tRNA Gene Summary

Overview
tRNAs decoding standard 20 AA 268
Selenocysteine tRNAs (TCA) 0
Possible suppressor tRNAs (CTA,TTA,TCA) 0
tRNAs with undetermined or unknown isotypes 0
Predicted pseudogenes 2
Total tRNAs 270
Intron Summary (tRNAs with introns: 58)
Pro TGG
10
Ser CGA
1
Ser GCT
4
Leu TAG
3
Leu CAA
7
Phe GAA
10
Lys TTT
7
Ile TAT
2
Tyr GTA
8
Trp CCA
6
 

The codon usage of this genome was generated from protein-coding genes annotated in GenBank or RefSeq.
Number of CDS: 0
Number of Codons: 442

Four Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
Codon Usage (Percentage)
AlaAGC
11
GGC
 
CGC
 
TGC
5
16
GCT
0
GCC
0
GCG
0
GCA
0
0%
GlyACC
 
GCC
16
CCC
2
TCC
3
21
GGT
0
GGC
0
GGG
0
GGA
0
0%
ProAGG
2
GGG
 
CGG
 
TGG
10
12
CCT
0
CCC
0
CCG
0
CCA
0
0%
ThrAGT
11
GGT
 
CGT
1
TGT
4
16
ACT
0
ACC
0
ACG
0
ACA
0
0%
ValAAC
14
GAC
 
CAC
2
TAC
2
18
GTT
0
GTC
0
GTG
0
GTA
0
0%
Six Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
Codon Usage (Percentage)
SerAGA
11
GGA
 
CGA
1
TGA
3
ACT
 
GCT
4
 
 
 
 
19
TCT
0
TCC
0
TCG
0
TCA
0
AGT
0
AGC
0
 
 
 
 
0%
ArgACG
6
GCG
 
CCG
1
TCG
 
 
 
 
 
CCT
1
TCT
11
19
CGT
0
CGC
0
CGG
0
CGA
0
 
 
 
 
AGG
0
AGA
0
0%
LeuAAG
 
GAG
1
CAG
 
TAG
3
 
 
 
 
CAA
7
TAA
7
18
CTT
0
CTC
0
CTG
0
CTA
0
 
 
 
 
TTG
0
TTA
0
0%
Two Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
Codon Usage (Percentage)
PheAAA
 
GAA
10
 
 
 
 
10
TTT
0
TTC
0
 
 
 
 
0%
AsnATT
 
GTT
10
 
 
 
 
10
AAT
0
AAC
0
 
 
 
 
0%
Lys 
 
 
 
CTT
13
TTT
7
20
 
 
 
 
AAG
0
AAA
0
0%
AspATC
 
GTC
16
 
 
 
 
16
GAT
0
GAC
0
 
 
 
 
0%
Glu 
 
 
 
CTC
2
TTC
14
16
 
 
 
 
GAG
0
GAA
0
0%
HisATG
 
GTG
7
 
 
 
 
7
CAT
0
CAC
0
 
 
 
 
0%
Gln 
 
 
 
CTG
1
TTG
9
10
 
 
 
 
CAG
0
CAA
0
0%
Two Box and Other tRNA Sets
IsotypetRNA Count by AnticodonTotal
Codon Usage (Percentage)
IleAAT
13
GAT
 
 
 
TAT
2
15
ATT
0
ATC
0
 
 
ATA
0
0%
iMet/Met 
 
 
 
CAT
4/5
 
 
9
 
 
 
 
ATG
0
 
 
0%
TyrATA
 
GTA
8
 
 
 
 
8
TAT
0
TAC
0
 
 
 
 
0%
Supres 
 
TCA
 
CTA
 
TTA
 
0
Stop 
 
TGA
0
TAG
0
TAA
0
0%
CysACA
 
GCA
4
 
 
 
 
4
TGT
0
TGC
0
 
 
 
 
0%
Trp 
 
 
 
CCA
6
 
 
6
 
 
 
 
TGG
0
 
 
0%
SelCys 
 
 
 
 
 
TCA
 
0
 
 
 
 
 
 
 
 
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