tRNA Gene Summary

Overview
High confidence set 472
tRNAs decoding standard 20 AA 471
Selenocysteine tRNAs (TCA) 1
Notable atypical predictions  
Anticodon/isotype mismatch 21
Unexpected anticodons 1
Non-canonical anticodon loop length 1
Other tRNA-like predictions  
Primary filter (tRNAscan-SE pseudogenes) 58930
Secondary filter (low feature scores, possible rep. element) 3761
Tertiary filter (excessive isotype copies, possible rep. element) 39

Note: tRNA predictions in mitochondria and nuclear mitochondrial sequences (NUMTs) are not included in the current version of the database.

Intron Summary (tRNAs with introns: 31)
Arg TCT
5
Leu CAA
6
Ile TAT
5
Tyr GTA
15
Four Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
AlaAGC
20
GGC
 
CGC
7
TGC
12
39
GlyACC
 
GCC
19
CCC
4
TCC
12
35
ProAGG
8
GGG
 
CGG
4
TGG
6
18
ThrAGT
11
GGT
 
CGT
6
TGT
7
24
ValAAC
10
GAC
 
CAC
10
TAC
7
27
Six Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
SerAGA
10
GGA
 
CGA
5
TGA
4
ACT
 
GCT
11
 
 
 
 
30
ArgACG
8
GCG
 
CCG
4
TCG
6
 
 
 
 
CCT
7
TCT
6
31
LeuAAG
7
GAG
 
CAG
11
TAG
4
 
 
 
 
CAA
6
TAA
5
33
Two Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
PheAAA
 
GAA
15
 
 
 
 
15
AsnATT
 
GTT
13
 
 
 
 
13
Lys 
 
 
 
CTT
14
TTT
16
30
AspATC
 
GTC
19
 
 
 
 
19
Glu 
 
 
 
CTC
11
TTC
36
47
HisATG
 
GTG
9
 
 
 
 
9
Gln 
 
 
 
CTG
10
TTG
6
16
Two Box and Other tRNA Sets
IsotypetRNA Count by AnticodonTotal
IleAAT
14
GAT
 
CAT
 
TAT
5
19
iMet/Met 
 
 
 
CAT
11/10
 
 
21
TyrATA
 
GTA
16
 
 
 
 
16
Supres 
 
TCA
 
CTA
 
TTA
 
0
CysACA
 
GCA
20
 
 
 
 
20
Trp 
 
 
 
CCA
9
 
 
9
SelCys 
 
 
 
 
 
TCA
1
1