tRNA Gene Summary

Overview
tRNAs decoding standard 20 AA 93
Selenocysteine tRNAs (TCA) 0
Possible suppressor tRNAs (CTA,TTA,TCA) 0
tRNAs with undetermined or unknown isotypes 1
Predicted pseudogenes 0
Total tRNAs 94
Intron Summary (tRNAs with introns: 4)
Ile TAT
1
Tyr GTA
3

The codon usage of this genome was generated from protein-coding genes annotated in GenBank or RefSeq.
Number of CDS: 0
Number of Codons: 102433

Four Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
Codon Usage (Percentage)
AlaAGC
5
GGC
 
CGC
 
TGC
 
5
GCT
0
GCC
0
GCG
0
GCA
0
0%
GlyACC
 
GCC
4
CCC
 
TCC
1
5
GGT
0
GGC
0
GGG
0
GGA
0
0%
ProAGG
 
GGG
1
CGG
1
TGG
2
4
CCT
0
CCC
0
CCG
0
CCA
0
0%
ThrAGT
3
GGT
 
CGT
1
TGT
 
4
ACT
0
ACC
0
ACG
0
ACA
0
0%
ValAAC
4
GAC
 
CAC
1
TAC
2
7
GTT
0
GTC
0
GTG
0
GTA
0
0%
Six Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
Codon Usage (Percentage)
SerAGA
2
GGA
 
CGA
2
TGA
 
ACT
 
GCT
3
 
 
 
 
7
TCT
0
TCC
0
TCG
0
TCA
0
AGT
0
AGC
0
 
 
 
 
0%
ArgACG
5
GCG
 
CCG
 
TCG
2
 
 
 
 
CCT
2
TCT
 
9
CGT
0
CGC
0
CGG
0
CGA
0
 
 
 
 
AGG
0
AGA
0
0%
LeuAAG
3
GAG
 
CAG
 
TAG
1
 
 
 
 
CAA
2
TAA
 
6
CTT
0
CTC
0
CTG
0
CTA
0
 
 
 
 
TTG
0
TTA
0
0%
Two Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
Codon Usage (Percentage)
PheAAA
 
GAA
4
 
 
 
 
4
TTT
0
TTC
0
 
 
 
 
0%
AsnATT
 
GTT
1
 
 
 
 
1
AAT
0
AAC
0
 
 
 
 
0%
Lys 
 
 
 
CTT
6
TTT
3
9
 
 
 
 
AAG
0
AAA
0
0%
AspATC
 
GTC
2
 
 
 
 
2
GAT
0
GAC
0
 
 
 
 
0%
Glu 
 
 
 
CTC
2
TTC
7
9
 
 
 
 
GAG
0
GAA
0
0%
HisATG
 
GTG
4
 
 
 
 
4
CAT
0
CAC
0
 
 
 
 
0%
Gln 
 
 
 
CTG
2
TTG
2
4
 
 
 
 
CAG
0
CAA
0
0%
Two Box and Other tRNA Sets
IsotypetRNA Count by AnticodonTotal
Codon Usage (Percentage)
IleAAT
5
GAT
 
 
 
TAT
1
6
ATT
0
ATC
0
 
 
ATA
0
0%
iMet/Met 
 
 
 
CAT
-/2
 
 
0
 
 
 
 
ATG
0
 
 
0%
TyrATA
 
GTA
3
 
 
 
 
3
TAT
0
TAC
0
 
 
 
 
0%
Supres 
 
TCA
 
CTA
 
TTA
 
0
Stop 
 
TGA
0
TAG
0
TAA
0
0%
CysACA
 
GCA
1
 
 
 
 
1
TGT
0
TGC
0
 
 
 
 
0%
Trp 
 
 
 
CCA
1
 
 
1
 
 
 
 
TGG
0
 
 
0%
SelCys 
 
 
 
 
 
TCA
 
0
 
 
 
 
 
 
 
 
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