Structurally Aligned tRNAs (by Isotype & Anticodon)

Structural alignments are generated by aligning tRNA sequences against domain-specific tRNA covariance models with the use of COVE.

Ala tRNAs
>>>>>.>..>>>>.........<<<<.>>>>>.........................<<<<<................>>>>>.......<<<<<<.<<<<<. GGGGGTCTAGCTCAGATGGTA.GAGCGCTCGCTTAGCA..................TGCGAGAG...........GtACTGAGATCGATACTCAGGTCCTCCA tRNA-Ala-AGC-1-3 Sc: 58.2 GGGGGTCTAGCTCAGATGGTA.GAGCGCTCGCTTAGCAagcctgtcggcctgttg.TGCGAGAG...........GtACTGAGATCGATACTCAGGTCCTCCA tRNA-Ala-AGC-1-1 Sc: 50.7 GGGGGTCTAGCTCAGATGGTA.GAGCGCTCGCTTAGCAagcctatcgggcctgttgTGCGAGAG...........GtACTGAGATCGATACTCAGGTCCTCCA tRNA-Ala-AGC-1-2 Sc: 50.6 >>>>>.>..>>>>.........<<<<.>>>>>.........................<<<<<................>>>>>.......<<<<<<.<<<<<. GGGGGTCTAGCTCATATGGTA.GAGCGCTCGCTTCGCAtcgccgcgtgaa......TGCGAGAG...........GcACTGGGATCGATACCCAGGTCCTCCA tRNA-Ala-CGC-1-1 Sc: 48.9 >>>>>.>..>>>>.........<<<<.>>>>>.........................<<<<<................>>>>>.......<<<<<<.<<<<<. GGGGATGTAGCTCAGT.GGTA.GAGCGCTCGCTTTGCA..................TGCGAGAG...........GtCCTGGGTTCGATCCCCAGCTTCTCCA tRNA-Ala-TGC-1-1 Sc: 82.9
Arg tRNAs
>>>>>>>..>>>............<<<.>>.>>>...............................<<<<<..................>>>>>........<<<<<...<<<<<<...<. GGGCTCATGGCCAAAT.GGAtA.AGGCGCC.TGACTACGA........................ATCAGGAG.............AtTCCAGGTTCGACC.CCTGG...TGAGCT...CG tRNA-Arg-ACG-1-1 Sc: 68.2 GGGCTCATGGCCAAAT.GGAtA.AGGCGCC.TGACTACGA........................ATCAGGAG.............AtTCCAGGTTCGACC.CCTGG...TGAGCT...CG tRNA-Arg-ACG-1-2 Sc: 68.2 >>>>>>>..>>>............<<<.>>.>>>...............................<<<<<.......................................<<<<<<...<. GGGCTCATGGCCAAAT.GGAtA.AGGCGCC.TGACTACGA........................ATCAGGT.......................TCGACC.CCTGG...TGAGCT...CG tRNA-Arg-ACG-2-1 Sc: 26.7 >>>>>>>..>>>>..........<<<<.>>.>>>...............................<<<<<..................>>>>>........<<<<<...<<<<<<...<. GGCCGTGTAGATCAGT.GGAtA.GATCGTC.TGCCTCCGGttgtatttgggtt...........AGCAGAAG.............GtCGTAGGTTCAAAC.CCTAC...CACGGT...CG tRNA-Arg-CCG-1-1 Sc: 68.5 >>>>>>>..>>>>..........<<<<..>.>>>...............................<<<<...................>>>>>........<<<<<...<<<<<<...<. GCATCTTTAGCTCAATCGGAtA.GAGCGTC.GGTCTTCGA........................AACCGTAG.............GtTATTGGTTCGACT.CCAAT...AAGGTG...CT mt-tRNA-Arg-TCG-2-1 Sc: 62.3 >>>>>>>..>>>>..........<<<<.>>.>>>...............................<<<<<..................>>>>>........<<<<<...<<<<<<...<. GGGGCGTTGGCCTAAT.GGAtA.AGGCATC.AGACTTCGG........................ATCTGGGG.............AtTGTGGGTTCGAGT.CCCAT...GCGCCT...CG tRNA-Arg-TCG-1-1 Sc: 56.2 >>>>>>>..>>>............<<<.>>.>>>...............................<<<<<..................>>>>>........<<<<<...<<<<<<...<. GCCCCAATAGCCTAAT.GGAtA.TGGCGTC.GCCCTCCTA........................AGGCGGAG.............GtTCTAGGTTCGAGT.CCTAG...TTGGGG...CG tRNA-Arg-CCT-1-1 Sc: 75.2 >>>>>>>..>>>>..........<<<<.>>.>>>...............................<<<<<..................>>>>>........<<<<<...<<<<<<...<. GCCCGGCTGGCGTAATCGGAtA.ACGCACC.AGACTTCTAatgaatgtaaaattcagttgggt.ATCTGGGG.............AtTGCGGGTTCGAGT.CCCGC...GTCGGG...TA tRNA-Arg-TCT-1-1 Sc: 62.7 GGCCGCTTAGCTTAATTGGA.A.GAGCATA.ATACTTCTA........................ATATTAT.TT...........A.TTCAGGTTCGATC.CCTGA...AGTGGT...CA mt-tRNA-Arg-TCT-3-1 Sc: 52.9 >.>>>>>..>>>............<<<.>>.>>>...............................<<<<<..................>>>>>........<<<<<...<<<<<....<. GCCCGACTGGCGCAATTGGAtA.ACGCGCCaAGACCTCTAatgaatgttgagaattcagttgatATCTGGTG.............AtTGTGGGTTCGAGT.CCCAC...GTCGGTataCA tRNA-Arg-TCT-2-1 Sc: 43.4
Asn tRNAs
>>>>>>>..>>>>..........<<<<.>>>>..................................<<<<................>>>>>.......<<<<<<<<<<<<. GCCCAGTTAGTTTAATTGGTtA.GAACGCCACAcCTATTGttctgaattacagaatatcaaaacC.GTGGAA...........A.TGCGGGTTCAATTCCTGCACTGGGCT tRNA-Asn-ATT-1-1 Sc: 44.2 ..>>>.>..>>>>..........<<<<.>.>>>................................<<<.<................>>>>>.......<<<<<<.<<<... ACCCAATTAGTTCAATTGGT.A.GAACACTGAG.TAATTGtagtttttttt.............ACTCTGAA...........A.TGCAGGTTTGATTCCTGCACTGGAAA tRNA-Asn-ATT-2-1 Sc: 20.5 >>>>>>>..>>>>..........<<<<.>>>>>................................<<<<<................>>>>>.......<<<<<<<<<<<<. GCCTCCATGGCGCAACCGGCtA.GCGCGTTCGG.CTGTTA........................ACCGAAAG...........GaTCCTGGTTCGAATCCAGGTGGGGGCG tRNA-Asn-GTT-2-1 Sc: 79.0 >>>>.>>..>>>>..........<<<<.>>>>>................................<<<<<................>>>>>.......<<<<<<<.<<<<. GCCACTGTAGCTCAGC.GGT.A.GAGCAAATCA.CTGTTA........................ATGATTTT...........GtCCTGGGTTCGATCCCCAGCAATGGCT mt-tRNA-Asn-GTT-3-1 Sc: 70.2 >>>>>>>..>>>>..........<<<<.>>>>>................................<<<<<................>>>>>.......<<<<<<<<<<<<. GCCTCCATGGCGCAACCGGCtA.GCGCGTTCGG.CTGTTAtcctactgac..............ACCGAAAG...........GtTCCTAGTTCGAATCTAGGTGGGGGCG tRNA-Asn-GTT-1-1 Sc: 68.4
Asp tRNAs
>>>>>>>..>>>>..........<<<<..>>.>>>................................<<<<<...................>>>>>.......<<<<<<<<<<<<. TCTCGGTTAGTATAGT.GGTtA.GTATC.CC.CGCCTGTCAgggtatccagca.............CGCGGGAG..............A.CCGGGGTTCAATTCCCCGACCGAGAG tRNA-Asp-GTC-1-1 Sc: 57.4 >>>>>>>..>>.>..........<.<<..>>.>>>................................<<<<<...................>>>>>.......<<<<<<<<<<<<. GGGTTTGTGGTCTAACTGGA.A.AAACAaTT.AACTTGTCA.........................CGTTGAAA..............GaTGTCGGTTCGAGTCCGACCAAGCCCG mt-tRNA-Asp-GTC-3-1 Sc: 36.4 >>>>>>>..>>>>..........<<<<...>..>>................................<<.<...>............<...>>>>>.......<<<<<<<<<<<<. GGGGTGGTAGCTTAAT.GGT.A.AAGCA.ATcTGATTGTCActcagaatggacctaggaggtgaaaCTCTAGAGGTC........CTCA.TCCGGGTTCGAGTCCTGGTCATCCCG mt-tRNA-Asp-GTC-2-1 Sc: 35.9
Cys tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<. GGGGATTTAGCTCAGTGGTA.GAGCAATCGACTGCAGATCGATAG...........GtCACTGGTTCAAATCCGGTAGTCCCCT tRNA-Cys-GCA-1-1 Sc: 77.0
Gln tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<. GGTTTCGTGGTGTAATGGTtA.GCACCCAGGACTTTGAATCCTGTA...........ATCCGAGTTCGATTCTCGGCGAGACCT tRNA-Gln-TTG-1-1 Sc: 64.9
Glu tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<. TCCGCATTGGTCTAGTGGTtA.GGATCTCCCGCTCTCACCGGGAAG...........GCCGGGGTTCGATTCCCCGATGCGGAA tRNA-Glu-CTC-1-1 Sc: 70.5 TCCGCATTGGTCTAGTGGTtA.GGATATCCCGTTCTCATCGGGAAG...........GCCGGGGTTCGATTCCCCGATGTGGAT tRNA-Glu-CTC-2-1 Sc: 68.3 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<. TCCGCATTGGTCCAGTGGTtA.GGATTTCGCGCTTTCACCGCGACG...........GCCGGGGTTCGATTCCCCGATGCGGAA tRNA-Glu-TTC-1-1 Sc: 74.5 TCCGCATTGGTCCAGTGGTtA.GGATTTCGCGCTTTCACCGCGACG...........GCCGGGGTTCGATTCCCCGATGCGGAA tRNA-Glu-TTC-1-2 Sc: 74.5 TCCGCATTGGTCCAGTGGTtA.GGATTTCATGCTTTCACCATGACG...........GCCGGGGTTCGATTCCCCGATGCGGAA tRNA-Glu-TTC-2-1 Sc: 69.0
Gly tRNAs
>>>>>>>..>>>>..........<<<<.>>>>.........................<<<<................>>>>>.......<<<<<.<<<<<<<. GCCCGGTTAGTTCAGTTGGTtA.GAACGCCACACCTATTtacgctaccaatgtaaACGTGGAA...........A.CGCGGGTTAAATTCCTGC.ACTGGGCA tRNA-Gly-ACC-1-1 Sc: 47.4 >>>>>>>..>>>............<<<.>>>>>.......................<<<<<................>>>>>.......<<<<<.<<<<<<<. GCATGCTTGGTTTAGT.GGT.A.TAATTCGCGCCTGCCA................CGCGCGAG...........A.CCCGAGTTCGATTCTCGG.AGCATGCA tRNA-Gly-GCC-2-1 Sc: 74.3 GCATGCTTGGTTTAGT.GGT.A.TAATTCGCGCCTGCCA................CGCGCGAG...........A.CCCGAGTTCGATTCTCGG.AGCATGCA tRNA-Gly-GCC-2-2 Sc: 74.3 GCATGCTTGGTTTAGT.GGT.A.TAATTCACGCCTGCCA................CGCGTGAG...........A.CCCGAGTTCGATTCTCGG.AGCATGCA tRNA-Gly-GCC-1-1 Sc: 73.4 >>>>>>>..>>.>..........<.<<.>>>>>.......................<<<<<................>>>>>.......<<<<<.<<<<<<<. GCATCAGTAGTATAGC.GGT.A.GAATACTCGCCTTCCAagatacttgagaa...AGCGAGTG...........G.CCCGGGTTCAACTCCCGG.CTGATGCA tRNA-Gly-TCC-1-1 Sc: 58.9 >>>>>>>..>>>>..........<<<<.>>>>>.......................<<<<<................>>>>>.......<<<<<.<<<<<<<. GCGAGCATAGGTTAGT.GGT.A.AACCGTATCCCTTCCA................AGGATGA............TtCGCGTGTTCGAGTCACGC.TGCTCGCA mt-tRNA-Gly-TCC-2-1 Sc: 58.1
His tRNAs
>>>>.>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<.<<<<. GTGATTATAGTTCAATTGGTaA.GAACGTCAATTTGTGGTATTGAAG...........CgTCTGGGTTCGAGTCCCAGTATTCACC mt-tRNA-His-GTG-2-1 Sc: 52.1 >>>>>>>..>>>>..........<<<<..>>>>.......<<<<.................>>>>>.......<<<<<<<<<<<<. GCCGTTGTCGTATAGT.GGC.A.GTACATCGCGTTGTGGCCGCGCTA...........G.CCCTGGTTCGATTCCAGGCAACGGCA tRNA-His-GTG-1-1 Sc: 48.7
Ile tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>...........................................<<<<<................>>>>>.......<<<<<.........<<<<<<<. GCTCCTTTAGCTCAGTTGGTtA.GAGCGTCGTG..CTAATAgaacccagtgggttttc................A.CGCGAAG...........GtCATAAGTTCGATCCTTAT.........AAGGAGCA tRNA-Ile-AAT-1-1 Sc: 75.1 GCCCTATTAGCTCAGTTGGTtA.GAGCGTCGTG..CTAATAggatctgaatatcagattcagtt..........A.CGCGAAG...........GtCATAAGTTCGAGCCTTAT.........ATGGGGCA tRNA-Ile-AAT-2-1 Sc: 72.6 >>>>>>>..>>>>..........<<<<.>>>>>...........................................<<<<<................>>>>>.......<<<<<.........<<<<<<<. AGGGTTCTAGCTCAATTGGTtA.GAGTGTAGTG..TTGATA.................................A.CGCTAAG...........GtTATGGGTTCGAATCCCAT.........GGATCCTA mt-tRNA-Ile-GAT-1-1 Sc: 64.7 >.>......>>>>..........<<<<.>>>>>...........................................<<<<<................>>>>>.......<<<<<.............<.<. GCT....TAGCTCAATTGGTtA.GAGTGTTGTG..CTGATA.................................A.CGCAAAG...........GtTATGGGTTCGGATCCCATggatcctacCGTCAATA tRNA-Ile-GAT-2-1 Sc: 43.1 >>>>>>>..>>>............<<<.>>>>>...........................................<<<<<................>>>>>.......<<<<<.........<<<<<<<. GCTCCCGTAGCAAAGT.GGC.A.ATGCGTCGTG..CTTATAgggtagtaacctatacttgagca..........A.CGCGAAG...........GtCGCGAGTTCGATCCTCGC.........CGGGAGCA tRNA-Ile-TAT-1-1 Sc: 67.4 >>>>>>>..>>>>..........<<<<.>>>>.............................................<<<<................>>>>>.......<<<<<.........<<<<<<<. GCCCGGTTAGTTCAGTTGGTtA.GAACGCCACAacTTATTAaacgtaaattttcaaaggttgat..........C..GTGGAA...........A.CGCGGGTTCAATTCCTGC.........ACTGGGCT tRNA-Ile-TAT-2-1 Sc: 53.7 GCCCGGTTAGTTTAGTTGGTtA.GAACGCCACAacTTATTAaatataaattttcaaaggtgaat..........C..GTGGAA...........A.CGCGGGTTCAATTCCTGC.........ACTGGGCT tRNA-Ile-TAT-3-1 Sc: 51.2 >>.>>>>...>>>..........<<<..>>>>.............................................<<<<................>>>>>.......<<<<<.........<<<<.<<. GCATGGTGAATTCAGTTGGTtA.GAACGCCACA...TCTTAtaagacattacgtgataaatgtgaagtcgtaacC..GTGGAA...........A.CGCGGGTTCAATTCCTGC.........ACTGGGCC tRNA-Ile-TAT-4-1 Sc: 20.0
Leu tRNAs
>>>>>>>..>>>..............<<<.>>>>>...................................<<<<<..>>>>...........<<<<..>>>>>.......<<<<<.<<<<<<<. GGTGACATGGCCGAGT.GGTctA..AGGCGCTGCGTTCAGG............................TCGCAGT.CTCA.GCAA......TGGGGCGTGAGTTCGAATCTCAC.TGTCACCA tRNA-Leu-CAG-1-1 Sc: 69.9 >>>>>>>..>>>..............<<<.>>>>>...................................<<<<<..>>>.............<<<..>>>>>.......<<<<<.<<<<<<<. GGCGACGTGCCCGAGT.GGTccA..AGGGGCCAGGTTTAGG............................CCCTGGT.ATGGA.........AACATGCGTGGGTTCAAACCCCAC.CGTCGTCA tRNA-Leu-TAG-1-1 Sc: 70.7 ACGGCTATGTTGGAATTGGC..Ag.ACAAGTGTGACTTAGG............................ATCACGTGGGT..AAT........ACCGTGAGGGTTCAAATCCCTC.TAGCCGTA mt-tRNA-Leu-TAG-2-1 Sc: 50.2 ACGGCTATGTTGGAATTGGC..Ag.ACAAGTGTGACTTAGG............................ATCACGTGGGT..AAT........ACCGTGAGGGTTCAAATCCCTC.TAGCCGTA mt-tRNA-Leu-TAG-2-2 Sc: 50.2 >>>>>>>..>>>..............<<<.>>>>>...................................<<<<<..>>>.............<<<..>>>>>.......<<<<<.<<<<<<<. GGTGACTTGGCCGAGC.GGTctA..AGGCGCCGCAGTCAAG............................TTGCGGT.CTCG.AAA.......AGAGGCGTGAGTTCGAATCTCAC.AGTCATCA tRNA-Leu-CAA-1-1 Sc: 57.9 GGTGACTTGGCCGAGT.GGTctA..AGGCGCCGCAGTCAAG............................TTGCGGT.CTCGA.........AAGAGGCGTGAGTTCGAATCTTAC.AGTCATCA tRNA-Leu-CAA-2-1 Sc: 56.6 GATGACTTGGCCGAGC.GGTctA..AGGCGCCGCAGTCAAG............................TTGCGGT.CTCGA.........AAGAGGCGTGAGTTCGAATCTTAC.AGTCATCA tRNA-Leu-CAA-3-1 Sc: 53.9 >>>>>>>..>>>..............<<<.>>>>>...................................<<<<<..>>>>...........<<<<..>>>>>.......<<<<<.<<<<<<<. GCTGACGTGTCCGAGT.GGTccA..AGGAGCCAGACTTAAG............................ATCTGGT.ATGC.GAAA......GCATGCGTGGGTTCAAACCCCAC.CGTCAGCA tRNA-Leu-TAA-2-1 Sc: 79.5 GCTGACGTGTCCGAGT.GGTctA..AGGAGCCAGACTTAAG............................TTCTGGT.ATGT.GTAA......ACATGCGTGGGTTCGAACCCCAC.CGTCAGCA tRNA-Leu-TAA-1-1 Sc: 78.6 >>>>>>>..>>>>............<<<<.>>>>.....................................<<<<.......................>>>>>.......<<<<<.<<<<<<<. GCCCGGTTAGTTCAGTTGGTt.A..GAACGCCACAACTTAAttaaataatataagttttcaaagataaaTCGTGGAA...................ACGCGGGTTCAATTCCTGC.ACTGGGCT tRNA-Leu-TAA-4-1 Sc: 53.5 >>>>>>>..>>>..............<<<.>>>>>...................................<<<<<...>...............<...>>>>>.......<<<<<.<<<<<<<. GGTTTTGTGAGGAAACTGGT..Ag.CCCTGCTGAATTTAAA............................ATTCAGTGCTTA...........GTGCATGCGGGTTCGAATCCCGC.CAAAACCA mt-tRNA-Leu-TAA-3-1 Sc: 35.9
Lys tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>................................<<<<<..................>>>>>.......<<<<<.<<<<<<<. GCCCGGCTAGCTCAATCGGT.A.GAGCGTGAGA..CTCTTA.......................ATCTCAAG.............GtTGTGGGTTCGACCCCCAC.GTTGGGCG tRNA-Lys-CTT-1-1 Sc: 84.2 GCCCGGCTAGCTCAATCGGT.A.GAGCGTGAGA..CTCTTA.......................ATCTCAAG.............GtTGTGGGTTCGACCCCCAC.GTTGGGCG tRNA-Lys-CTT-1-2 Sc: 84.2 GCCCGGCTAGCTCAATCGGT.A.GAGCGTGAGA..CTCTTAcgagaaccatcgta.........ATCTCAAG.............GtTGGGGGTTCGATCCCCCC.GTTGGGCG tRNA-Lys-CTT-2-1 Sc: 77.9 >>>>>>>..>>>>..........<<<<.>>>>>................................<<<<<..................>>>>>.......<<<<<.<<<<<<<. GCCCGGATAGCTCAGTCGGT.A.GAGCGTGAGG..CTTTTAaccgacaatttcggtccgaa...ACCTTAAG.............GcCGTGGGTTCGAGCCCCAC.TCCGGGCG tRNA-Lys-TTT-1-1 Sc: 81.8 GCCCGGATAGCTCAGTCGGT.A.GAGCGTGAGG..CTTTTAagacatctccgtgagtcttgggaACCTTAAG.............GcCGTGGGTTCGAGCCCCAC.TCCGGGCG tRNA-Lys-TTT-1-2 Sc: 81.7 GAGTATGTAGCTCAAA.GGT.A.GAGCAGCCGC..CTTTTA.......................AGCGGTT.TT...........G.TTGGGGTTCGAACCCCCA.CATACTCA mt-tRNA-Lys-TTT-2-1 Sc: 57.3 >>>>>>>..>>>>..........<<<<.>>>>..................................<<<<..................>>>>>.......<<<<<.<<<<<<<. GCCCGGTTAGTTTAGTTGGTtA.GAACGCCACAtcTTTTCAttgtttgaat.............C.GTGGAA.............A.CGCGGGTTCAATTCCTGC.ACTGGGCC tRNA-Lys-TTT-3-1 Sc: 46.2
Met tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<.<<<<<<<. AGCAGCGTAGCGCAGA.GGA.A.GCGCGCGGGGCTCATAACCCCGAG...........GtCGGAGGATCGAAACCTCC.CGCTGCTA tRNA-iMet-CAT-2-1 Sc: 66.1 AGCAGCGTAGCGCAGA.GGA.A.GCGCGCGGGGCCCATAACCCCGAG...........GtCGGAGGATCGAAACCTTC.CGCTGCTA tRNA-iMet-CAT-1-1 Sc: 57.6 GTCGGGATAGTATAAG.GGTtA.ATACGCACGTTTCATATACGTGA............GtTAGAGGTTCGAATCCTCT.TCCCGATA mt-tRNA-Met-CAT-2-1 Sc: 53.5 >>>>>>>..>>>>..........<<<<..>>>>.......<<<<.................>>>>>.......<<<<<.<<<<<<<. GAGGCAATAGCTCAATAGGT.A.GAGCATACCGCTCATAACGGTCAG...........CtTGGTGGTTCGAATCCACC.TTGCCTCA mt-tRNA-Met-CAT-1-1 Sc: 52.0 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<.<<<<<<<. AGCAGCGTAGCGCAGA.GGA.A.GCGCGCGGGGCCCATAACTCCGAG...........GtCGGGGGATCGAAACCTTC.CGCTGCTA tRNA-iMet-CAT-3-1 Sc: 49.0 TGCAAGTTGGTGTAAG.GGT.T.GCATGTCAGACTCATGTTCTGAAG...........G.AGGCCGTTCGACTCGGCC.ACTTGCAC mt-tRNA-Met-CAT-3-1 Sc: 42.9
Phe tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>..................<<<<<................>>>>>.......<<<<<<<<<<<<. GCGAGTTTAGCTCAGTTGGGA.GAGCGTCAGACTGAAGttagattcgtaATCTGAAG...........GcCGGGTGTTCAATCCACCCAACTCGCA tRNA-Phe-GAA-1-1 Sc: 70.7 GCGAGTTTAGCTCAGTTGGGA.GAGCGTCAGACTGAAGttgattcgta.ATCTGAAG...........GcCGGGTGTTCAATCCACCCAACTCGCA tRNA-Phe-GAA-1-2 Sc: 70.7 GTCTCGAGGGCTCGAC.GGTA.GAGCATACGATTGAAG...........ATCGTAGG...........G.CGCAGGTTCAACTCCTGCTCGGGACA mt-tRNA-Phe-GAA-2-1 Sc: 59.1
Pro tRNAs
>>>>..>>>..>>>............<<<.>>>>>............................................<<<<<................>>>>>.......<<<<<........<<<<<<<. GGCT..TGGTGGTCTAGT.GGC.A.TGATTCTCGCTTAGGGttgtcctctgaat........................TGCGAGAG...........GtCCCGGGTTCAATTCCCGG........CCAAGCCC tRNA-Pro-AGG-1-1 Sc: 64.3 >>>>..>>>..>>>............<<<.>>>>>............................................<<<<<................>>>>>.......<<<<<........<<<<<<<. GGCT..CAATGGTCTAGT.AGT.A.TGATTCTCCGTTCGGG.....................................TCGGAGAG...........GtCCCGGGTTCAATTCCCGG........TTGAGCCC tRNA-Pro-CGG-1-1 Sc: 64.1 >>>>..>>>..>>>>..........<<<<.>>>>>............................................<<<<<................>>>>>.......<<<<<........<<<<<<<. TTTTccAATTAGTTCAGTTGGTtA.GAACTCCACGCGCGGAttaatatttacaatttcaacgcccttgagactagccaGCGTGGA............AcCGCGGGTTCGACCTCCGC.actgagtATTAAAAA tRNA-Pro-CGG-2-1 Sc: 20.7 >>>>..>>>..>>>............<<<.>>>>>............................................<<<<<................>>>>>.......<<<<<........<<<<<<<. GGCT..CCATGGTCTAGT.AGT.A.TGATTCTCGCTTTGGG.....................................TGCGAGAG...........GtCGTGGGTTCAATTCCCGC........TGGAGCCC tRNA-Pro-TGG-1-1 Sc: 65.3 >>>>..>>>..>>>>..........<<<<.>>>>>............................................<<<<<................>>>>>.......<<<<<........<<<<<<<. CGGA..TCGTAGTCTAAT.GGT.A.AGACGATCGGTTTGGG.....................................TCCGATAG...........AtTGTGAGTTCAAATCTTAC........CGATCCGA mt-tRNA-Pro-TGG-2-1 Sc: 55.2
SeC tRNAs
Ser tRNAs
>>>>>>>..>>>..............<<<.>>>>>.......<<<<<..>>>>............<<<<...>>>>>.......<<<<<.<<<<<<<. GACGACGTGTCCGAGT..GGTt.A.AGGAGTGTGACTAGAAATCACAT.GGGC..TCT.......GCCCG.CACAGGTTCAAGTCCTGT.CGTCGTCG tRNA-Ser-AGA-1-1 Sc: 81.3 GACGACGTGTCCGAGT..GGTt.A.AGGAGTGTGACTAGAAATCACAT.GGGC..TCT.......GCCCG.CACAGGTTCAAGTCCTGT.CGTCGTCG tRNA-Ser-AGA-1-2 Sc: 81.3 >>>>>>>..>>>..............<<<.>>>>>.......<<<<<..>>>>............<<<<...>>>>>.......<<<<<.<<<<<<<. GACAACATGGCCGAGT..GGTt.A.AGGCGTCAGACTCGAAATCTGAT.GGGC..TCT.......GCCCG.CGCAGGTTCAAATCCTGC.TGTTGTCG tRNA-Ser-CGA-1-1 Sc: 89.4 >>>>>>>..>>>..............<<<.>>>>>.......<<<<<..>>>>............<<<<...>>>>>.......<<<<<.<<<<<<<. GACAACATGGCCGAGT..GGTt.A.AGGCGTCAGACTTGAAATCTGAT.TCCC..TAT.......GGGAG.CGCAGGTTCAAACCCTGC.TGTTGTCG tRNA-Ser-TGA-2-1 Sc: 81.8 GACGGCATGGCCGAGC..GGTt.A.AGGCGTTAGACTTGAAATCTAAT.TCCC..TTTG......GGGAG.CGTAGGTTCAAATCCTGC.TGCCGTCG tRNA-Ser-TGA-1-1 Sc: 81.5 >>>>>>>..>>>..............<<<..>>>>.......<<<<...>>>>............<<<<...>>>>>.......<<<<<.<<<<<<<. GGACGGGTGGCTGAGTCtGGTtaA.AGGCGCCCCACTTGAAATGGGCTAATGCT.TAT......CGCATT.CCAGGGTTCAAATCCCTG.TCCGTCCG mt-tRNA-Ser-TGA-3-1 Sc: 49.3 >>>>>>>..>>>..............<<<.>>>>>.......<<<<<..>>>>............<<<<...>>>>>.......<<<<<.<<<<<<<. GTCGCTTTGGCGGAGT..GGTt.A.ACGCGGTGGCCTGCTAAGCCATT.TCCC..TCT.......GGGAG.CGCAGGTTCGAATCCTGC.AGGCGACG tRNA-Ser-GCT-1-1 Sc: 81.8 >>>>>>>..>>>..............<<<.>>>>>.......<<<<<..>>>>>..........<<<<<...>>>>>.......<<<<<.<<<<<<<. GGAAAAGAGGCCGAATG.GGTt.A.AGGCGATAACCTGCTAAGTTATGGGACTAA........ATAGTCCtTGAGGGTTCAACTCCCTC.CTTTTCCG mt-tRNA-Ser-GCT-2-1 Sc: 41.7
Sup tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>................................................<<<<<...............>>>>>.......<<<<<<<<<<<<. GTCCTGAAGGCTCAACGGT.A.GAGCATACGATTTAG...........................................TCGTAAG...........ATGCAGGTTCGACTCCTGCTCAGGATA tRNA-Sup-TTA-1-1 Sc: 49.6 >>>>>>>..>>>>.........<<<<.>>>>..................................................<<<<...............>>>>>.......<<<<<<<<<<<<. GCCCGGTTAGTTCAGTCGTtA.GAATATCACA.TATTAatattaaataaaataaaaaatattaaatattaagt..C.....GTGAAG...........ACGCGGGTTCAACTCCTGCACTGGGCT tRNA-Sup-TTA-2-1 Sc: 36.4 GCCCGGTTAGTTCAGTCGTtA.GAATATCACA.TATTAatattaaatataaaataaaaaatattaaatattaagtC.....GTGAAG...........ACGCGGGTTCAACTCCTGCACTGGGCT tRNA-Sup-TTA-2-2 Sc: 36.3
Thr tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>..................<<<<<................>>>>>.......<<<<<<<<<<<<. GCCTTCTTGGCTCAGTTGGCA.GAGCGTCTGCCTAGTA...........AGCAGAAG...........GtCGTCAGTTCGATTCTGGCAGAAGGCA tRNA-Thr-AGT-1-1 Sc: 82.2 GCCTTCTTGGCTCAGTTGGCA.GAGCGTCTGCCTAGTAtgaaatatgttAGCAGAAG...........GtCGTCAGTTCGATTCTGGCAGAAGGCA tRNA-Thr-AGT-1-2 Sc: 74.9 >>>>>>>..>>>...........<<<.>>>>>..................<<<<<................>>>>>.......<<<<<<<<<<<<. GCCTCTTTGGCCCAGT.GGTA.AGGCGTCGCTCTCGTA...........AAGCGAAG...........AtCGGTGGTTCGAATCCGCCAAGGGGCT tRNA-Thr-CGT-1-1 Sc: 74.8 >>>>>>>..>>>>.........<<<<.>>>>>..................<<<<<................>>>>>.......<<<<<<<<<<<<. GCCGGCGTAGCTTAGT.GGTA.GAGCGTCAGTCTTGTA...........AACTGAAG...........GtCGGTGGTTCAATCCCGCCCGTCGGCT tRNA-Thr-TGT-1-1 Sc: 83.5 GTCGGGTTAGCTTAAT.GGTA.AAGCTTTCGTCTTGTA...........AACGAGGT...........A.TGGTGGTTCGATTCCGCTACCCGGCT mt-tRNA-Thr-TGT-2-1 Sc: 54.9
Trp tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<.<<<<<<<. GGGGGGTTGGCGCAATGGTA.GCGCGTCCGCCTCCAGAGCGGAAG...........GtTGGGTGTTCGAGTCACTC.ACTCCCCA tRNA-Trp-CCA-1-1 Sc: 71.1 >>>>.>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<.<<.<<<<. GGGGTGTTGGCGCAATGTTA.GCGCGTCCGCCTCCAGAGCGGAAA...........GtTGGGTGTTCGAGTCACTC.ACTCCCCA tRNA-Trp-CCA-2-1 Sc: 53.5 >>>>>>>..>>>>........<<<<.>.>>>.......<<<.<................>>>>>.......<<<<<.<<<<<<<. AGGAGAGTAGTTTAATGGTA.AAATGGTAAGCTCCAAACTTCTT............GtTGGGGGTTCGATTCCTCC.CTCTCCTG mt-tRNA-Trp-CCA-3-1 Sc: 46.0
Tyr tRNAs
>>>>>>>..>>>>........<<<<.>>>>>..............................<<<<<................>>>>>.......<<<<<<<<<<<<. CCGGCAATAGCTCAGTTGGTAGAGCGGGAGACTGTAGtgcaactgtt.............ATCTCTAG...........GtCGCTAGTTCAAATCTGGCTTGCCGGA tRNA-Tyr-GTA-1-1 Sc: 72.6 CCGGCAATAGCTCAGTTGGTAGAGCGGGAGACTGTAGtgagataaaaatctcagcctgttATCTCTAG...........GtCGCTAGTTCAAATCTGGCTTGCCGGA tRNA-Tyr-GTA-1-2 Sc: 72.1
Val tRNAs
>>>>>>>..>>>............<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<. GATTCCTTGGTGTAGTTGGTtA.TCACGTCAGCCTAACACGCTGAAG...........GtCGCCAGTTCGAACCTGGCAGGAATCA tRNA-Val-AAC-1-1 Sc: 77.8 >>>>>>>..>>>>..........<<<<..>>>>.......<<<<.................>>>>>.......<<<<<<<<<<<<. AGGAGATTAGCTTAAT.GGA.A.GAGTGGGTGCCTTACAAGCACAAG...........G.TGGCAGTTCGATTCTGCCATCTCCTA mt-tRNA-Val-TAC-1-1 Sc: 51.3