Structurally Aligned tRNAs (by Isotype & Anticodon)

Structural alignments are generated by aligning tRNA sequences against domain-specific tRNA covariance models with the use of COVE.

Ala tRNAs
>>>>>>>..>>>>........<<<<.>>>>>..................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGGCGCTTGGCTTAGTGGTA.AAGCGCTCCCTTAGCAtgttctaatcatc..............TGGGAGAG...........GtCCAGGGTTCGATTCCCTGAGTGTCCA tRNA-Ala-AGC-1-4 Sc: 67.7 GGGCGCTTGGCTTAGTGGTA.AAGCGCTCCCTTAGCAagttccgagcaatcggccttcatc...TGGGAGAG...........GtCCAGGGTTCGATTCCCTGAGTGTCCA tRNA-Ala-AGC-1-1 Sc: 67.2 GGGCGCTTGGCTTAGTGGTA.AAGCGCTCCCTTAGCAtactttcttcgtccaagtaggctctc.TGGGAGAG...........GtCCAGGGTTCGATTCCCTGAGTGTCCA tRNA-Ala-AGC-1-3 Sc: 67.2 GGGCGCTTGGCTTAGTGGTA.AAGCGCTCCCTTAGCAtgtttcgagctatctcgagcatttgtaTGGGAGAG...........GtCCAGGGTTCGATTCCCTGAGTGTCCA tRNA-Ala-AGC-1-2 Sc: 67.1 >>>>>>>..>>>..........<<<.>>>>>..................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGGCGGGTGGTCTAGTGGTA.TGATTTTCCCTTAGCAtgttccaagcaattggtcttctc....TGGGAGAG...........GtCCGGGGTTCAATTCCCCGTCTGTCCA tRNA-Ala-AGC-2-1 Sc: 59.0 >>>>>.>..>>>..........<<<.>>>>>..................................<<<<<................>>>>>.......<<<<<<.<<<<<. GGGCGTGTGGTCTAGTGGTA.TGACGTCGGCTTCGCAtttccgatcatctgatacacgtgcgtcTGCTGAAG...........GtCCGGAGTTCGATTCTCCGTTCGTCCA tRNA-Ala-CGC-1-1 Sc: 59.1 >>>>>>>..>>>>........<<<<..>>>>..................................<<<<.................>>>>>.......<<<<<<<<<<<<. GGGGATATGGCGCAGTGGTA.GCGCGCTTGCTTTGCA...........................TGCAATAG...........GtCGGGGGTTCAAGTCCCTCTATCTCCA tRNA-Ala-TGC-1-1 Sc: 69.0 >>>>>>>..>>>>........<<<<.>>>>>..................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGGGATATAATTCAATGGTA.GAATACTGACTTTGCA...........................CGTCAGTA...........G.TCTAAGTTCGAGTCTTAGTATCTCCA tRNA-Ala-TGC-2-1 Sc: 54.0
Arg tRNAs
>>>>>>>..>>>...........<<<.>>.>>>..............................................................................<<<<<................>>>>>.......<<<<<<<<<<<..<. GGTCGCATGGCCCAATGGC.A.AGGCGTC.TGAC.TACGA....................................................................A..TCAGGAG...........AtTGTGGGTTCGATCCCCACTGTGAC..CT tRNA-Arg-ACG-1-1 Sc: 72.8 GGTCGCATGGCCCAATGGC.A.AGGCGTC.TGAC.TACGA....................................................................A..TCAGGAG...........AtTGTGGGTTCGATCCCCACTGTGAC..CT tRNA-Arg-ACG-1-2 Sc: 72.8 GGTCGCATGGCCCAATGGC.A.AGGCGTC.TGAC.TACGA....................................................................A..TCAGGAG...........AtTGTGGGTTCGATCCCCACTGTGAC..CT tRNA-Arg-ACG-1-3 Sc: 72.8 >>>>>>>..>>>>.........<<<<.>>.>>>..............................................................................<<<<<................>>>>>.......<<<<<<<<<<<..<. GGAGCACTGGCGCAATGGC.C.GCGCGTC.GGTT.TCCGG....................................................................T..ACCGAAG...........GtTCCAGGTTCGAGCCCTGGGTGCTT..CG tRNA-Arg-CCG-1-1 Sc: 60.3 >>>>>>>..>>>>.........<<<<.>>.>>>..............................................................................<<<<<................>>>>>.......<<<<<<<<<<<..<. GGCCGCGTGGCCTAATGGCtA.AGGCGCT.AGAT.TTCGGtcttctaaaat.........................................................C..TCTAGAG...........AtTCCAGGTTCGACTCCTGGCGTGGT..CG tRNA-Arg-TCG-1-2 Sc: 59.3 GGCCGCGTGGCCTAATGGCtA.AGGCGCT.AGAT.TTCGGttaacatacgataat.....................................................C..TCTAGAG...........AtTCCAGGTTCGACTCCTGGCGTGGT..CG tRNA-Arg-TCG-1-1 Sc: 59.2 >>>>>>>..>>>>.........<<<<.>>.>>>..............................................................................<<<<<................>>>>>.......<<<<<<<<<<<..<. GGCGTGCTGGCGCAATGGG.A.GCGCGTA.GTCC.TCCTAagcatctgca..........................................................A..GACTAAG...........GtTGAGGGTTCGAGTCCCTCGTACGT..CG tRNA-Arg-CCT-1-1 Sc: 59.9 >>>>>>>..>>>>.........<<<<.>>.>>>..............................................................................<<<<<................>>>>>.......<<<<<<<<<<<..<. GCCCCGTTAGCTCAGTGGTcA.GAGCGTG.TCACgTCTTGtctcttctctctacctaaacctaaaatcttctttcactccgactccgttcctatatacctaaaatcttC..TGGCAAG...........A.TACTGGTTCGAATCCAGTACGGGG..CA tRNA-Arg-TCT-2-1 Sc: 52.9 GCCTCGTTAGCTCAGTGGC.A.GAGCGTGtCCAT.CTCTTccttccgtctcctataaacttctctcctttccgctccattcctataacctaaactctca.........A..TGGCAAG...........G.CACTGGTTCGATTCCAGTACGGGG..CA tRNA-Arg-TCT-3-1 Sc: 51.1 TTCTTATTAGCTCAATGGT.A.GAGCATA.ATAC.TTCTA....................................................................A..TATTATG...........A.TTTTGGTTCGACTCCAGAATAAGAttAA tRNA-Arg-TCT-1-1 Sc: 47.2 >>>>>>>..>>>...........<<<.>>.>>................................................................................<<<<................>>>>>.......<<<<<<<<<<<..<. GCTCCGTTAGCTCAATGGT.A.AAGCGTG.TC....CATAtctttatctctctctcttccgtatcctaaaacctaaaatattctttcagctccattcctagaactct.A..TGGCAAG...........A.TACTGGTTCAAATCCAGTACGGAG..CA tRNA-Arg-TCT-4-1 Sc: 40.3
Asn tRNAs
>>>>>>>..>>>>..........<<<<..>>>>>...........................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GTTTTTATAGCTCAAT.GGT.A.GAGCAaGGATACTATTA....................................................ATATTCTG...........G.TAGATGTTCGATTCATCTTAGAAGCT tRNA-Asn-ATT-1-1 Sc: 40.3 >>>>>>>..>>>>..........<<<<..>>>>>...........................................................<<<<<................>>>>>.......<<<<<<<<<<<<. TCCGCCATGGCGCAATTGGTtA.GCGCG.TCTGACTGTTA....................................................ATCAGGAG...........GcTGTAAGTTCGAGTCTTACTGGCGGAG tRNA-Asn-GTT-1-1 Sc: 80.7 TCCGCCATGGCGCAATTGGCtA.GCGCG.TCTGACTGTTA....................................................ATCAGGAG...........GcTGTAAGTTCGAGTCTTACTGGCGGAG tRNA-Asn-GTT-2-1 Sc: 76.3 GCCCCTGTAGCGCAAT.GGT.A.GCGCG.TGAGACTGTTCgtacccccttggtcctcgatttcccattctttactaacaaagctgtagtctaATCTCAAG...........GtTGCGGGTTCGAGCCCCGCCAGGGGTT tRNA-Asn-GTT-3-1 Sc: 70.1 GTTTCTATAGCTCAAC.GGT.A.GAGCA.TGATACTGTTA....................................................ATATTATG...........A.TAGATGTTCGATTCATCTTAGAAGCT tRNA-Asn-GTT-4-1 Sc: 49.4
Asp tRNAs
>>>>>>>..>>>>...........<<<<....>>>>>..............................................................<<<<<....................>>>>>.......<<<<<<<<<<<<. TCTTCCGTAGTATAGT..GGTcA.GTATG...CAAGCTTGTCA.......................................................CGCTTGAG...............A.CCCGGGTTCAATTCCCGGCGGGAGAG tRNA-Asp-GTC-1-1 Sc: 69.5 TCTTCCGTAGTATAGT..GGTcA.GTATG...CAAGCTTGTCA.......................................................CGCTTGAG...............A.CCCGGGTTCAATTCCCGGCGGGAGAG tRNA-Asp-GTC-1-2 Sc: 69.5 TCTTCCGTAGTATAGT..GGTcA.GTATG...CAAGCTTGTCA.......................................................CGCTTGAG...............A.CCCGGGTTCAATTCCCGGCGGGAGAG tRNA-Asp-GTC-1-3 Sc: 69.5 TCTTCCGTAGTATAGT..GGTcA.GTATG...CAAGCTTGTCA.......................................................CGCTTGAG...............A.CCCGGGTTCAATTCCCGGCGGGAGAG tRNA-Asp-GTC-1-4 Sc: 69.5 >>>>>>>...>>>...........<<<.....>>>>>..............................................................<<<<<....................>>>>>.......<<<<<<<<<<<<. GAATTAGTAACTTAATTaGGT.A.AAGGA...TTTCCTTGTCA.......................................................CGGAAATA...............GaTGTCGGTTCGATTCTGATTTAATTCG tRNA-Asp-GTC-2-1 Sc: 26.4 .>>>>>>..>.>>...........<<.<....>..>>..............................................................<<..<..>..>.......<..<...>>>>>.......<<<<<<<<<<<.. GCCGAACTGGCGTAATT.GGT.A.GCACA...GTTGGGTGTCAcctaggagatagatctgctagg.................................CCCTTCGGGGGG.......CGACGgTCTTGGTTCGAGTCCAAGGTTTGGAA tRNA-Asp-GTC-4-1 Sc: 24.6 >>>>>>>..>>>>...........<<<<....>..>................................................................<..<....................>>>>>.......<<<<<<<<<<<<. AGCAAGGTGGCGCAGT..GGA.A.GCGCGgtaCGTGTTTGTCAaagctcttcttttataccaacatttcgactaactccctatccagccgggctcataACCCGGAG...............GaCGACGGATCGAAACTGTCTCTTGCTA tRNA-Asp-GTC-3-1 Sc: 24.4
Cys tRNAs
>>>>>>>..>>>>........<<<<.>>>>>....................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGTCTGGTAGCTCAGGGGTA.GAGCGAGCGCCTGCAG.............................AGCGCTAG...........GtCACGCGTTCAAATCGCGTTCAGACCT tRNA-Cys-GCA-2-1 Sc: 71.0 >>>>>>>..>>>>........<<<<..>>>>....................................<<<<.................>>>>>.......<<<<<<<<<<<<. GCTCGGATAGCTCAGCGGTA.GAGCGGCAGATTGCAGctgaggtgtgacagcaccaacaatcagtcATCTGATG...........GtCCCTGGTTCAATCCCGGGTTCGAGCT tRNA-Cys-GCA-1-1 Sc: 66.7
Gln tRNAs
>>>>>>>..>>>...........<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<. GCTTGCATGGTCTAATGGTtA.TGACTCCAGATTCTGATTCTGGCA...........GCGGCGGTTCGATTCCGCCTGTGAGCT tRNA-Gln-CTG-2-1 Sc: 66.0 GGTTCCATGGTCTAACGGTcA.TGACTCCAGATTCTGATTCTGGCA...........GCGAGGGTTCGACTCCCTCTGGGACCT tRNA-Gln-CTG-1-1 Sc: 62.8 GGTTTCATGGTCTAACGGTcA.TGACTCCAGATTCTGATTCTGGCA...........GCGAGGGTTCGACTCCCTCTGAGACCT tRNA-Gln-CTG-3-1 Sc: 62.6 >>.>>>>..>>>>.........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<.<<. GGCCCATTCATCTAGTGGTtA.GGATGCTGGGTTTTGATTCCAGAA...........ACGTCAGTTCGAATCTGGCATGGACCT tRNA-Gln-TTG-1-1 Sc: 45.3
Glu tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>..........................................................................................<<<<<............................>>>>>.......<<<<<<<<<<..<<. TCCGGTATGGTGTAGTGGCtA.ACATCGCTCGCTCTCAtcaaagaa...........................................................................CCGAGCAG.......................C.CCAGGGTTCGATTCCCTGTACCG..GAG tRNA-Glu-CTC-1-2 Sc: 49.3 TCCGGTATGGTGTAGTGGCtA.ACATCGCTCGCTCTCAtagcgcagta.........................................................................CCGAGCAG.......................C.CCAGGGTTCGATTCCCTGTACCG..GAG tRNA-Glu-CTC-1-1 Sc: 49.2 TCCGGTATGGTGTAGTGGCtA.ACATCGCTCGCTCTCAattgagaagca........................................................................CCGAGCAG.......................C.CCAGGGTTCGATTCCCTGTACCG..GAG tRNA-Glu-CTC-1-3 Sc: 49.2 TCCGGTATGGTGTAGTGGCtA.ACATCGCTCGCTCTCActtcaatggat........................................................................CCGAGCAG.......................C.CCAGGGTTCGATTCCCTGTACCG..GAG tRNA-Glu-CTC-1-4 Sc: 49.2 >.>>>>>..>>>>.........<<<<.>>.>............................................................................................<.<<............................>>>>>.......<<<<<<<<<<...<. ACCCTGTTAGCTCAGTGGT.A.GAGCGTGGCCCTCTCCcctctcttccgctatctaaattcctaaatcttctttccgctccgatcctaggaacttg.........................ATGGCAAG.......................A.CGCTGGTTCGATTCCAGCACGGG..CTA tRNA-Glu-CTC-3-1 Sc: 43.2 >>.>.>>..>>>>.........<<<<.>>................................................................................................<<............................>>>>>.......<<<<<<<.<...<<. GCCCCGTTAGCTCAGTGGT.A.GAGCGTG...TCCATGtctctctctctttctttcttctgtctcctaaaacctaaactcttctttccgctccgctctcctctgtactcctaaaatctcacATTGCAAG.......................A.CACTGGTTCGATTCCAGTACAGA..GCA tRNA-Glu-CTC-4-1 Sc: 35.2 >>>>>>>..>>>>.........<<<<.>>.>>..........................................................................................<<.<<..>>>>>.........<..<<<..<...>>>>>.......<<<<<<<<<<..<<. TGCAAACTGGTGTAATGGT.A.GCATAATCGGTTCTCA...................................................................................CCCTGTAGGGCCCTTCGgg...G..GGCgaTGgTTCTGGTTCGAGTCCAGGGTTTGgaCAA tRNA-Glu-CTC-2-1 Sc: 27.3 >>>>>>>..>>>>.........<<<<.>>>>>..........................................................................................<<<<<............................>>>>>.......<<<<<<<<<<..<<. TCCGATGTGGTCTAACGGTtA.GGATAGTGCGCTTTCAatgggtccgccctggaagat...............................................................CCGCATTG.......................G.CCGGGGTTCGACTCCCCGCATCG..GAG tRNA-Glu-TTC-1-1 Sc: 56.8 >>>>>>>..>>>...........<<<.>>>>............................................................................................<<<<............................>>>>>.......<<<<<<<<<<..<<. GGACTAGTAGTCAAGTGGTtA.AGACATAGCCCTTTCA...................................................................................CAGCTATT.......................AcCGCAGGTTCGAAACCTGTCTAGT..CTA tRNA-Glu-TTC-2-1 Sc: 48.2
Gly tRNAs
>>>>>>>..>>>>.........<<<<.>>>>.>...........................................................<<<<<...............>>>>>.......<<<<<<<<<<<<. GCGTGAATGGTTTAGTGGT.A.AAATTCTCC.GTTGCCAtccgagcagcg.........................................TCGGGGAG...........CCCTGGGTTCGATTCCCAGTTCACGCA tRNA-Gly-GCC-1-3 Sc: 60.2 GCGTGAATGGTTTAGTGGT.A.AAATTCTCC.GTTGCCAtccgagcaacg.........................................TCGGGGAG...........CCCTGGGTTCGATTCCCAGTTCACGCA tRNA-Gly-GCC-1-1 Sc: 60.1 GCGTGAATGGTTTAGTGGT.A.AAATTCTCC.GTTGCCAtccgagcaacg.........................................TCGGGGAG...........CCCTGGGTTCGATTCCCAGTTCACGCA tRNA-Gly-GCC-1-2 Sc: 60.1 GCGTGAATGGTTTAGTGGT.A.AAATTCTCC.GTTGCCAtccgagcaacg.........................................TCGGGGAG...........CCCTGGGTTCGATTCCCAGTTCACGCA tRNA-Gly-GCC-1-4 Sc: 60.1 GCGTGAATGGTTTAGTGGT.A.AAATTCTCC.GTTGCCAtccgagcaacg.........................................TCGGGGAG...........CCCTGGGTTCGATTCCCAGTTCACGCA tRNA-Gly-GCC-1-5 Sc: 60.1 GCGTGATTGGTTTAGTGGT.A.AAATTCTCC.GTTGCCAtccgtgcagcg.........................................TCGGGGAG...........CCCTGGGTTCGATTCCCAGATCACGCA tRNA-Gly-GCC-2-1 Sc: 58.9 >>>>>>>..>>>>.........<<<<.>>>>.>...........................................................<<<<<...............>>>>>.......<<<<<<<<<<<<. GCGCGAGTAGTATAGTGGTtA.GTATGCGTG.CTTCCCAagtgcggaaat.........................................AGCACGAG...........AGCCGGGTTCGATTCCCGGCTCGCGCA tRNA-Gly-CCC-1-1 Sc: 63.8 GCAGGTATAAGTTAATGGT.A.GACTAGCTGaCTTCCCA....................................................TGCGGTAA...........GCGTCAGTTCGAATCTGGTTACCTGCA tRNA-Gly-CCC-2-1 Sc: 35.7 >>>>>>>..>>>>.........<<<<.>>>>.>...........................................................<<<<<...............>>>>>.......<<<<<<<<<<<<. GCTTACTTGGTCTAATGGTtA.GGATTACTG.CCTTCCA....................................................AGCAGTAG...........GTTCGAGTTCAATTCTCGGAGTAAGCA tRNA-Gly-TCC-1-1 Sc: 63.7 >>>>>>>..>>>>.........<<<<.>>.>.>...........................................................<<.<<...............>>>>>.......<<<<<<<<<<<<. GCGGGTATAAGTTAATGGT.A.GACTAGCTG.ACTTCCA....................................................ATCTGTAA...........GTGTCAGTTCAAATCTGACTACCCGTA tRNA-Gly-TCC-2-1 Sc: 47.7 >>>>>>>..>>.............<<...>>..............................................................<<.................>>>>>.......<<<<<<<<<<<<. GCTTACTTGGTCTAACGGTaA.TTACTACCG.AATTCCCcaggaattcatcacactctaactctcgttcaggttaggatccacgccttccaAGCGTGGG...........GTAAGGGTTCGACTCCCTTAGTAAGCA tRNA-Gly-TCC-3-1 Sc: 34.5
His tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>....................<<<<<................>>>>>.......<<<<<.<<<<<<<. GCCGCGATCGTCTAGT.GGTtA.GGACATTAGTTTGTGGaaaccaaactgtgCACTGAAA...........A.CGGCGGTTCGATTCCGCC.TCGTGGCA tRNA-His-GTG-1-1 Sc: 53.8 GCCGCAATCGTCTAGT.GGTtA.GGACATTAGTTTGTGGaaaccaaactgtgCACTGAAA...........A.CGGCGGTTCGATTCCGCC.TTGTGGCA tRNA-His-GTG-2-1 Sc: 52.4 >>>>>.>..>>>>..........<<<<.>>>>>....................<<<<<................>>>>>.......<<<<<.<.<<<<<. GTGAATATAGCTTAATCGGT.A.AAGTAACTATTTGTGG.............CATAGTC............GtTCCTGGTTCAAGTCCAGG.TTTTCACC tRNA-His-GTG-3-1 Sc: 42.1
Ile tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>............................<<<<<................>>>>>.......<<<<<<<<<<<<. GGTTCCATAGTTCAGTTGGTtA.GAGCATCGTACTAATAtagtaaccctatatctgta..ATGCGAAA...........GtCGTGAGTTCGAGCCTCACTGGGACCA tRNA-Ile-AAT-1-1 Sc: 66.7 >>>>>>>..>>>>..........<<<<.>>>>..............................<<<<................>>>>>.......<<<<<<<<<<<<. GGTCTCGTAGCGGAGT.GGTtA.CCGTTGTGTTCTTATActttcattatgattggaagctATGCATAG...........GtCGTGAGTTCGAACCTCACCGAGACCA tRNA-Ile-TAT-1-1 Sc: 59.7
Leu tRNAs
>>>>>>>..>>>>...........<<<<.>>>>>........................................................<<<<<..>>...............<<...>>>>>.......<<<<<.<<<<<<<. GGTGAGATGGCCGAGTTGGTt.A.TGGCGCCAGGTTAAGGttaccttaatagcatt.................................TCCTGGTGGGGC...........AACCCtCGTGGGTTCGAATCCCAC.TCTCATCA tRNA-Leu-AAG-1-1 Sc: 64.1 GGTGAGATGGCCGAGTTGGTt.A.TGGCGCCAGGTTAAGGttaccttaatagcgtt.................................TCCTGGTGGGGC...........AACCCtCGTGGGTTCAAATCCCAC.TCTCATCA tRNA-Leu-AAG-2-1 Sc: 63.1 GGTGAGATGGCCGAGTTGGTt.A.TGGCGCCAGGTTAAGGataccttaacatcgtt.................................TCCTGGTGGAGC...........AATCCtCATGGGTTCGAATCCCAT.TCTCATCA tRNA-Leu-AAG-3-1 Sc: 58.6 >>>>>>>..>>>.............<<<.>>>>>........................................................<<<<<..>>...............<<...>>>>>.......<<<<<.<<<<<<<. GGCAAGATGGCCGAGT.GGTctA.AGGCGCTGTGTTCAGGaagttggaaa.......................................TCGCAGT.CCGA...........AAGGG.CGTGGGTTCGAATCCCAC.TCTTGTCA tRNA-Leu-CAG-1-1 Sc: 61.9 GGCAAGATGGCCGAGC.GGTctA.AGGCGCTGTGTTCAGGttacaaccgcgaggttaccgaaaa.........................TCGCAGT.CCGA...........AAGGG.CGTGGGTTCGAATCCCAC.TCTTGTCA tRNA-Leu-CAG-2-1 Sc: 59.0 >>>>>>>..>>>>...........<<<<.>>>>>........................................................<<<<<..>>>>...........<<<<...>>>>>.......<<<<<.<<<<<<<. GGGAGTCTGGCCGAGT.GGTt.A.TGGCGTTGTGTTTAGGttatcccttaattgggtgttattcttgaa....................CCGCAAT.GGGTA.........CGCCCG.CGCAGGTTCGATCCCTGC.GGCTCCCA tRNA-Leu-TAG-1-1 Sc: 57.5 >>>>>>>..>>>>...........<<<<.>>>>>........................................................<<<<<..>>...............<<...>>>>>.......<<<<<.<<<<<<<. GGTAAGGTGGCCGAGC.GGTt.A.TGGCGTCAGGTTCAAGggaaaccttccacccttctccagagagtggcata...............TTCTGATGGGGA...........AACCTtCCAGGGTTCGAATCCCTG.TCTTACCA tRNA-Leu-CAA-1-1 Sc: 48.8 >>>>>>>..>>>>...........<<<<.>>>>>........................................................<<<<<..>>>.............<<<...>>>>>.......<<<<<.<<<<<<<. AGCGGGTTGGTGGAGT.GGTctA.TCACGTGTGACTTAAGataccataatcataacgcgattttcggatcgctttatctttgcaaaggtTTCACAT.CTCGC.........AAGAGG.CGCGGGTTCGAACCCCGC.ACCCGCTA tRNA-Leu-TAA-1-1 Sc: 61.7 >>>>>>>..>>>.............<<<.>>>>>........................................................<<<<<..>>>.............<<<...>>>>>.......<<<<<.<<<<<<<. GCAGATATGGCCGAGT.GGTt.A.AGGCGATGGTCTTAAGaaagtctcttaagtt..................................CACCATT.ATCGA.........AAGATG.CAAGGGTTCGAACCCCTT.TGTCTGCA tRNA-Leu-TAA-2-1 Sc: 61.1 >>>>.>>..>>>.............<<<.>>>>>........................................................<<<<<..>>...............<<...>>>>>.......<<<<<.<<.<<<<. GTCCAAGTGGTGAAATTGGTa.A.ACACAACGAACTTAAG.................................................CTTCGTTGACA..TTT........AGTCtTGGAGGTTCGAGTCCTTC.CTCGGACA tRNA-Leu-TAA-3-1 Sc: 44.6
Lys tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>...........................................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GCCCGGTTAGCTCAATCGGT.A.GAGCGTGAGACTCTTAcgagttaacgca........................................................ATCTCAAG...........GtTGCGGGTTCGACCCCCGCATCGGGCT tRNA-Lys-CTT-2-1 Sc: 78.2 GCCCGGTTAGCTCAATCGGT.A.GAGCGTGAGACTCTTAagagtacgca..........................................................ATCTCAAG...........GtTGCGGGTTCGACCCCCGCATTGGGCT tRNA-Lys-CTT-1-3 Sc: 77.1 GCCCGGTTAGCTCAATCGGT.A.GAGCGTGAGACTCTTAcagagtacgca.........................................................ATCTCAAG...........GtTGCGGGTTCGACCCCCGCATTGGGCT tRNA-Lys-CTT-1-1 Sc: 77.0 GCCCGGTTAGCTCAATCGGT.A.GAGCGTGAGACTCTTAaaagagtacgca........................................................ATCTCAAG...........GtTGCGGGTTCGACCCCCGCATTGGGCT tRNA-Lys-CTT-1-2 Sc: 77.0 >>>>>>>..>>>>..........<<<<.>>>>>...........................................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GCCCGGTTAGCTCAATCGGT.A.GAGCGTGAGACTTTTAcgaaaggattcgcg......................................................ATCTCAAG...........GcTGCGGGTTCGACCCCCGCATCGGGCA tRNA-Lys-TTT-1-1 Sc: 80.1 >>>>>>>..>>>>..........<<<<.>>>>.............................................................................<<<<................>>>>>.......<<<<<<<<<<<<. GCCCCGTTAGCTCAGT.GGC.A.GAGCGTGCTCGTCTTTtctctctcttcctccctaaaccctaaaatctcttccactccgtctccgttcctttgtacctaaactctTCGGCAAG...........G.CGCTGGTTCGATTCCAGCACGGGGCA tRNA-Lys-TTT-2-1 Sc: 54.1 >>>>>>>..>>>>..........<<<<..>>>>...........................................................................<<<<.................>>>>>.......<<<<<<<<<<<<. GGGATTTTAGTATAAT.GGTgA.ATGCATAGGACTTTTA....................................................................ATCCTCAA...........AaTATAGGTTCGAATCCTGTAAGTCTCA tRNA-Lys-TTT-3-1 Sc: 42.1
Met tRNAs
>>>>>>>..>>>>..........<<<<..>>>>.............................................................<<<<.....................>>>.>>.......<<<<<.<<<<<<<. GTCTTGGTGGCTCAGTTGGTtA.GAGCG.TTGGTCTCATAcgaacatgattcaatcatagattgggcc........................ATCCAAAG................GtCGTG.AGTTCGAGTCTCAC.CCAGGACA tRNA-Met-CAT-1-1 Sc: 80.3 GTCTTGGTGGCTCAGTTGGTtA.GAGCG.TTGGTCTCATAgcaaacatgattcaatcatagattgggcc.......................ATCCAAAG................GtCGTG.AGTTCGAGTCTCAC.CCAGGACA tRNA-Met-CAT-1-2 Sc: 80.3 >>>>>....>>>>..........<<<<..>>>>>...........................................................<<<<<.....................>>>.>>.......<<<<<...<<<<<. GCCTATTTAGTTTAAC.GGTtA.AAACC.TTAATTTCATA....................................................CATTAAAG................A.TGAG.AGTTCAATTCTCTC.TTTAGGCT tRNA-Met-CAT-2-1 Sc: 40.1 >>>>>>>..>>>>..........<<<<..>>>>>...........................................................<<<<<.....................>.>.>>.......<<<.<.<<<<<<<. AGGGTTATAGCTTAATCGGT.A.AAGCA.TACTGCTCATG....................................................ACAGTAC....TT...........A.TATG.TGTTCAAGTCACTT.TAGCCCTA tRNA-Met-CAT-4-1 Sc: 33.0 >>>>>>>..>>>>..........<<<<...>..>...........................................................<..<......................>>>.>>.......<<<<<.<<<<<<<. AGCAAGGTGGCGCAGT.GGA.A.GCGCG.GTAAGTTGATGtgagtcacgatgatacaacactttactaactaccaatcaagccgggctcataACCCGGAG................GaCGAC.GGATCGAAACTGTC.TCTTGCTA tRNA-iMet-CAT-2-1 Sc: 26.3 >>>>>>>..>>>>..........<<<<..>>>>.............................................................<<<<..>>>.........<<.<...>>>.>>.......<<<<<.<<<<<<<. AGCAATTTGGCGCAGT.GGA.A.GCGCGgTATGTCTCACTcatcaccttctctccactcaacaagtaactaattcgagaaatagccggg...CTCATAA.CCC.........GGAGGtCGCC.TGATCGAAACGGGC.AATTGCTA tRNA-iMet-CAT-1-1 Sc: 23.0 .>>>>>>..>>>>..........<<<<..>>>>>...........................................................<<<<<.....................>.>.>>.......<<<.<.<<<<<<.. AGCGGGTTAGTGTAAT.AGTaA.ACATA.TTCGGCTCATG....................................................ATCGAAAG................AtAGCGaGGTGCAAGTCCCCT.ACCCGCGT tRNA-Met-CAT-3-1 Sc: 22.7
Phe tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>.................................<<<<<................>>>>>.......<<<<<<<<<<<<. ACTTATGTAGCTTAAC.GGGtA.GAGCGAAACATTAAAA..........................TTGTTTAA...........GgTATAGGTTCAAATCTTATCATAAGTT tRNA-Phe-AAA-1-1 Sc: 44.8 >>>>>>>..>>>>..........<<<<.>>>>>.................................<<<<<................>>>>>.......<<<<<<<<<<<<. GCGGCAATAGCTCAGTTGGG.A.GAGCGTTAGACTGAAGcgaaacttcagacaccgtcattggatATCTAAAG...........GtCCTGCGTTCAATCCGCAGTTGCCGCA tRNA-Phe-GAA-1-1 Sc: 73.6 GCGGCAATAGCTCAGTTGGG.A.GAGCGTTAGACTGAAGcaaaacttcagacaccggtacggaatATCTAAAG...........GtCCTGCGTTCAATCCGCAGTTGCCGCA tRNA-Phe-GAA-1-2 Sc: 73.6 GCGGCAATAGCTCAGTTGGG.A.GAGCGTTAGACTGAAGcgaaacttcagcaaccatcacggaatATCTAAAG...........GtCCTGCGTTCAATCCGCAGTTGCCGCA tRNA-Phe-GAA-1-3 Sc: 73.6 GCTTCTGTAGCTCAAC.GGT.A.GAGCGAAACATTGAAG..........................CTGTTTAG...........GtTATAAGTTCAAATCTTATCGGGAGCA tRNA-Phe-GAA-2-1 Sc: 64.9
Pro tRNAs
>>>>>>>..>>>..........<<<.>>>>>....................................<<<<<..................>>>>>.......<<<<<.<<<<<<<. GGTCTGGTGGTCTAGTGGTA.TGATTCTCGCTTAGGGacaaccctgaagcaatagcc.........TGCGAGAG.............GtCCCGTGTTCAATCCACGG.CCAGACCC tRNA-Pro-AGG-1-1 Sc: 61.7 GGTCTGGTGGTCTAGTGGTA.TGATTCTCGCTTAGGGacaaccctgaagcaatagcc.........TGCGAGAG.............GtCCCGTGTTCAATCCACGG.CCAGACCC tRNA-Pro-AGG-1-2 Sc: 61.7 GGTCTGGTGGTCTAGTGGTA.TGATTCTCGCTTAGGGacaaccctgaagcaatagcc.........TGCGAGAG.............GtCCCGTGTTCAATCCACGG.CCAGACCC tRNA-Pro-AGG-1-3 Sc: 61.7 >>>>>.>..>>>..........<<<.>>>>>....................................<<<<<..................>>>>>.......<<<<<.<.<<<<<. GGCCATGTGGTCTAGTGGTC.TGATGTTTGCTTCGGGagattctcggatatcaaagatatcaccttTGCAAGAG.............GtCCTGGGTTCGAGTCCCAG.CTTGGCCC tRNA-Pro-CGG-1-1 Sc: 58.3 >>>>>>>..>>>..........<<<.>>>>>....................................<<<<<..................>>>>>.......<<<<<.<<<<<<<. GCCCGTGTGGTCTAGTGGTA.TGATTCGCGCTTTGGGacaatcctttgat................TGTGCGAG.............GtCCCCGGTTCAAACCCGGG.CGCGGGCC tRNA-Pro-TGG-1-1 Sc: 59.8 CAGATTATGGCCGAATGGTA.AGGTGCCCTGTTTGGG.............................ACAGGGA.CT...........A.TATGAGTTCGAATCTTAT.TGATCTGA tRNA-Pro-TGG-2-1 Sc: 39.8
SeC tRNAs
Ser tRNAs
>>>>>>>..>>>............<<<..........>>>>>...............................................................................<<<<<..>>>>.........<<<<...>>>>>.......<<<<<.<<<<<<<. GGCAAAGTGCCAGAGT.GGTtA.ATGGG.........TATGAC.TAGAA.......................................................................ATCATAT.GGCCTC.......GGCCG.CACAGGTTCGAATCCTGT.CTTTGTCG tRNA-Ser-AGA-1-1 Sc: 73.5 GGCAAAGTGCCAGAGT.GGTtA.ATGGG.........TATGAC.TAGAA.......................................................................ATCATAT.GGCTTC.......GGCCG.CGTAGGTTCAAATCCTGC.CTTTGTCG tRNA-Ser-AGA-2-1 Sc: 68.5 GGCAGAGTGCCAGAGT.GGTtA.ATGGG.........TATGAC.TAGAA.......................................................................ATCATAT.GGCTTC.......GGCCG.CATAGGTTCAAATCCTGT.CTCTGTCG tRNA-Ser-AGA-3-1 Sc: 67.1 >>>>>>>..>>>............<<<..........>>>>>...............................................................................<<<<<..>>>>.........<<<<...>>>>>.......<<<<<.<<<<<<<. GGCAACATGCCAGAGT.GGTtA.ATGGG.........TATGCC.TCGAAcgtcgctgtaggatgatttggattcctgctccgagagga................................AGCATAT.GTCTTC.......GGACG.CGCAGGTTCGAATCCTGC.TGTTGTCG tRNA-Ser-CGA-1-1 Sc: 63.8 GGCAACGTGCCAGAGT.GGTtA.ATGGG.........TACCCC.TCGAA.......................................................................AGGGTAT.GACTTC.......GGTCG.CACAGGTTCGAATCCTGT.CGTTGTCG tRNA-Ser-CGA-2-1 Sc: 61.9 >>>>.>>..>>>>..........<<<<...........>>>>...............................................................................<<<<.......................>>>>>.......<<<<<.<<.<<<<. GCCCCGTTAGCTCAGT.GGTcA.GAGCG.........CGTCATgTCTTCtttctctctcattcctaaatcctaaaatcttctttcactccgactccgttcctaaatacctaagatctt..CTGGCAAG.................A.CACTGGTTCGAATCCAGT.ACAGGGCA tRNA-Ser-CGA-3-1 Sc: 47.9 >>>>>>>..>>>............<<<..........>>>>>...............................................................................<<<<<..>>>...........<<<...>>>>>.......<<<<<.<<<<<<<. GACAAAGTGGCCGAGT.GGTtA.AGGCG.........TAACAC.TTGAAtcgtcgagta.............................................................ATGTTATGGGTT.........CGCCCtCGCAAGTTCGAATCTTGT.CTTTGTCG tRNA-Ser-TGA-1-1 Sc: 59.4 >>>>>>>..>>>>..........<<<<..........>...>...............................................................................<...<......................>>>>>.......<<<<<.<<<<<<<. TCTAAGCTGGTGTAGT.GGT...GCACA.........CAGGTC.TCGTGctggggacttgaagctatcatccctttcatgg.......................................AGGGCGTG.................G.ACTAGGTTCAATTCCTGG.GTTTAGAA tRNA-Ser-TGA-2-1 Sc: 23.6 >>>>>>>..>>>............<<<..........>>>>>...............................................................................<<<<<..>>>>.........<<<<...>>>>>.......<<<<<.<<<<<<<. GACGGGATGGCCGAGT.GGTtA.AGGCG.........ATGCCC.TGCTAgtatctagcaagag.........................................................AGGCATT.GGGTTC.......GCCCG.CGCGTGTTCGAATCACGT.TTCCGTCG tRNA-Ser-GCT-1-1 Sc: 64.9 GACGGGATGGCCGAGT.GGTtA.AGGCG.........ATGCCC.TGCTAatatctagcaagag.........................................................AGGCATT.GGGTTC.......GCCCG.CGCGTGTTCGAATCACGT.TTCCGTCG tRNA-Ser-GCT-1-2 Sc: 64.9 >>>>>>>..>>>>..........<<<<..........>>>...................................................................................<<<......................>>>>>.......<<<<<.<<<<<<<. TCCTTTGTGGCGCAATTGGTtA.GCGCGtcgtacgttCCTCCC.TGCTGtcctcgttcaaattccctcaatttgaaccacttctaacaagttgtcctgcagtgactgttaccaacagattATCAGGAG.................GcTGTAAGATCGAGACTTAC.CAAAGGAG tRNA-Ser-GCT-2-1 Sc: 31.6
Sup tRNAs
Thr tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>......................................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GCCCCGTTGGCTAAGTGGT.A.TAGCGTGTCACTAGTA...............................................................ATGACAAG...........AtCACTGGTTCGATTCCAGTACGGGGCA tRNA-Thr-AGT-1-1 Sc: 76.7 GCCCCGTTGGCTAAGTGGT.A.TAGCGTGTCACTAGTA...............................................................ATGACAAG...........AtCACTGGTTCGATTCCAGTACGGGGCA tRNA-Thr-AGT-1-2 Sc: 76.7 GCCCCGTTGGCTAAGTGGT.A.TAGCGTGTCACTAGTAatctccaaacaccacatggtgttccaaaggtgatcaccatgat....................ATGACAAG...........AtCACTGGTTCGATTCCAGTACGGGGCA tRNA-Thr-AGT-1-3 Sc: 68.2 >>>>.>>..>>>>.........<<<<.>>>>>......................................................................<<<<<................>>>>>.......<<<<<<<.<<<<. GCCCTGGTAGCACAGTGGT.A.GTGCGTGTCACTCGTAaacatgagtta....................................................ATGACAAG...........GtCGTCTGTTCGATCCAGGCCCCGGGCA tRNA-Thr-CGT-1-1 Sc: 63.1 >>>>>>>..>>>>.........<<<<.>>>>>......................................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GCCCCTATAGCTCAGTGGT.A.GAGCGTTATACTTGTAtccactgcaagatc.................................................ATATAAAG...........GtCCGTAGTTCAAACCTGCGTGGGGGCT tRNA-Thr-TGT-1-1 Sc: 69.4 >>>>.>>..>>>...........<<<.>>>>>......................................................................<<<<<................>>>>>.......<<<<<<<.<<<<. GGTCTGGTAGTGTAGGGGTgA.TCACATTCGGTTTGTAcgtatcccgtgacactagatcaaaccgaacgccactaattcctctcagtgatacaactcaacaTCCGAATA...........A.CCTGAGTTCGAATCTCAGCCTGACCT tRNA-Thr-TGT-2-1 Sc: 53.1
Trp tRNAs
>>>>>>>..>>>>........<<<<.>>.>>..........................................................<<.<<..>>.>........<.<<...>>>>>.......<<<<<<<<<<<<. GGGGGGCTGGCGCAACGGTA.GCGCGTCAGATTCCAG..................................................A.TCGGAATCTCCT.......GAAGGtTACCGGTTCAAATCCGGTGTCCCTCA tRNA-Trp-CCA-1-1 Sc: 56.8 >>>>>>>..>>>..........<<<....>............................................................<........................>>>>>.......<<<<<<<<<<<<. GGGGTGGTGGCGCAACGGGT.ACGTTACAGAC.CAGAtccagccacaaaaccttctaactccattacagtagcgcgttggattccagA.CCCAAAG................GtTGCGTGTTCAAATCACGTCCGCCTCA tRNA-Trp-CCA-2-1 Sc: 30.3
Tyr tRNAs
>>>>>>>..>>>...........<<<.>>>>>......................<<<<<................>>>>>.......<<<<<<<<<<<<. CTCCCTGTGGTGTAGTTGGCtATCACGTCGGGCTGTAActgtaacttgcaa..ACCTGAAG...........GtCACCGGCTCGATTCCGGTCGGGGAGA tRNA-Tyr-GTA-1-2 Sc: 55.0 CTCCCTGTGGTGTAGTTGGCtATCACGTCGGGCTGTAAttgtgtaacttgcaaACCTGAAG...........GtCACCGGCTCGATTCCGGTCGGGGAGA tRNA-Tyr-GTA-1-1 Sc: 54.9 CTCCTTGTGGTGTAGTTGGCtATCACGTCGGGCTGTAActgtaaattgcaa..ACCTGAAG...........GtCACCGGCTCGATTCCGGTCGGGGAGA tRNA-Tyr-GTA-2-1 Sc: 51.9
Val tRNAs
>>>>>>>..>>>.............<<<.>>>>>.....................................................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGTTCCGTGGTCTAGCTGGTtA..TGGCATCTCGTTAACA.............................................................................C.CGAGAAG...........GtCCCCGGTTCGAGCCCGGGCGGAATCA tRNA-Val-AAC-1-1 Sc: 69.8 GGTTCCGTGGTCTAGCTGGTtA..TGGCATCTCGTTAACA.............................................................................C.CGAGAAG...........GtCCCCGGTTCGAGCCCGGGCGGAATCA tRNA-Val-AAC-1-2 Sc: 69.8 GGTTCCGTGGTCTAGCTGGTtA..TGGCATCTCGTTAACA.............................................................................C.CGAGAAG...........GtCCCCGGTTCGAGCCCGGGCGGAATCA tRNA-Val-AAC-1-3 Sc: 69.8 GGTTCCGTGGTCTAGCTGGTtA..TGGCATCTCGTTAACA.............................................................................C.CGAGAAG...........GtCCCCGGTTCGAGCCCGGGCGGAATCA tRNA-Val-AAC-1-4 Sc: 69.8 >>>>>>>..>>.>...........<.<<...>>>.....................................................................................<<<..................>>>>>.......<<<<<<<<<<<<. GGTTCCATGGCTCAGTTGGTtA..GCGCG..GTA.TGTTActtcacaaatcgcatagaatcaaccagtcactaatatggaattcagtcgtactaatattcaatcgaaatattgagtaA.TGCGAAG...........GtCGAGAGTTCGACCCTCTCTGGGACCA tRNA-Val-CAC-1-1 Sc: 35.4 >>>>>>>..>>>.............<<<..>>>>.....................................................................................<<<<.................>>>>>.......<<<<<<<<<<<<. GCGGGGCTGGTGTAGT.GG.....TTGTGAGTTGTTTCAAgtccactttaaccaacgtttgaactaattccagagcagatcacgtgtcgttcacaaagctgagcaattt........C.CGACAAG...........GtCGCGAGTTCGATCCTCGCGCCCCGTA tRNA-Val-CAC-2-1 Sc: 24.5 >>>>>>>..>>>>...........<<<<.>>>>>.....................................................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GACCGTGTGGCCAAGT.GGCtA..TGGCGTTGGTTTTACAttaccaagtagaaa...............................................................C.ACCAAAG...........AtCGCAGGTTCGAACCCTGCCACGGTCA tRNA-Val-TAC-1-1 Sc: 61.4 GAGTAATTAATTCAAC.GGC.A..GAATATTTGTTTTACA.............................................................................C.ACGAAAG...........GtTAGAGGTTCAAATCCTTTATTACTCA tRNA-Val-TAC-2-1 Sc: 45.1