tRNA Gene Summary

Overview
High confidence set 364
tRNAs decoding standard 20 AA 363
Selenocysteine tRNAs (TCA) 1
Notable atypical predictions  
Anticodon/isotype mismatch 21
Other tRNA-like predictions  
Primary filter (tRNAscan-SE pseudogenes) 198126
Secondary filter (low feature scores, possible rep. element) 12605
Tertiary filter (excessive isotype copies, possible rep. element) 51

Note: tRNA predictions in mitochondria and nuclear mitochondrial sequences (NUMTs) are not included in the current version of the database.

Intron Summary (tRNAs with introns: 14)
Arg TCT
5
Leu CAA
3
Ile TAT
3
Tyr GTA
3
Four Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
AlaAGC
31
GGC
 
CGC
3
TGC
7
41
GlyACC
 
GCC
11
CCC
5
TCC
9
25
ProAGG
8
GGG
 
CGG
3
TGG
6
17
ThrAGT
7
GGT
 
CGT
4
TGT
5
16
ValAAC
6
GAC
 
CAC
6
TAC
3
15
Six Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
SerAGA
9
GGA
 
CGA
3
TGA
4
ACT
 
GCT
11
 
 
 
 
27
ArgACG
6
GCG
 
CCG
3
TCG
5
 
 
 
 
CCT
7
TCT
6
27
LeuAAG
6
GAG
 
CAG
10
TAG
3
 
 
 
 
CAA
3
TAA
2
24
Two Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
PheAAA
 
GAA
8
 
 
 
 
8
AsnATT
 
GTT
13
 
 
 
 
13
Lys 
 
 
 
CTT
11
TTT
6
17
AspATC
 
GTC
15
 
 
 
 
15
Glu 
 
 
 
CTC
9
TTC
10
19
HisATG
 
GTG
10
 
 
 
 
10
Gln 
 
 
 
CTG
10
TTG
5
15
Two Box and Other tRNA Sets
IsotypetRNA Count by AnticodonTotal
IleAAT
8
GAT
 
CAT
 
TAT
3
11
iMet/Met 
 
 
 
CAT
8/5
 
 
13
TyrATA
 
GTA
3
 
 
 
 
3
Supres 
 
TCA
 
CTA
 
TTA
 
0
CysACA
 
GCA
40
 
 
 
 
40
Trp 
 
 
 
CCA
7
 
 
7
SelCys 
 
 
 
 
 
TCA
1
1