tRNA Gene Summary

Overview
tRNAs decoding standard 20 AA 178
Selenocysteine tRNAs (TCA) 0
Possible suppressor tRNAs (CTA,TTA,TCA) 0
tRNAs with undetermined or unknown isotypes 0
Predicted pseudogenes 3
Total tRNAs 181
Intron Summary (tRNAs with introns: 137)
Ala CGC
2
Ala TGC
4
Gly GCC
7
Gly CCC
2
Gly TCC
3
Pro AGG
3
Pro CGG
1
Pro TGG
5
Thr AGT
5
Thr CGT
1
Thr TGT
3
Val AAC
6
Val CAC
2
Val TAC
2
Ser CGA
2
Ser TGA
4
Ser GCT
7
Arg ACG
3
Arg CCG
1
Arg TCG
4
Arg CCT
2
Arg TCT
2
Leu AAG
6
Leu CAG
1
Leu CAA
4
Leu TAA
2
Phe GAA
7
Asn GTT
5
Lys TTT
2
Asp GTC
6
Glu CTC
7
Glu TTC
5
His GTG
4
Ile AAT
5
Met CAT
3
Tyr GTA
5
Cys GCA
3
Trp CCA
1
 

The codon usage of this genome was generated from protein-coding genes annotated in GenBank or RefSeq.
Number of CDS: 0
Number of Codons: 74640

Four Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
Codon Usage (Percentage)
AlaAGC
6
GGC
 
CGC
2
TGC
4
12
GCT
0
GCC
0
GCG
0
GCA
0
0%
GlyACC
 
GCC
7
CCC
2
TCC
7
16
GGT
0
GGC
0
GGG
0
GGA
0
0%
ProAGG
3
GGG
 
CGG
1
TGG
5
9
CCT
0
CCC
0
CCG
0
CCA
0
0%
ThrAGT
5
GGT
 
CGT
1
TGT
3
9
ACT
0
ACC
0
ACG
0
ACA
0
0%
ValAAC
6
GAC
 
CAC
2
TAC
2
10
GTT
0
GTC
0
GTG
0
GTA
0
0%
Six Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
Codon Usage (Percentage)
SerAGA
6
GGA
 
CGA
2
TGA
4
ACT
 
GCT
7
 
 
 
 
19
TCT
0
TCC
0
TCG
0
TCA
0
AGT
0
AGC
0
 
 
 
 
0%
ArgACG
5
GCG
 
CCG
1
TCG
4
 
 
 
 
CCT
3
TCT
4
17
CGT
0
CGC
0
CGG
0
CGA
0
 
 
 
 
AGG
0
AGA
0
0%
LeuAAG
6
GAG
 
CAG
1
TAG
 
 
 
 
 
CAA
4
TAA
2
13
CTT
0
CTC
0
CTG
0
CTA
0
 
 
 
 
TTG
0
TTA
0
0%
Two Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
Codon Usage (Percentage)
PheAAA
 
GAA
7
 
 
 
 
7
TTT
0
TTC
0
 
 
 
 
0%
AsnATT
 
GTT
5
 
 
 
 
5
AAT
0
AAC
0
 
 
 
 
0%
Lys 
 
 
 
CTT
7
TTT
3
10
 
 
 
 
AAG
0
AAA
0
0%
AspATC
 
GTC
6
 
 
 
 
6
GAT
0
GAC
0
 
 
 
 
0%
Glu 
 
 
 
CTC
7
TTC
5
12
 
 
 
 
GAG
0
GAA
0
0%
HisATG
 
GTG
4
 
 
 
 
4
CAT
0
CAC
0
 
 
 
 
0%
Gln 
 
 
 
CTG
2
TTG
5
7
 
 
 
 
CAG
0
CAA
0
0%
Two Box and Other tRNA Sets
IsotypetRNA Count by AnticodonTotal
Codon Usage (Percentage)
IleAAT
5
GAT
 
 
 
TAT
 
5
ATT
0
ATC
0
 
 
ATA
0
0%
iMet/Met 
 
 
 
CAT
4/3
 
 
7
 
 
 
 
ATG
0
 
 
0%
TyrATA
 
GTA
5
 
 
 
 
5
TAT
0
TAC
0
 
 
 
 
0%
Supres 
 
TCA
 
CTA
 
TTA
 
0
Stop 
 
TGA
0
TAG
0
TAA
0
0%
CysACA
 
GCA
3
 
 
 
 
3
TGT
0
TGC
0
 
 
 
 
0%
Trp 
 
 
 
CCA
5
 
 
5
 
 
 
 
TGG
0
 
 
0%
SelCys 
 
 
 
 
 
TCA
 
0
 
 
 
 
 
 
 
 
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