tRNA Gene Summary

Overview
tRNAs decoding standard 20 AA 246
Selenocysteine tRNAs (TCA) 0
Possible suppressor tRNAs (CTA,TTA,TCA) 0
tRNAs with undetermined or unknown isotypes 0
Predicted pseudogenes 1
Total tRNAs 247
Intron Summary (tRNAs with introns: 58)
Ala CGC
1
Pro CGG
1
Val AAC
9
Val TAC
1
Ser CGA
2
Ser TGA
2
Ser GCT
5
Arg CCG
1
Arg CCT
1
Leu CAG
1
Leu CAA
3
Leu TAA
3
Lys CTT
13
Ile TAT
2
Met CAT
5
Tyr GTA
8

The codon usage of this genome was generated from protein-coding genes annotated in GenBank or RefSeq.
Number of CDS: 0
Number of Codons: 1758

Four Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
Codon Usage (Percentage)
AlaAGC
9
GGC
 
CGC
1
TGC
3
13
GCT
0
GCC
0
GCG
0
GCA
0
0%
GlyACC
 
GCC
17
CCC
1
TCC
8
26
GGT
0
GGC
0
GGG
0
GGA
0
0%
ProAGG
15
GGG
 
CGG
1
TGG
2
18
CCT
0
CCC
0
CCG
0
CCA
0
0%
ThrAGT
10
GGT
 
CGT
1
TGT
2
13
ACT
0
ACC
0
ACG
0
ACA
0
0%
ValAAC
9
GAC
 
CAC
2
TAC
2
13
GTT
0
GTC
0
GTG
0
GTA
0
0%
Six Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
Codon Usage (Percentage)
SerAGA
11
GGA
 
CGA
2
TGA
2
ACT
 
GCT
5
 
 
 
 
20
TCT
0
TCC
0
TCG
0
TCA
0
AGT
0
AGC
0
 
 
 
 
0%
ArgACG
13
GCG
 
CCG
1
TCG
2
 
 
 
 
CCT
1
TCT
3
20
CGT
0
CGC
0
CGG
0
CGA
0
 
 
 
 
AGG
0
AGA
0
0%
LeuAAG
6
GAG
 
CAG
1
TAG
1
 
 
 
 
CAA
3
TAA
3
14
CTT
0
CTC
0
CTG
0
CTA
0
 
 
 
 
TTG
0
TTA
0
0%
Two Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
Codon Usage (Percentage)
PheAAA
 
GAA
7
 
 
 
 
7
TTT
0
TTC
0
 
 
 
 
0%
AsnATT
 
GTT
9
 
 
 
 
9
AAT
0
AAC
0
 
 
 
 
0%
Lys 
 
 
 
CTT
13
TTT
5
18
 
 
 
 
AAG
0
AAA
0
0%
AspATC
 
GTC
8
 
 
 
 
8
GAT
0
GAC
0
 
 
 
 
0%
Glu 
 
 
 
CTC
5
TTC
8
13
 
 
 
 
GAG
0
GAA
0
0%
HisATG
 
GTG
7
 
 
 
 
7
CAT
0
CAC
0
 
 
 
 
0%
Gln 
 
 
 
CTG
2
TTG
8
10
 
 
 
 
CAG
0
CAA
0
0%
Two Box and Other tRNA Sets
IsotypetRNA Count by AnticodonTotal
Codon Usage (Percentage)
IleAAT
7
GAT
 
 
 
TAT
2
9
ATT
0
ATC
0
 
 
ATA
0
0%
iMet/Met 
 
 
 
CAT
6/5
 
 
11
 
 
 
 
ATG
0
 
 
0%
TyrATA
 
GTA
8
 
 
 
 
8
TAT
0
TAC
0
 
 
 
 
0%
Supres 
 
TCA
 
CTA
 
TTA
 
0
Stop 
 
TGA
0
TAG
0
TAA
0
0%
CysACA
 
GCA
5
 
 
 
 
5
TGT
0
TGC
0
 
 
 
 
0%
Trp 
 
 
 
CCA
5
 
 
5
 
 
 
 
TGG
0
 
 
0%
SelCys 
 
 
 
 
 
TCA
 
0
 
 
 
 
 
 
 
 
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