tRNA Gene Summary

Overview
High scoring set 1434
tRNAs decoding standard 20 AA 1434
Selenocysteine tRNAs (TCA) 0
Notable atypical predictions  
Anticodon/isotype mismatch 6
Unexpected anticodons 7
Non-canonical anticodon loop length 3
Other tRNA-like predictions  
Primary filter (tRNAscan-SE pseudogenes) 2508
Secondary filter (low feature scores, possible rep. element) 6339
Tertiary filter (excessive isotype copies, possible rep. element) 1548

Note: tRNA predictions in mitochondria and nuclear mitochondrial sequences (NUMTs) are not included in the current version of the database.

Intron Summary (tRNAs with introns: 139)
Leu AAG
1
Leu TAA
1
Lys CTT
3
Met CAT
79
Tyr GTA
55
Four Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
AlaAGC
10
GGC
 
CGC
40
TGC
37
87
GlyACC
 
GCC
1
CCC
 
TCC
 
1
ProAGG
54
GGG
 
CGG
30
TGG
40
124
ThrAGT
2
GGT
 
CGT
19
TGT
19
40
ValAAC
55
GAC
 
CAC
52
TAC
18
125
Six Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
SerAGA
53
GGA
 
CGA
25
TGA
26
ACT
 
GCT
53
 
 
 
 
157
ArgACG
 
GCG
 
CCG
 
TCG
 
 
 
 
 
CCT
 
TCT
26
26
LeuAAG
53
GAG
 
CAG
40
TAG
26
 
 
 
 
CAA
33
TAA
9
161
Two Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
PheAAA
 
GAA
62
 
 
 
 
62
AsnATT
 
GTT
34
 
 
 
 
34
Lys 
 
 
 
CTT
100
TTT
8
108
AspATC
 
GTC
2
 
 
 
 
2
Glu 
 
 
 
CTC
5
TTC
3
8
HisATG
 
GTG
2
 
 
 
 
2
Gln 
 
 
 
CTG
49
TTG
61
110
Two Box and Other tRNA Sets
IsotypetRNA Count by AnticodonTotal
IleAAT
83
GAT
 
CAT
 
TAT
11
94
iMet/Met 
 
 
 
CAT
61/79
 
 
140
TyrATA
 
GTA
55
 
 
 
 
55
Supres 
 
TCA
 
CTA
 
TTA
 
0
CysACA
 
GCA
47
 
 
 
 
47
Trp 
 
 
 
CCA
51
 
 
51
SelCys 
 
 
 
 
 
TCA
 
0