Structurally Aligned tRNAs (by Isotype & Anticodon)

Structural alignments are generated by aligning tRNA sequences against domain-specific tRNA covariance models with the use of COVE.

Ala tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.........................................................................<<<<<................>>>>>.........<<<<<<<<<<<<. GGGCGCTTGGCTTAGT.GGT.A.AAGCGCTCCCTTAGCAtgttctaaacacc...................................................T..GGGAGAG...........GtCCAGGGTTCGATT..CCCTGAGTGTCCA tRNA-Ala-AGC-1-4 Sc: 67.7 GGGCGCTTGGCTTAGT.GGT.A.AAGCGCTCCCTTAGCAtgtttcgagcatctcgagcatctgta......................................T..GGGAGAG...........GtCCAGGGTTCGATT..CCCTGAGTGTCCA tRNA-Ala-AGC-1-1 Sc: 67.2 GGGCGCTTGGCTTAGT.GGT.A.AAGCGCTCCCTTAGCAagtcccgagcaatcggccttcatc........................................T..GGGAGAG...........GtCCAGGGTTCGATT..CCCTGAGTGTCCA tRNA-Ala-AGC-1-2 Sc: 67.2 GGGCGCTTGGCTTAGT.GGT.A.AAGCGCTCCCTTAGCAtacttcctccgtccaagtaggctctc......................................T..GGGAGAG...........GtCCAGGGTTCGATT..CCCTGAGTGTCCA tRNA-Ala-AGC-1-3 Sc: 67.2 >>>>>>>..>>>............<<<.>>>>>.........................................................................<<<<<................>>>>>.........<<<<<<<<<<<<. GGGCGGGTGGTCTAGT.GGT.A.TGATTTTCCCTTAGCAtgttctgagcaattggtcttctc.........................................T..GGGAGAG...........GtCCGGGGTTCAATT..CCCCGTCTGTCCA tRNA-Ala-AGC-2-1 Sc: 59.0 >>>.>>>..>>>............<<<.>>>>>.........................................................................<<<<<.................>>>>.........<<<<.<<<.<<<. GGGCGGGTGGTCTAGT.GGT.A.TGATTTTCCCTTAGCAtgattggatctttaaatcggatcctcgagcgct...............................T..GGGAGAG...........GtCCGGGGT..AATT..TCCCCTCTATCCA tRNA-Ala-AGC-3-1 Sc: 23.9 >>>>>.>..>>>............<<<.>>>>>.........................................................................<<<<<................>>>>>.........<<<<<<.<<<<<. GGGCGTGTGGTCTAGT.GGT.A.TGACGTCGGCTTCGCAtttccgatcatctgatacacgtgcgtc.....................................T..GCTGAAG...........GtCCGGAGTTCGATT..CTCCGTTCGTCCA tRNA-Ala-CGC-1-1 Sc: 59.1 >>>>>>>..>>>>..........<<<<..>>>>.........................................................................<<<<.................>>>>>.........<<<<<<<<<<<<. GGGGATATGGCGCAGT.GGT.A.GCGCGCTTGCTTTGCA................................................................T..GCAATAG...........GtCGGGGGTTCAAGT..CCCTCTATCTCCA tRNA-Ala-TGC-1-1 Sc: 69.0 >>>>>>>..>>>>..........<<<<.>>>>>.........................................................................<<<<<................>>>>>.........<<<<<<<<<<<<. GGGGATATAATTCAAT.GGT.A.GAATCCTGACTTTGCA................................................................C..GTCAGTA...........G.TCTAAGTTCGAGT..CTTAGTATCTCCA tRNA-Ala-TGC-2-1 Sc: 49.8 >>>>>>>..>>>>..........<<<<.>>...............................................................................<<................>>>>>.........<<<<<<<<<<<<. TCCGCCATGGCGCAATTGGTtA.GCGCGTC.....GTAAgttgccctcaataccagacgcaacagacacataatgtctaacaacttgttcacagtgactgttaA..TCAGGAG...........GcTGTAAGTTCGAGT..CTTACTGGCGGAG tRNA-Ala-TGC-3-1 Sc: 44.7
Arg tRNAs
>>>>>>>..>>>............<<<.>>.>>>............................................................................<<<<<................>>>>>............<<<<<<<<<<<..<. GGTCGCATGGCCCAATG.GC.A.AGGCGTC.TGAC.TACGA....................................................................ATCAGGAG...........AtTGTGGGTTCGATC.....CCCACTGTGAC..CT tRNA-Arg-ACG-2-1 Sc: 72.8 GGTCTCGTGGCCCAATG.GC.A.AGGCGTC.TGAC.TACGA....................................................................ATCAGGAG...........AtTGTGGGTTCGACC.....CCCACCGAGAC..CT tRNA-Arg-ACG-1-1 Sc: 71.6 GGTCTCGTGGCCCAATG.GC.A.AGGCATC.TGAC.TACGA....................................................................ATCAGGAG...........AtTGTGGGTTCGACC.....CCCACCGAGGC..CT tRNA-Arg-ACG-3-1 Sc: 67.5 >>>>>>>..>>>............<<<.>>.>>..............................................................................<<<<................>>.>>............<<.<<<<<<<<..<. GGTCGCATGGCCCAACG.GC.A.AGGCGTC.TGAC.TACGA....................................................................ACCAGGAG...........AtTGTAGGT.....C.....CCCACTGTGAC..CT tRNA-Arg-ACG-4-1 Sc: 23.6 >>>>>>>..>>.>..........<.<<.>..>>>............................................................................<<<.<................>>>>>............<<<<<<<<<<<..<. GGCCGCGTAGATCAGTGaGT...GCTTTCA.GTTC.CCCCAgcacgaatccgcgttaacctttccccagatggctagatcgtcactttccggctcctgtcgccaa....TGGTGGAG...........GcTGCAGGTTCGAGT.....CCTGCCGCGGT..CG tRNA-Arg-CCG-1-1 Sc: 28.0 >>>>>>>..>>>>..........<<<<.>>.>>>............................................................................<<<<<................>>>>>............<<<<<<<<<<<..<. GGCCGCGTGGCCTAATG.GCtA.AGGCGCT.AGAT.TTCGGtcttctaaaat.........................................................CTCTAGAG...........AtTCCAGGTTCGACT.....CCTGGCGTGGT..CG tRNA-Arg-TCG-1-2 Sc: 59.3 GGCCGCGTGGCCTAATG.GCtA.AGGCGCT.AGAT.TTCGGctagtacacgataat.....................................................CTCTAGAG...........AtTCCAGGTTCGACT.....CCTGGCGTGGT..CG tRNA-Arg-TCG-1-1 Sc: 59.2 >>>>>>>..>>>>..........<<<<.>>.>>>............................................................................<<<<<................>>>>>............<<<<<<<<<<<..<. GGCGTGCTGGCGCAATG.GG.A.GCGCGTA.GTCC.TCCTAagcatctgca..........................................................AGACTAAG...........GtTGAGGGTTCGAGT.....CCCTCGTACGT..CG tRNA-Arg-CCT-1-1 Sc: 59.9 >>>>>>>..>>>>..........<<<<.>>.>>>............................................................................<<<<<................>>>>>............<<<<<<<<<<<..<. GCCCCGTTAGCTCAGTG.GTcA.GAGCGTG.TCACgTCTTCtctcttctctctaccttaacctaaaatcttctttcactccgactccgttcctatatacctaaaatcttCTGGCAAG...........A.CACTGGTTCGAAT.....CCGGTACGGGG..CA tRNA-Arg-TCT-2-1 Sc: 55.3 GCCCCGTTAGCTCAGTG.GC.A.GAGCGTGtCCAT.CTCTTtcttccgtctcctataaatttctcttctttccgctccgctcctataacctaaactctca.........ATGGCAAG...........G.CACTGGTTCGATT.....CCAGTACGGGG..CA tRNA-Arg-TCT-3-1 Sc: 52.5 TTCTTATTAGCTCAATG.GT.A.GAGCATA.ATAC.TTCTA....................................................................ATATTATG...........A.TTTTGGTTCGACT.....CCAGAATAAGAttAA tRNA-Arg-TCT-1-1 Sc: 47.2
Asn tRNAs
>>>>>>>..>>>>........<<<<..>>>>>...........................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GTTTCTATAGCTCAATGGTA.GAGCAaGGATACTATTA....................................................ATATTCTG...........G.TAGATGTTCGATTCATCTTAGAAGCT tRNA-Asn-ATT-1-1 Sc: 43.4 >>>>>>>..>>>>........<<<<..>>>>>...........................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GCCCCTGTAGCGCAATGGTA.GCGCG.TGAGACTGTTCgtgccctctagttcctctatttctcttgctcaactaacaaagatacagtctaATCTCAAG...........GtTGCGGGTTCGAGCCCCGCCAGGGGTT tRNA-Asn-GTT-1-1 Sc: 70.1 GTTTCTATAGCTCAACGGTA.GAGCA.TGATACTGTTA....................................................ATATTATG...........A.TAGATGTTCGATTCATCTTAGAAGCT tRNA-Asn-GTT-2-1 Sc: 49.4
Asp tRNAs
.>>>>>>..>>>>...........<<<<....>..>>..............................................................<<..<..>..>.......<..<...>>>>>.......<<<<<<<<<<<.. GCCAAACTGGTGTAACT.GGT.A.GCACA...GTCGGGTATCAcctaggaggcagatctgctagg.................................CCCTTCGGGGGG.......CGACGgTCTTGGTTCGAGTCCAAGGTTTGGAA tRNA-Asp-ATC-1-1 Sc: 33.1 >>>>>>>..>>>>...........<<<<....>>>>>..............................................................<<<<<....................>>>>>.......<<<<<<<<<<<<. TCTTCCGTAGTATAGT..GGTcA.GTATG...CAAGCTTGTCA.......................................................CGCTTGAG...............A.CCCGGGTTCAATTCCCGGCGGGAGAG tRNA-Asp-GTC-1-1 Sc: 69.5 TCTTCCGTAGTATAGT..GGTcA.GTATG...CAAGCTTGTCA.......................................................CGCTTGAG...............A.CCCGGGTTCAATTCCCGGCGGGAGAG tRNA-Asp-GTC-1-2 Sc: 69.5 TCTTCCGTAGTATAGT..GGTcA.GTATG...CAAGCTTGTCA.......................................................CGCTTGAG...............A.CCCGGGTTCAATTCCCGGCGGGAGAG tRNA-Asp-GTC-1-3 Sc: 69.5 TCTTCCGTAGTATAGT..GGTcA.GTATG...CAAGCTTGTCA.......................................................CGCTTGAG...............A.CCCGGGTTCAATTCCCGGCGGGAGAG tRNA-Asp-GTC-1-4 Sc: 69.5 >>>>>>>...>>>...........<<<.....>>>>>..............................................................<<<<<....................>>>>>.......<<<<<<<<<<<<. GAATTAGTAACTTAATTaGGT.A.AAGGA...TTTCCTTGTCA.......................................................CGGAAATA...............GaTGTCGGTTCGATTCTGATTTAATTCG tRNA-Asp-GTC-2-1 Sc: 26.4 >>>>>>>..>>>>...........<<<<....>..>................................................................<..<....................>>>>>.......<<<<<<<<<<<<. AGCAAGGTGGCGCAGT..GGA.A.GCGCGgtaCGTGTTTGTCAaagctcttcttttatacaagcatttcgactaactccttacccagccgggctcataACCCGGAG...............GaCGACGGATCGAAACTGTCTCTTGCTA tRNA-Asp-GTC-3-1 Sc: 24.4
Cys tRNAs
>>>>>>>..>>>>........<<<<.>>>>>....................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGTCTGGTAGCTCAGGGGTA.GAGCGAGCGCCTGCAG.............................AGCGCTAG...........GtCACGCGTTCAAATCGCGTTCAGACCT tRNA-Cys-GCA-2-1 Sc: 71.0 >>>>>>>..>>>>........<<<<..>>>>....................................<<<<.................>>>>>.......<<<<<<<<<<<<. GCTCGGATAGCTCAGCGGTA.GAGCGGCAGATTGCAGctgaggtgcgacagcaccaacattcagtcATCTGATG...........GtCCCTGGTTCAATCCCGGGTTCGAGCT tRNA-Cys-GCA-1-1 Sc: 66.7
Gln tRNAs
>>>>>>>..>>>...........<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<. GCTTGCATGGTCTAATGGTtA.TGACTCCAGATTCTGATTCTGGCA...........GCGGCGGTTCGATTCCGCCTGTGAGCT tRNA-Gln-CTG-2-1 Sc: 66.0 GCTTGCATGGTCTAATGGTtA.TGACTCCAGATTCTGATTCTGGCA...........GCGGCGGTTCGATTCCGCCTGTGAGCT tRNA-Gln-CTG-2-2 Sc: 66.0 GGTTCCATGGTCTAACGGTcA.TGACTCCAGATTCTGATTCTGGCA...........GCGAGGGTTCGACTCCCTCTGGGACCT tRNA-Gln-CTG-1-1 Sc: 62.8 GGTTTCATGGTCTAACGGTcA.TGACTCCAGATTCTGATTCTGGCA...........GCGAGGGTTCGACTCCCTCTGAGACCT tRNA-Gln-CTG-3-1 Sc: 62.6 >>.>>>>..>>>>.........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<.<<. GGCCCATTCATCTAGTGGTtA.GGATGCTGGGTTTTGATTCCAGAA...........ACGTCAGTTCGAATCTGGCATGGACCT tRNA-Gln-TTG-1-1 Sc: 45.3
Glu tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>...............................................................................<<<<<...........................>>>>>.......<<<<<<<<<<<<. TCCGGTATGGTGTAGT.GGCtA.ACATCGCTCGCTCTCAtgcatgaa................................................................CCGAGCAG......................C.CCAGGGTTCGATTCCCTGTACCGGAG tRNA-Glu-CTC-1-2 Sc: 49.3 TCCGGTATGGTGTAGT.GGCtA.ACATCGCTCGCTCTCAtcaaagaa................................................................CCGAGCAG......................C.CCAGGGTTCGATTCCCTGTACCGGAG tRNA-Glu-CTC-1-3 Sc: 49.3 TCCGGTATGGTGTAGT.GGCtA.ACATCGCTCGCTCTCAtaaagcagaa..............................................................CCGAGCAG......................C.CCAGGGTTCGATTCCCTGTACCGGAG tRNA-Glu-CTC-1-4 Sc: 49.3 TCCGGTATGGTGTAGT.GGCtA.ACATCGCTCGCTCTCAttcgagtagca.............................................................CCGAGCAG......................C.CCAGGGTTCGATTCCCTGTACCGGAG tRNA-Glu-CTC-1-1 Sc: 49.2 >>>>>>>..>>>>..........<<<<.>>.>>...............................................................................<<.<<...>>>>..........<..<<<....>>>>>.......<<<<<<<<<<<<. TCCAGACTGGTGTAAATGGT.A.GCATAATCGGTTCTCA........................................................................CCCTGTAGGGCCCTTCGggg...GGTGGTAG.TTCTGGTTCGAGCCCAGGGTTTGGAC tRNA-Glu-CTC-2-1 Sc: 27.3 >>>>>>>..>>>>..........<<<<.>>>>>...............................................................................<<<<<...........................>>>>>.......<<<<<<<<<<<<. TCCGATGTGGTCTAAC.GGTtA.GGATAGTGCGCTTTCAatgggtccgccctggaagat....................................................CCGCATTG......................G.CCGGGGTTCGACTCCCCGCATCGGAG tRNA-Glu-TTC-1-1 Sc: 56.8 >>>>>>>..>>>>..........<<<<.>>>>.................................................................................<<<<...........................>>>>>.......<<<<<<<<<<<<. GCCCCGTTAGCTCAGT.GGT.A.GAGCGTGCTTGTCTTCtcttctctcccatacctaaaaacctaaaatctctcttcactccgactccgttcctatgctcctattaattctTCGGCAAG......................G.CACTGGTTCGATTCCAGTATGGGGCA tRNA-Glu-TTC-3-1 Sc: 53.1 >>>>>>>..>>>............<<<.>>>>.................................................................................<<<<...........................>>>>>.......<<<<<<<<<<<<. GGACTAGTAGTCAAGT.GGTtA.AGACATAGCCCTTTCA........................................................................CAGCTATT......................AcCGCAGGTTCGAAACCTGTCTAGTCTA tRNA-Glu-TTC-2-1 Sc: 48.2
Gly tRNAs
>>>>>>>..>>>>.........<<<<.>>.>>>..............................................................................<<<<.<...............>>>>>.......<<<<<<<<<<<<. GCGTGAATGGTTTAGTGGT.A.AAATTCT.CCGTTGCCAtccgagcaacg............................................................TCGGG.GAG...........CCCTGGGTTCGATTCCCAGTTCACGCA tRNA-Gly-GCC-1-1 Sc: 60.1 GCGTGAATGGTTTAGTGGT.A.AAATTCT.CCGTTGCCAtccgagcaacg............................................................TCGGG.GAG...........CCCTGGGTTCGATTCCCAGTTCACGCA tRNA-Gly-GCC-1-2 Sc: 60.1 GCGTGAATGGTTTAGTGGT.A.AAATTCT.CCGTTGCCAtccgagcaacg............................................................TCGGG.GAG...........CCCTGGGTTCGATTCCCAGTTCACGCA tRNA-Gly-GCC-1-3 Sc: 60.1 GCGTGAATGGTTTAGTGGT.A.AAATTCT.CCGTTGCCAtccgagcaacg............................................................TCGGG.GAG...........CCCTGGGTTCGATTCCCAGTTCACGCA tRNA-Gly-GCC-1-4 Sc: 60.1 GCGTGAATGGTTTAGTGGT.A.AAATTCT.CCGTTGCCAtccgagcaacg............................................................TCGGG.GAG...........CCCTGGGTTCGATTCCCAGTTCACGCA tRNA-Gly-GCC-1-5 Sc: 60.1 GCGTGATTGGTTTAGTGGT.A.AAATTCT.CCGTTGCCAtccgtgcaacg............................................................TCGGG.GAG...........CCCTGGGTTCGATTCCCAGATCACGCA tRNA-Gly-GCC-2-1 Sc: 58.9 >>>>>>>..>>>>.........<<<<.>>.>>>..............................................................................<<<<.<...............>>>>>.......<<<<<<<<<<<<. GCGCGAGTAGTATAGTGGTtA.GTATGCG.TGCTTCCCAagtgcggaatt............................................................AGCAC.GAG...........AGCCGGGTTCGATTCCCGGCTCGCGCA tRNA-Gly-CCC-1-1 Sc: 63.8 >>>>.>>..>>>>.........<<<<.>>.>>>..............................................................................<<<<.<...............>>>>>.......<<<<<<<.<<<<. GCCCCGTTAGCTCAGTGGT.A.GAGCGTGtCCATGCCCCccccccctctctctctcttccgctacctatgatgcctaaactcttatatccgctccgctctcctagaacacATGGC.AAG...........ACACTGGTTCGATTCCAGTGCAGGGCA tRNA-Gly-CCC-2-1 Sc: 38.8 >>>>>>>..>>>>.........<<<<.>>.>>>..............................................................................<<<<.<...............>>>>>.......<<<<<<<<<<<<. GCTTACTTGGTCTAATGGTtA.GGATTAC.TGCCTTCCA.......................................................................AGCAG.TAG...........GTTCGAGTTCAATTCTCGGAGTAAGCA tRNA-Gly-TCC-1-1 Sc: 63.7 >>>>>>>..>>>>.........<<<<.>>..>>..............................................................................<<.<.<...............>>>>>.......<<<<<<<<<<<<. GCGGGTATAAGTTAATGGT.A.GACTAGC.TGACTTCCA.......................................................................ATCTG.TAA...........GTGTCAGTTCAAATCTGACTACCCGTA tRNA-Gly-TCC-3-1 Sc: 47.7 >>>>>>>..>>>...........<<<.>>..>>..............................................................................<<.<.<...............>>>>>.......<<<<<<<<<<<<. GCAGGTATAAGTTAATGGT.A.TACTAGC.TGACTTCCC.......................................................................ATCCGgTAA...........GCGTCAGTTCGAATCTGGTTACCTGCA tRNA-Gly-TCC-2-1 Sc: 35.3 >>>>>>>..>>.............<<....>>................................................................................<<..................>>>>>.......<<<<<<<<<<<<. GCTTACTTGGTCTAACGGTaA.TTACTAC.CGAATTCCCcaggaattcacctcattctaactcctttccaggttaggatccacgccttcca...................AGCGT.GGG...........GTAAGGGTTCGACTCCCTTAGTAAGCA tRNA-Gly-TCC-4-1 Sc: 29.9
His tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>....................<<<<<................>>>>>.......<<<<<.<<<<<<<. GCCGCGATCGTCTAGT.GGTtA.GGACATTAGTTTGTGGaaatcaaactgtgCACTGAAA...........A.CGGCGGTTCGATTCCGCC.TCGTGGCA tRNA-His-GTG-1-1 Sc: 53.8 GCCGCAATCGTCTAGT.GGTtA.GGACATTAGTTTGTGGaaaccaaactgtgCACTGAAA...........A.CGGCGGTTCGATTCCGCC.TTGTGGCA tRNA-His-GTG-2-1 Sc: 52.4 >>>>>.>..>>>>..........<<<<.>>>>>....................<<<<<................>>>>>.......<<<<<.<.<<<<<. GTGAATATAGCTTAATCGGT.A.AAGTAACTATTTGTGG.............CATAGTC............GtTCCTGGTTCAAGTCCAGG.TTTTCACC tRNA-His-GTG-3-1 Sc: 42.1
Ile tRNAs
>>>>>>>..>>>>..........<<<<.>>.>>>...........................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGTTCCATAGTTCAGTTGGTtA.GAGCATC.GTACTAATAtagtaaccctatatctgta.................................ATGCGAAA...........GtCGTGAGTTCGAGCCTCACTGGGACCA tRNA-Ile-AAT-1-1 Sc: 66.7 >>>>>>>..>>>>..........<<<<.>>.>.>...........................................................<.<<<................>>>>>.......<<<<<<<<<<<<. TCCGCCATGGCGCAATTGGTtA.GCGCGTCgTAAGTAATAttcggtctaaactgggaatcatggattctaatatctcctctagtgactgttaATCAGGAG...........GcTGTAAGTTCGAGTCTTACTGGCGGAG tRNA-Ile-AAT-2-1 Sc: 49.0 >>>>>>>..>>>>..........<<<<.>>.>>.............................................................<<<<................>>>>>.......<<<<<<<<<<<<. GGTCTCGTAGCGGAGT.GGTtA.CCGTTGT.GTTCTTATActttcattatgattggaagct...............................ATGCATAG...........GtCGTGAGTTCGAACCTCACCGAGACCA tRNA-Ile-TAT-1-1 Sc: 59.7
Leu tRNAs
>>>>>>>..>>>>...........<<<<.>>>>>.......................................................<<<<<..>>...............<<...>>>>>.......<<<<<.<<<<<<<. GGTGAGATGGCCGAGTTGGTt.A.TGGCGCCAGGTTAAGGttaccttaatagcatt................................TCCTGGTGGGGC...........AACCCtCGTGGGTTCAAATCCCAC.TCTCATCA tRNA-Leu-AAG-1-1 Sc: 63.1 GGTGAGATGGCCGAGTTGGTt.A.TGGCGCCAGGTTAAGGttaccttaatagcatt................................TCCTGGTGGGGC...........AACCCtCGTGGGTTCAAATCCCAC.TCTCATCA tRNA-Leu-AAG-1-2 Sc: 63.1 GGTGAGATGGCCGAGTTGGTt.A.TGGCGCCAGGTTAAGGataccttaacatcgtt................................TCCTGGTGGAGC...........AATCCtCATGGGTTCGAATCCCAT.TCTCATCA tRNA-Leu-AAG-2-1 Sc: 58.6 >>>>>>>..>>>.............<<<.>>>>>.......................................................<<<<<..>>...............<<...>>>>>.......<<<<<.<<<<<<<. GGCAAGATGGCCGAGT.GGTctA.AGGCGCTGTGTTCAGGaagttggaaa......................................TCGCAGT.CCGA...........AAGGG.CGTGGGTTCGAATCCCAC.TCTTGTCA tRNA-Leu-CAG-1-1 Sc: 61.9 GGCAAGATGGCCGAGC.GGTctA.AGGCGCTGTGTTCAGGttacaatcgcaagattactaaaa.........................TCGCAGT.CCGA...........AAGGG.CGTGGGTTCGAATCCCAC.TCTTGTCA tRNA-Leu-CAG-2-1 Sc: 59.0 >>>>>>>..>>>>...........<<<<.>>>>>.......................................................<<<<<..>>>>...........<<<<...>>>>>.......<<<<<.<<<<<<<. GGGAGTCTGGCCGAGT.GGTt.A.TGGCGTTGTGTTTAGGtcatcccttaattgggtgtcattcttgaa...................CCGCAAT.GGGTA.........CGCCCG.CGCAGGTTCGATCCCTGC.GGCTCCCA tRNA-Leu-TAG-1-1 Sc: 57.5 >>>>>>>..>>>>...........<<<<.>>>>>.......................................................<<<<<..>>...............<<...>>>>>.......<<<<<.<<<<<<<. GGTAAGGTGGCCGAGC.GGTt.A.TGGCGTCAGGTTCAAGggaaaccttccacccttctccagagagtggcaaa..............TTCTGATGGGGA...........AACCTtCCAGGGTTCGAATCCCTG.TCTTACCA tRNA-Leu-CAA-1-1 Sc: 48.8 >>>>>>>..>>>>...........<<<<.>>>>>.......................................................<<<<<..>>>.............<<<...>>>>>.......<<<<<.<<<<<<<. AGCGGGTTGGTGGAGT.GGTctA.TCACGTGTGACTTAAGacaccgcaaggacaaagcgattttcggatcgcttaacctttgcaaggtTTCACAT.CTCGC.........AAGAGG.CGCGGGTTCGAACCCCGC.ACCCGCTA tRNA-Leu-TAA-1-1 Sc: 61.8 >>>>>>>..>>>.............<<<.>>>>>.......................................................<<<<<..>>>.............<<<...>>>>>.......<<<<<.<<<<<<<. GCAGATATGGCCGAGT.GGTt.A.AGGCGATGGTCTTAAGaaaaacctcttaagct................................CACCATT.ATCGA.........AAGATG.CAAGGGTTCGAACCCCTT.TGTCTGCA tRNA-Leu-TAA-2-1 Sc: 61.1 >>>>.>>..>>>.............<<<.>>>>>.......................................................<<<<<..>>...............<<...>>>>>.......<<<<<.<<.<<<<. GTCCAAGTGGTGAAATTGGTa.A.ACACAACGAACTTAAG................................................CTTCGTTGACA..TTT........AGTCtTGGAGGTTCGAGTCCTTC.CTCGGACA tRNA-Leu-TAA-3-1 Sc: 44.6
Lys tRNAs
>>>>>>>..>>>>..........<<<<.>>.>>>................................................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GCCCGGTTAGCTCAATCGGT.A.GAGCGTG.AGACTCTTAcgagttaacgca.............................................................ATCTCAAG...........GtTGCGGGTTCGACCCCCGCATCGGGCT tRNA-Lys-CTT-2-1 Sc: 78.2 GCCCGGTTAGCTCAATCGGT.A.GAGCGTG.AGACTCTTAagagtacgca...............................................................ATCTCAAG...........GtTGCGGGTTCGACCCCCGCATTGGGCT tRNA-Lys-CTT-1-3 Sc: 77.1 GCCCGGTTAGCTCAATCGGT.A.GAGCGTG.AGACTCTTAcagagtacgca..............................................................ATCTCAAG...........GtTGCGGGTTCGACCCCCGCATTGGGCT tRNA-Lys-CTT-1-1 Sc: 77.0 GCCCGGTTAGCTCAATCGGT.A.GAGCGTG.AGACTCTTAaacgagtacgca.............................................................ATCTCAAG...........GtTGCGGGTTCGACCCCCGCATTGGGCT tRNA-Lys-CTT-1-2 Sc: 77.0 >>>>>>>..>>>>..........<<<<.>>.>>..................................................................................<<<<................>>>>>.......<<<<<<<<<<<<. AGCCCGTTAGCTCAGT.GGT.A.GAGCGTG.TCCCTCTTCctctctcttccgctacctaaaattctaaatcttctttccgctccgcccctaaaatcc................ATGGCAAG...........G.CGCTGGTTCGATTCCAGCACGGGCTA tRNA-Lys-CTT-3-1 Sc: 55.6 >>>>>>>..>>>>..........<<<<.>>.>>>................................................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GCCCGGTTAGCTCAATCGGT.A.GAGCGTG.AGACTTTTAcgaaaggattcgcg...........................................................ATCTCAAG...........GcTGCGGGTTCGACCCCCGCATCGGGCA tRNA-Lys-TTT-1-1 Sc: 80.1 >>>>.>>..>>>>..........<<<<.>>.>>>................................................................................<<<<<................>>>>>.......<<<<<<<.<<<<. GCCCCGTTAGCTCAGT.GGT.A.GAGCGTGtCCATGTTTCtctctctcttccgtctcctgaaacctaaactcttctttccgctccgctctcccctatactcctaaaatctcacATGGCAAG...........A.CACTGGTTCGATTCCAGTACAGGGCA tRNA-Lys-TTT-2-1 Sc: 45.3 >>>>>>>..>>>>..........<<<<..>.>>>................................................................................<<<<.................>>>>>.......<<<<<<<<<<<<. GGGATTTTAGTATAAT.GGTgA.ATGCATA.GGACTTTTA.........................................................................ATCCTCAA...........AaTATAGGTTCGAATCCTGTAAGTCTCA tRNA-Lys-TTT-3-1 Sc: 42.1
Met tRNAs
>>>>>>>..>>>>...........<<<<.>>>>.............................................................<<<<..................>>>.>>.......<<<<<.<<<<<<<. GTCTTGGTGGCTCAGTTGGTt.A.GAGCGTTGGTCTCATAacaagcatgattcaatcatagattgggcc.......................ATCCAAAG.............GtCGTG.AGTTCGAGTCTCAC.CCAGGACA tRNA-Met-CAT-1-1 Sc: 80.3 GTCTTGGTGGCTCAGTTGGTttA.GAGCGTTGGTCTCATAcaaacatgattcaatcacaggttgggcc........................ATCCAAAG.............GtCGTG.AGTTCGAGTCTCAC.CCAGGACA tRNA-Met-CAT-2-1 Sc: 78.7 >>>>>>>..>>>>...........<<<<.>>>>>...........................................................<<<<<..................>>>.>>.......<<<<<.<<<<<<<. AGCAATTTGGCGCAGT.GGA..A.GCGCGCCGGGCTCATA....................................................ACCCGGAG.............GtCGCC.TGATCGAAACGGGC.AATTGCTA tRNA-iMet-CAT-1-1 Sc: 58.9 >>>>>....>>>>...........<<<<.>>>>>...........................................................<<<<<..................>>>.>>.......<<<<<...<<<<<. GCCTATTTAGTTTAAC.GGTt.A.AAACCTTAATTTCATA....................................................CATTAAAG.............A.TGAG.AGTTCAATTCTCTC.TTTAGGCT tRNA-Met-CAT-3-1 Sc: 40.1 >>>>>>>..>>>>...........<<<<.>>>>>...........................................................<<<<<..................>.>.>>.......<<<.<.<<<<<<<. AGGGTTATAGCTTAATCGGT..A.AAGCATACTGCTCATG....................................................ACAGTAC.TT...........A.TATG.TGTTCAAGTCACTT.TAGCCCTA tRNA-Met-CAT-5-1 Sc: 33.0 >>>>>>>..>>>>...........<<<<..>..>...........................................................<..<...................>>>.>>.......<<<<<.<<<<<<<. AGCAAGGTGGCGCAGT.GGA..A.GCGCGGTAAGTTGCTGtgactcacgatgatataacactttactaactaccaatcaagccgggctcataACCCGGAG.............GaCGAC.GGATCGAAACTGTC.TCTTGCTA tRNA-iMet-CAT-2-1 Sc: 26.4 .>>>>>>..>>>>...........<<<<.>>>>>...........................................................<<<<<..................>.>.>>.......<<<.<.<<<<<<.. AGCGGGTTAGTGTAAT.AGTa.A.ACATATTCGGCTCATG....................................................ATCGAAAG.............AtAGCGaGGTGCAAGTCCCCT.ACCCGCGT tRNA-Met-CAT-4-1 Sc: 22.7
Phe tRNAs
>>>>>>>..>>>>..........<.<<<.>>>>>.................................<<<<<................>>>>>.......<<<<<<<<<<<<. ACTTATGTAGCTTAAC.GGGtA.G.AGCGAAACATTAAAG..........................CTGTTTAA...........GgTATAGGTTCAAATCTTATCATAAGTT tRNA-Phe-AAA-1-1 Sc: 43.8 >>>>>>>..>>>>..........<.<<<.>>>>>.................................<<<<<................>>>>>.......<<<<<<<<<<<<. GCTTCTGTAGCTCAAC.GGT.A.G.AGCGAAACATTGAAG..........................CTGTTTAG...........GtTATAAGTTCAAATCTTATCGGGAGCA tRNA-Phe-GAA-2-1 Sc: 64.9 GCGGCAATAGCTCAGCTGGG.A.GtAGCGTTAGACTGAAGcgaaacttcagaaaccatcacggaatATCTAAAG...........GtCCTGCGTTCAATCCGCAGTTGCCGCA tRNA-Phe-GAA-1-1 Sc: 63.2 GCGGCAATAGCTCAGCTGGG.A.GtAGCGTTAGACTGAAGccaaacttcagacaccgtcattggatATCTAAAG...........GtCCTGCGTTCAATCCGCAGTTGCCGCA tRNA-Phe-GAA-1-2 Sc: 63.2 GCGGCAATAGCTCAGCTGGG.A.GtAGCGTTAGACTGAAGcgaaacttcagacaccatcacggaatATCTAAAG...........GtCCTGCGTTCAATCCGCAGTTGCCGCA tRNA-Phe-GAA-1-3 Sc: 63.2
Pro tRNAs
>>>>>>>..>>>..........<<<.>>>>>....................................<<<<<..................>>>>>.......<<<<<.<<<<<<<. GGTCTGGTGGTCTAGTGGTA.TGATTCTCGCTTAGGGacaaccctgaagcaatagcc.........TGCGAGAG.............GtCCCGTGTTCAATCCACGG.CCAGACCC tRNA-Pro-AGG-1-1 Sc: 61.7 GGTCTGGTGGTCTAGTGGTA.TGATTCTCGCTTAGGGacaaccctgaagcaatagcc.........TGCGAGAG.............GtCCCGTGTTCAATCCACGG.CCAGACCC tRNA-Pro-AGG-1-2 Sc: 61.7 GGTCTGGTGGTCTAGTGGTA.TGATTCTCGCTTAGGGacaaccctgaagcaacagtc.........TGCGAGAG.............GtCCCGTGTTCAATCCACGG.CCAGACCC tRNA-Pro-AGG-1-3 Sc: 61.7 GGTCTGGTGGTCTAGTGGTA.TGATTCTCGCTTAGGGacaaccctgaagcattagcc.........TGCGAGAG.............GtCCCGTGTTCAATCCACGG.CCAGACCC tRNA-Pro-AGG-1-4 Sc: 61.7 >>>>>.>..>>>..........<<<.>>>>>....................................<<<<<..................>>>>>.......<<<<<.<.<<<<<. GGCCATGTGGTCTAGTGGTC.TGATGTTTGCTTCGGGagattctcggatatcaaagatatcaccttTGCAAGAG.............GtCCTGGGTTCGAGTCCCAG.CTTGGCCC tRNA-Pro-CGG-1-1 Sc: 58.3 >>>>>.>..>>>..........<<<.>>>>>....................................<<<<<..................>>>>>.......<<<<<.<.<<<<<. GGCCGTGTGGTCTAGTCGTA.TGATACTCGCTTTGGGacaattccttgac................TGTGAGTG.............GtCCAGGGTTCAATTCCCTG.CTCGGCCC tRNA-Pro-TGG-1-1 Sc: 48.9 >>>>>>>..>>>..........<<<.>>>>>....................................<<<<<..................>>>>>.......<<<<<.<<<<<<<. CAGATTATGGCCGAATGGTA.AGGTGCCCTGTTTGGG.............................ACAGGGA.CT...........A.TATGAGTTCGAATCTTAT.TGATCTGA tRNA-Pro-TGG-2-1 Sc: 39.8
SeC tRNAs
Ser tRNAs
>>>>>>>..>>>...........<<.<.>>>>>.................................................................<<<<<..>.>>>.........<<<<...>>>>>.......<<<<<.<<<<<<<. GGCAAAGTGCCAGAGTGGTtA.ATG.GGTATGACTAGAA..........................................................ATCATAT.G.GCCTC.......GGCCG.CACAGGTTCGAATCCTGT.CTTTGTCG tRNA-Ser-AGA-1-1 Sc: 73.5 GGCAAAGTGCCAGAGTGGTtA.ATG.GGTATGACTAGAA..........................................................ATCATAT.G.GCTTC.......GGCCG.CGTAGGTTCAAATCCTGC.CTTTGTCG tRNA-Ser-AGA-2-1 Sc: 68.5 GGCAGAGTGCCAGAGTGGTtA.ATG.GGTATGACTAGAA..........................................................ATCATAT.G.GCTTC.......GGCCG.CATAGGTTCAAATCCTGT.CTCTGTCG tRNA-Ser-AGA-3-1 Sc: 67.1 >>>>>>>..>>>...........<<.<.>>>>>.................................................................<<<<<..>..>>.........<<.<...>>>>>.......<<<<<.<<<<<<<. GGCAACGTGCCAGAGTGGTtA.ATG.GGTACCCCTCGAA..........................................................AGGGTATGGcTTC.........GGTCG.CACAGGTTCGAATCCTGT.CGTTGTCG tRNA-Ser-CGA-2-1 Sc: 60.0 GGCAACATGCCAGAGTGGTtA.ATG.GGTATGATTCGAAtgtacatggcaggtcttagggcttgtcacattgaggata...................ATCATATGGcTTC.........GGTCG.CGCAGGTTCGAATCCTGC.TGTTGTCG tRNA-Ser-CGA-1-1 Sc: 56.7 >>>>.>>..>>>>.........<<<.<..>>>>.................................................................<<<<........................>>>>>.......<<<<<.<<.<<<<. GCCCTGGTAGCACAGTGGT.A.GTGgTAAGTCAATCATCcgcctcgtggtagatccacactaacaagaagcagcgtgtcactcgtagcaatgagtcaATGACAAG..................GtCGTCTGTTCGATCCAGGC.CCCGGGCA tRNA-Ser-CGA-3-1 Sc: 28.4 >>>>>>>..>>>...........<<.<.>>>>>.................................................................<<<<<..>.>>...........<<<...>>>>>.......<<<<<.<<<<<<<. GACAAAGTGGCCGAGTGGTtA.AGG.CGTAACACTTGAAtcgtcaagta................................................ATGTTATGG.GTT.........CGCCCtCGCAAGTTCGAATCTTGT.CTTTGTCG tRNA-Ser-TGA-1-1 Sc: 59.4 >>>>>>>..>>>...........<<.<.>>>>>.................................................................<<<<<..>.>>>.........<<<<...>>>>>.......<<<<<.<<<<<<<. GACGGGATGGCCGAGTGGTtA.AGG.CGATGCCCTGCTAataattagcaagag............................................AGGCATT.G.GGTTC.......GCCCG.CGCGTGTTCGAATCACGT.TTCCGTCG tRNA-Ser-GCT-1-1 Sc: 64.9 GACGGGATGGCCGAGTGGTtA.AGG.CGATGCCCTGCTAgtatctagcgagag............................................AGGCATT.G.GGTTC.......GCCCG.CGCGTGTTCGAATCACGT.TTCCGTCG tRNA-Ser-GCT-1-2 Sc: 64.9
Sup tRNAs
Thr tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......................................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GCCCCGTTGGCTAAGTGGT.A.TAGCGTGTCACTAGTA................................................................ATGACAAG...........AtCACTGGTTCGATTCCAGTACGGGGCA tRNA-Thr-AGT-1-1 Sc: 76.7 GCCCCGTTGGCTAAGTGGT.A.TAGCGTGTCACTAGTA................................................................ATGACAAG...........AtCACTGGTTCGATTCCAGTACGGGGCA tRNA-Thr-AGT-1-2 Sc: 76.7 GCCCCGTTGGCTAAGTGGT.A.TAGCGTGTCACTAGTAatctccaaacaccgcttggtgtcccaaaggttgatgatgatgat....................ATGACAAG...........AtCACTGGTTCGATTCCAGTACGGGGCA tRNA-Thr-AGT-1-3 Sc: 68.1 >>>>>>>..>>>>.........<<<<.>>>>>.......................................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GCCCCTATAGCTCAGTGGT.A.GAGCGTTATACTTGTAtccactgcaagatc..................................................ATATAAAG...........GtCCGTAGTTCAAACCTGCGTGGGGGCT tRNA-Thr-TGT-1-1 Sc: 69.4 >>>>.>>..>>>...........<<<.>>>>>.......................................................................<<<<<................>>>>>.......<<<<<<<.<<<<. GGTCTGGTAGTGTAGGGGTgA.TCACATTCGGTTTGTAcgtgtcccgtcacactaattccaattgagtgccactaacccctctcagtgatataaactcaactTCCGAATA...........A.CCTGAGTTCGAATCTCAGCCTGACCT tRNA-Thr-TGT-2-1 Sc: 53.1
Trp tRNAs
>>>>>>>..>>>>........<<<<...........>>>>................................................<<<<................>>>>>.......<<<<<<<<<<<<. GGGGGGCTGGCGCAACGGTA.GCGCG..........TCAGATTCCAGattggaatc..............................TCCTGAAG...........GtTACCGGTTCAAATCCGGTGTCCCTCA tRNA-Trp-CCA-1-1 Sc: 56.7 >>>>>>>..>>>..........<<<...........>>..>..............................................<..<<................>>>>>.......<<<<<<<<<<<<. GGGGTGGTGGCGCAACGGGT.ACGTTacacacaagtTTCAGTCACAActcctcctgactctattatagtagcgcgttggattccagACCCAAAG...........GtTGCGTGTTCAAATCACGTCCGCCTCA tRNA-Trp-CCA-2-1 Sc: 32.2
Tyr tRNAs
>>>>>>>..>>>...........<<<.>>>>>....................<<<<<................>>>>>.......<<<<<<<<<<<<. CTCCTTGTGGTGTAGTGGCtA.TCACGTCGGGCTGTAActgtactttgcaaACCTGAAG...........GtCACCGGCTCGATTCCGGTCGGGGAGA tRNA-Tyr-GTA-1-1 Sc: 51.5
Val tRNAs
>>>>>>>..>>>............<<<......>>>>>.............................................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGTTCCGTGGTCTAGCTGGTtA.TGGCA.....TCTCGTTAACA......................................................................CCGAGAAG...........GtCCCCGGTTCGAGCCCGGGCGGAATCA tRNA-Val-AAC-1-1 Sc: 69.8 GGTTCCGTGGTCTAGCTGGTtA.TGGCA.....TCTCGTTAACA......................................................................CCGAGAAG...........GtCCCCGGTTCGAGCCCGGGCGGAATCA tRNA-Val-AAC-1-2 Sc: 69.8 GGTTCCGTGGTCTAGCTGGTtA.TGGCA.....TCTCGTTAACA......................................................................CCGAGAAG...........GtCCCCGGTTCGAGCCCGGGCGGAATCA tRNA-Val-AAC-1-3 Sc: 69.8 GGTTCCGTGGTCTAGCTGGTtA.TGGCA.....TCTCGTTAACA......................................................................CCGAGAAG...........GtCCCCGGTTCGAGCCCGGGCGGAATCA tRNA-Val-AAC-1-4 Sc: 69.8 >>>>>>>..>>>............<<<......>>>>>.............................................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGTTTCGTGGTCTAGTTGGTcA.TGGCA.....TCTCGCTCACA......................................................................CCGAGAAG...........GtCCCCGGTTCGAGCCCGGGCGGAACCA tRNA-Val-CAC-1-1 Sc: 73.1 GCGGGGCTGGTGTAGT.GGTtA.TCACG.....TGTCGTTCACAaagatgagcatttc........................................................CCGACAAG...........GtCGCGAGTTCGATCCTCGCGCCCCGTA tRNA-Val-CAC-2-1 Sc: 64.6 >>>>>>>..>>.>..........<.<<......>>.>>.............................................................................<<.<<................>>>>>.......<<<<<<<<<<<<. GGTTCCATGGCTCAGTTGGTtA.GCGCGgtatgTTTCATTCACAgatcgcataggatcaaccagtcactaatatggaactcagtcgtactaatattcaatcgaaatattgagtaATGCGAAG...........GtCGAGAGTTCGACCCTCTCTGGGACCA tRNA-Val-CAC-3-1 Sc: 38.2 >>>>>>>..>>>>..........<<<<......>>>>>.............................................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GACCGTGTGGCCAAGT.GGCtA.TGGCG.....TTGGTTTTACAttaccaagtagaaa........................................................CACCAAAG...........AtCGCAAGTTCGAACCTTGCCACGGTCA tRNA-Val-TAC-1-1 Sc: 58.1 GGGTAATTAATTCAAC.GGC.A.GAATA.....TTTGTTTTACA......................................................................CACGAAAG...........GtTAGAGGTTCAAATCCTTTATTACTCA tRNA-Val-TAC-2-1 Sc: 45.2