tRNA Gene Summary

Overview
tRNAs decoding standard 20 AA 94
Selenocysteine tRNAs (TCA) 0
Possible suppressor tRNAs (CTA,TTA,TCA) 6
tRNAs with undetermined or unknown isotypes 6
Predicted pseudogenes 5
Total tRNAs 111
Intron Summary (tRNAs with introns: 32)
Ala AGC
2
Ala CGC
1
Gly ACC
1
Gly TCC
1
Pro AGG
1
Pro CGG
1
Thr AGT
1
Arg CCG
1
Arg TCT
2
Leu TAA
1
Phe GAA
2
Asn ATT
2
Asn GTT
1
Lys CTT
1
Lys TTT
3
Asp GTC
1
Ile AAT
2
Ile TAT
4
Tyr GTA
2
Supres TTA
2
 

The codon usage of this genome was generated from protein-coding genes annotated in GenBank or RefSeq.
Number of CDS: 0
Number of Codons: 1738685

Four Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
Codon Usage (Percentage)
AlaAGC
3
GGC
 
CGC
1
TGC
1
5
GCT
0
GCC
0
GCG
0
GCA
0
0%
GlyACC
1
GCC
3
CCC
 
TCC
2
6
GGT
0
GGC
0
GGG
0
GGA
0
0%
ProAGG
1
GGG
 
CGG
2
TGG
2
5
CCT
0
CCC
0
CCG
0
CCA
0
0%
ThrAGT
2
GGT
 
CGT
1
TGT
2
5
ACT
0
ACC
0
ACG
0
ACA
0
0%
ValAAC
1
GAC
 
CAC
 
TAC
1
2
GTT
0
GTC
0
GTG
0
GTA
0
0%
Six Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
Codon Usage (Percentage)
SerAGA
2
GGA
 
CGA
1
TGA
3
ACT
 
GCT
2
 
 
 
 
8
TCT
0
TCC
0
TCG
0
TCA
0
AGT
0
AGC
0
 
 
 
 
0%
ArgACG
3
GCG
 
CCG
1
TCG
2
 
 
 
 
CCT
1
TCT
3
10
CGT
0
CGC
0
CGG
0
CGA
0
 
 
 
 
AGG
0
AGA
0
0%
LeuAAG
 
GAG
 
CAG
1
TAG
3
 
 
 
 
CAA
3
TAA
4
11
CTT
0
CTC
0
CTG
0
CTA
0
 
 
 
 
TTG
0
TTA
0
0%
Two Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
Codon Usage (Percentage)
PheAAA
 
GAA
3
 
 
 
 
3
TTT
0
TTC
0
 
 
 
 
0%
AsnATT
2
GTT
3
 
 
 
 
5
AAT
0
AAC
0
 
 
 
 
0%
Lys 
 
 
 
CTT
3
TTT
4
7
 
 
 
 
AAG
0
AAA
0
0%
AspATC
 
GTC
3
 
 
 
 
3
GAT
0
GAC
0
 
 
 
 
0%
Glu 
 
 
 
CTC
2
TTC
3
5
 
 
 
 
GAG
0
GAA
0
0%
HisATG
 
GTG
2
 
 
 
 
2
CAT
0
CAC
0
 
 
 
 
0%
Gln 
 
 
 
CTG
 
TTG
1
1
 
 
 
 
CAG
0
CAA
0
0%
Two Box and Other tRNA Sets
IsotypetRNA Count by AnticodonTotal
Codon Usage (Percentage)
IleAAT
2
GAT
2
 
 
TAT
4
8
ATT
0
ATC
0
 
 
ATA
0
0%
iMet/Met 
 
 
 
CAT
3/3
 
 
6
 
 
 
 
ATG
0
 
 
0%
TyrATA
 
GTA
2
 
 
 
 
2
TAT
0
TAC
0
 
 
 
 
0%
Supres 
 
TCA
3
CTA
 
TTA
3
6
Stop 
 
TGA
0
TAG
0
TAA
0
0%
CysACA
 
GCA
1
 
 
 
 
1
TGT
0
TGC
0
 
 
 
 
0%
Trp 
 
 
 
CCA
3
 
 
3
 
 
 
 
TGG
0
 
 
0%
SelCys 
 
 
 
 
 
TCA
 
0
 
 
 
 
 
 
 
 
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