<<<<<<<<<<. AAGAAATTAGCTCAATTGGT.A.GAGCATCCGTTTTACA.............................CGCGGCAG...........GtTAAGTGTTCGAATCACTTATTTCTTA tRNA-Val-TAC-2-1 Sc: 46.2