tRNA Gene Summary

Use of uninitialized value in addition (+) at ./analyze-tRNAs2 line 509. Use of uninitialized value in addition (+) at ./analyze-tRNAs2 line 510.
Overview
tRNAs decoding standard 20 AA 105
Selenocysteine tRNAs (TCA) 0
Possible suppressor tRNAs (CTA,TTA,TCA) 2
tRNAs with undetermined or unknown isotypes 1
Predicted pseudogenes 11
Total tRNAs 119
Intron Summary (tRNAs with introns: 9)
Arg CCT
2
Leu TAA
1
Asn ATT
1
Ile TAT
1
Tyr GTA
3
Supres CTA
1
Four Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
AlaAGC
6
GGC
 
CGC
1
TGC
5
12
GlyACC
 
GCC
5
CCC
 
TCC
3
8
ProAGG
3
GGG
 
CGG
1
TGG
1
5
ThrAGT
3
GGT
 
CGT
1
TGT
1
5
ValAAC
7
GAC
 
CAC
1
TAC
2
10
Six Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
SerAGA
4
GGA
 
CGA
1
TGA
1
ACT
 
GCT
2
 
 
 
 
8
ArgACG
4
GCG
 
CCG
1
TCG
1
 
 
 
 
CCT
5
TCT
2
13
LeuAAG
2
GAG
 
CAG
 
TAG
1
 
 
 
 
CAA
3
TAA
2
8
Two Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
PheAAA
 
GAA
3
 
 
 
 
3
AsnATT
1
GTT
4
 
 
 
 
5
Lys 
 
 
 
CTT
6
TTT
2
8
AspATC
1
GTC
4
 
 
 
 
5
Glu 
 
 
 
CTC
3
TTC
3
6
HisATG
 
GTG
2
 
 
 
 
2
Gln 
 
 
 
CTG
1
TTG
3
4
Two Box and Other tRNA Sets
IsotypetRNA Count by AnticodonTotal
IleAAT
4
GAT
 
 
 
TAT
1
5
iMet/Met 
 
 
 
CAT
1/-
 
 
1
TyrATA
 
GTA
3
 
 
 
 
3
Supres 
 
TCA
1
CTA
1
TTA
 
2
CysACA
 
GCA
1
 
 
 
 
1
Trp 
 
 
 
CCA
2
 
 
2
SelCys 
 
 
 
 
 
TCA
 
0