tRNA Gene Summary

Overview
tRNAs decoding standard 20 AA 119
Selenocysteine tRNAs (TCA) 0
Possible suppressor tRNAs (CTA,TTA,TCA) 1
tRNAs with undetermined or unknown isotypes 1
Predicted pseudogenes 11
Total tRNAs 132
Intron Summary (tRNAs with introns: 76)
Ala AGC
5
Ala CGC
1
Gly GCC
6
Gly CCC
1
Pro AGG
3
Pro CGG
1
Pro TGG
1
Thr AGT
1
Thr CGT
1
Thr TGT
2
Val CAC
2
Val TAC
1
Ser CGA
1
Ser TGA
2
Ser GCT
3
Arg TCG
2
Arg CCT
1
Arg TCT
3
Leu AAG
3
Leu CAG
2
Leu TAG
1
Leu CAA
1
Leu TAA
2
Phe GAA
3
Asn GTT
1
Lys CTT
4
Lys TTT
2
Asp GTC
2
Glu CTC
6
Glu TTC
1
His GTG
2
Ile AAT
1
Ile TAT
1
Met CAT
2
Tyr GTA
3
Cys GCA
1
Trp CCA
1
 

The codon usage of this genome was generated from protein-coding genes annotated in GenBank or RefSeq.
Number of CDS: 0
Number of Codons: 172890

Four Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
Codon Usage (Percentage)
AlaAGC
5
GGC
 
CGC
1
TGC
2
8
GCT
0
GCC
0
GCG
0
GCA
0
0%
GlyACC
 
GCC
6
CCC
2
TCC
3
11
GGT
0
GGC
0
GGG
0
GGA
0
0%
ProAGG
3
GGG
 
CGG
1
TGG
2
6
CCT
0
CCC
0
CCG
0
CCA
0
0%
ThrAGT
3
GGT
 
CGT
1
TGT
2
6
ACT
0
ACC
0
ACG
0
ACA
0
0%
ValAAC
4
GAC
 
CAC
2
TAC
2
8
GTT
0
GTC
0
GTG
0
GTA
0
0%
Six Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
Codon Usage (Percentage)
SerAGA
3
GGA
 
CGA
3
TGA
2
ACT
 
GCT
3
 
 
 
 
11
TCT
0
TCC
0
TCG
0
TCA
0
AGT
0
AGC
0
 
 
 
 
0%
ArgACG
3
GCG
 
CCG
1
TCG
2
 
 
 
 
CCT
1
TCT
4
11
CGT
0
CGC
0
CGG
0
CGA
0
 
 
 
 
AGG
0
AGA
0
0%
LeuAAG
3
GAG
 
CAG
2
TAG
1
 
 
 
 
CAA
1
TAA
3
10
CTT
0
CTC
0
CTG
0
CTA
0
 
 
 
 
TTG
0
TTA
0
0%
Two Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
Codon Usage (Percentage)
PheAAA
1
GAA
4
 
 
 
 
5
TTT
0
TTC
0
 
 
 
 
0%
AsnATT
1
GTT
4
 
 
 
 
5
AAT
0
AAC
0
 
 
 
 
0%
Lys 
 
 
 
CTT
4
TTT
3
7
 
 
 
 
AAG
0
AAA
0
0%
AspATC
 
GTC
7
 
 
 
 
7
GAT
0
GAC
0
 
 
 
 
0%
Glu 
 
 
 
CTC
7
TTC
2
9
 
 
 
 
GAG
0
GAA
0
0%
HisATG
 
GTG
3
 
 
 
 
3
CAT
0
CAC
0
 
 
 
 
0%
Gln 
 
 
 
CTG
3
TTG
1
4
 
 
 
 
CAG
0
CAA
0
0%
Two Box and Other tRNA Sets
IsotypetRNA Count by AnticodonTotal
Codon Usage (Percentage)
IleAAT
1
GAT
 
 
 
TAT
1
2
ATT
0
ATC
0
 
 
ATA
0
0%
iMet/Met 
 
 
 
CAT
2/5
 
 
7
 
 
 
 
ATG
0
 
 
0%
TyrATA
 
GTA
3
 
 
 
 
3
TAT
0
TAC
0
 
 
 
 
0%
Supres 
 
TCA
1
CTA
 
TTA
 
1
Stop 
 
TGA
0
TAG
0
TAA
0
0%
CysACA
 
GCA
2
 
 
 
 
2
TGT
0
TGC
0
 
 
 
 
0%
Trp 
 
 
 
CCA
2
 
 
2
 
 
 
 
TGG
0
 
 
0%
SelCys 
 
 
 
 
 
TCA
 
0
 
 
 
 
 
 
 
 
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