tRNA Gene Summary

Overview
High scoring set 1468
tRNAs decoding standard 20 AA 1468
Selenocysteine tRNAs (TCA) 0
Notable atypical predictions  
Anticodon/isotype mismatch 6
Unexpected anticodons 7
Non-canonical anticodon loop length 1
Other tRNA-like predictions  
Primary filter (tRNAscan-SE pseudogenes) 2652
Secondary filter (low feature scores, possible rep. element) 7036
Tertiary filter (excessive isotype copies, possible rep. element) 1775

Note: tRNA predictions in mitochondria and nuclear mitochondrial sequences (NUMTs) are not included in the current version of the database.

Intron Summary (tRNAs with introns: 142)
Leu AAG
1
Leu TAA
2
Lys CTT
3
Met CAT
82
Tyr GTA
54
Four Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
AlaAGC
10
GGC
 
CGC
40
TGC
39
89
GlyACC
 
GCC
2
CCC
 
TCC
 
2
ProAGG
56
GGG
 
CGG
31
TGG
40
127
ThrAGT
3
GGT
 
CGT
19
TGT
19
41
ValAAC
56
GAC
 
CAC
53
TAC
18
127
Six Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
SerAGA
55
GGA
 
CGA
25
TGA
26
ACT
 
GCT
53
 
 
 
 
159
ArgACG
 
GCG
 
CCG
 
TCG
 
 
 
 
 
CCT
 
TCT
26
26
LeuAAG
54
GAG
 
CAG
38
TAG
28
 
 
 
 
CAA
32
TAA
10
162
Two Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
PheAAA
 
GAA
63
 
 
 
 
63
AsnATT
 
GTT
40
 
 
 
 
40
Lys 
 
 
 
CTT
100
TTT
9
109
AspATC
 
GTC
3
 
 
 
 
3
Glu 
 
 
 
CTC
5
TTC
3
8
HisATG
 
GTG
2
 
 
 
 
2
Gln 
 
 
 
CTG
50
TTG
62
112
Two Box and Other tRNA Sets
IsotypetRNA Count by AnticodonTotal
IleAAT
87
GAT
 
CAT
 
TAT
11
98
iMet/Met 
 
 
 
CAT
65/82
 
 
147
TyrATA
 
GTA
54
 
 
 
 
54
Supres 
 
TCA
 
CTA
 
TTA
 
0
CysACA
 
GCA
47
 
 
 
 
47
Trp 
 
 
 
CCA
52
 
 
52
SelCys 
 
 
 
 
 
TCA
 
0