Structurally Aligned tRNAs (by Isotype & Anticodon)

Structural alignments are generated by aligning tRNA sequences against domain-specific tRNA covariance models with the use of COVE.

Ala tRNAs
>>>>>>>..>>>..........<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<. GGGCTTGTGGTTTAGTGGTA.TAATACTCCCTTAGCATGGGAGTG...........GtCCGGGGTTCGATTCCCCGCGAGTCCA tRNA-Ala-AGC-1-1 Sc: 71.4 GGGCTTGTGGTTTAGTGGTA.TAATACTCCCTTAGCATGGGAGTG...........GtCCGGGGTTCGATTCCCCGCGAGTCCA tRNA-Ala-AGC-1-2 Sc: 71.4 GGGCTTGTGGTTTAGTGGTA.TAATACTCCCTTAGCATGGGAGTG...........GtCCGGGGTTCGATTCCCCGCGAGTCCA tRNA-Ala-AGC-1-3 Sc: 71.4 GGGCGAATGGTTTAGTGGTA.TAACGCGTCTTTAGCATAGACGAG...........GtCCCGGTTTCGATTACCGGTTTGTCCA tRNA-Ala-AGC-2-1 Sc: 65.8 >>>>>>>..>>>..........<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<. GGGCGTTTGGTATAGGGGTA.TTACGCCTCATTCGCATTGAGGAG...........GtCGTGGGTTCGATTCCCACAACGTCCA tRNA-Ala-CGC-1-1 Sc: 70.4 >>>>>>>..>>>..........<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<. GGGCTTGTGGTTTAGGGGTA.TAATGTTCGCTTTGCATGCGAAAG...........GtCCGGGGTTCGATTCCCTGCGAGTCCA tRNA-Ala-TGC-1-1 Sc: 68.8 GGGCGTTTGGCATAGTGGTA.TTGCGCCTCATTTGCATTGAGGAG...........AtCGCGTGTTCGATTCGCGCAACGTCCA tRNA-Ala-TGC-2-1 Sc: 62.0
Arg tRNAs
>>>>>>>..>>>..........<<...<.>>>>>.....................................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGCCTGCTGGCCCAATGGCA.AGG...CGTCCGC.CTACGG.............................................................AGCGGAAG...........AtTGCAGGTTCGATCCCTGCGTAGGTCA tRNA-Arg-ACG-1-1 Sc: 71.3 GGCCTGCTGGCCCAATGGCA.AGG...CGTCCGC.CTACGG.............................................................AGCGGAAG...........AtTGCAGGTTCGATCCCTGCGTAGGTCA tRNA-Arg-ACG-1-2 Sc: 71.3 GGCCTGCTGGCCCAATGGCA.AGG...CGTCCGC.CTACGG.............................................................AGCGGAAG...........AtTGCAGGTTCGATCCCTGCGTAGGTCA tRNA-Arg-ACG-1-3 Sc: 71.3 GGCCTGCTGGCCCAATGGCA.AGG...CGTCCGC.CTACGG.............................................................AGCGGAAG...........AtTGCAGGTTCGATCCCTGCGTAGGTCA tRNA-Arg-ACG-1-4 Sc: 71.3 >>>>>>>..>>.>........<.<...<.>.>>>.....................................................................<<<.<................>>>>>.......<<<<<<<<<<<<. GGCTGGGTGGCGCAATGGCA.G.G...TATGGCC.CTCCTCgctccccacatcgacaagctttctctaaccctgacagcgcgtcactttccgg.........TGGTGAAG...........GtTGCGTGTTCGAGTCACGCCTCAGTCG tRNA-Arg-CCG-1-1 Sc: 29.3 >>>>>>>..>>>..........<<...<.>>>>>.....................................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGCCTGCTGGCCCAATGGCA.AGG...CGTCCGC.CTTCGA.............................................................AGCGGAAG...........AtTGCAGGTTCGACCCCTGCGTAGGTCA tRNA-Arg-TCG-1-1 Sc: 69.7 >>>>>>>..>>>>........<<<...<.>>>>>.....................................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGCTGTGTGGCTCAATGGCA.GAG...TGTTGGT.TTTCGGttatcaatgataataaatagaaaataactatttatgtcatgaggccct.............CACCAAAG...........GtTGTGGGTTCGAGTCCCATCGCGGTCG tRNA-Arg-TCG-2-1 Sc: 57.8 >>>>>>>...>>>........<<<.....>>>>>.....................................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGCCGTGTATGTCAGTGGTA.GAC...TGTTGCC.CTCCTAtacgctgttgttggaagtccactccactctctgcaggaca.....................AGGCAGAG...........GtCCTGGGTTCAAGCCCCAGCATGGTCG tRNA-Arg-CCT-1-1 Sc: 55.4 >>>>>.>...>>>........<<<.....>>>>>.....................................................................<<<<<................>>>>>.......<<<<<<.<<<<<. GGCCGTGTAAGTCAGTGGTA.GAC...AGTCACC.CTCCTAttttgctgaatagctc.............................................AGGTGGAA...........GtCCAGGGTTCAAGCCCCTGCTCGGTCG tRNA-Arg-CCT-2-1 Sc: 47.8 >>>>>>>..>>>>........<<<...<.>>>>>.....................................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGCCGCTTAACTCAATGGTA.GAG...TGTCAGA.TTTCTAcagccctccttatatgaggcattattgagtct.............................CTCTGAAG...........GtTATGGGTTCAAGTCCCATAGCGGTCT tRNA-Arg-TCT-1-1 Sc: 66.1 GCCCGGCTGACGCAATGGTA.GCG...TTATAGG.TTTCTA.............................................................CCCTATCG...........GtTGCGTGTTCGAGTCGCGCGTCGGGCT tRNA-Arg-TCT-2-1 Sc: 59.4 >>>>>>>..>>>>........<<<...<.>>>.........................................................................<<<................>>>>>.......<<<<<<<<<<<<. GGCCGCATGGCGCAACGGTA.GCGgtaTGTCATTtCTCTAActaccttatgatcattaactaattcctttcagcgtcagattccagtttctcctggaacatcC..TGAAG...........GtTATGTGTTCAAATCACATTGTGGTCA tRNA-Arg-TCT-3-1 Sc: 30.6
Asn tRNAs
>>>>>>>..>>>...........<<<.>>>>>......................................<<<<<................>>>>>.......<<<<<<<<<<<<. GTCTCTATGTCCCAGTGGTtA.AGGAGTCCGGCTGTTAtcagcatctgcgaagatgatgaccgcac...ACCGGAAG...........AtCGGTGGTTCGATCCCACCTAGGGACG tRNA-Asn-GTT-2-1 Sc: 65.6 GTCTCCGTGGTCCAGTGGTtA.CGACGTTCGGCTGTTAcgacattcgcttcagcgcatgactgact...ACCGAGAT...........AtCGGCGGTTCGATCCCGCCCGGGGACG tRNA-Asn-GTT-1-2 Sc: 62.1 GTCTCCGTGGTCCAGTGGTtA.CGACGTTCGGCTGTTAcgacatacacatctaagtgtgtatgcagactACCGAGAT...........AtCGGCGGTTCGATCCCGCCCGGGGACG tRNA-Asn-GTT-1-1 Sc: 61.9
Asp tRNAs
>>>>>>>..>>>...........<<<.>>>>>........................<<<<<...............>>>>>.......<<<<<<<<<<<<. TCCTCAGTGGTCTACCGGTcA.TGATTGGCGCTTGTCActgcgatagcagcaaccCGCGCTAG...........AACAGGGTTCGACTCCCTGCTGGGGAG tRNA-Asp-GTC-1-1 Sc: 41.3 TCCTCAGTGGTCTACCGGTcA.TGATTGGCGCTTGTCActgcaatcgcagcaaccCGCGCTAG...........AACAGGGTTCGACTCCCTGCTGGGGAG tRNA-Asp-GTC-1-2 Sc: 41.3 TCCTCAGTGGTCTACCGGTcA.TGATTGGCGCTTGTCActgcgatcgcagcaaccCGCGCTAG...........AACAGGGTTCGACTCCCTGCTGGGGAG tRNA-Asp-GTC-1-3 Sc: 41.3 TCCTCAGTGGTCTACCGGTcA.TGATTGGCGCTTGTCActgcaatcgcagcaaccCGCGCTAG...........AACAGGGTTCGACTCCCTGCTGGGGAG tRNA-Asp-GTC-1-4 Sc: 41.3
Cys tRNAs
>>>>>>>..>>>>........<<<<.>>>>>...................<<<<<................>>>>>..........<<<<<<<<<<<<. GGGGGTATAACTCAGTGGTA.GAGTGGCTGATTGCAGtacaagactaacATCAGCAA...........GtCGGGTGTTCGACC...CACTCTGCTCCCT tRNA-Cys-GCA-1-1 Sc: 46.3 >>>>>.>..>.>>........<<.<.>>>>>...................<<<<<................>>>>>..........<<<<<<.<<<<<. GGACGGATAAGTCAGCGGTA.GAGTGTTTGATTGCAG............ATCGAACA...........GtCCCTGGTTC.......CCGGGTACGTCCT tRNA-Cys-GCA-2-1 Sc: 20.5
Gln tRNAs
>>>>>>>..>>>...........<<<.>>>>>......................................<<<<<...............>>>>>.......<<<<<<<<<<<<. GGCTTCTTAGTCTAATGGTtA.TGACATCGGATTCTGA...............................TTCCGGGG...........GTCAGGGTTCGATTCCCTGAGAGGCCT tRNA-Gln-CTG-1-1 Sc: 69.2 >>>>>>>..>>>>.........<<<<.>>>>>......................................<<<<<...............>>>>>.......<<<<<<<<<<<<. GGTTCTATAGTGTAATGGTtA.GCACGGTGATTTCTGA...............................TGTCGCAA...........ATTTGGGTTCGATTCCCAATAGGACCT tRNA-Gln-CTG-2-1 Sc: 44.7 >>>>>>>..>>>>.........<<<<.>>>>>......................................<<<<<...............>>>>>.......<<<<<<<<<<<<. GGCCTCTTAGTCTAGTGGTtA.GGACACTCGACTTTGActtagtgttgagtttaaactccactttcatcCTCGAGAG...........ACACGAGCTCGAATCTCGTAGGGGCCT tRNA-Gln-TTG-1-1 Sc: 58.5 GGTTCTATAGTGTAACGGTtA.GCACGGTGATTTTTGA...............................TGTCGCAA...........ATTTGGGTTCGATTCCCAATAGGACCT tRNA-Gln-TTG-2-1 Sc: 42.3
Glu tRNAs
>>>>>>>..>>>>..........<<<<.>>>>>......................<<<<<...............>>>>>.......<<<<<<<<<<<<. TCCGATATGGTGTAAC.GGT.A.ACATCGCCGTCTCTCAttagaaagacacgatCACGGCAG...........CTCGGGGTTCGATTCCCCGTGTCGGAG tRNA-Glu-CTC-1-1 Sc: 45.1 TCCGATATGGTGTAAC.GGT.A.ACATCGCCGTCTCTCAttagaaagacacgatCACGGCAG...........CTCGGGGTTCGATTCCCCGTGTCGGAG tRNA-Glu-CTC-1-2 Sc: 45.1 TCCGATATGGTGTAAC.GGT.A.ACATCGCCGTCTCTCAttagaaagacacgatCACGGCAG...........CTCGGGGTTCGATTCCCCGTGTCGGAG tRNA-Glu-CTC-1-3 Sc: 45.1 >>>>>>>..>>>>..........<<<<.>>>>>......................<<<<<...............>>>>>.......<<<<<<<<<<<<. TCCGATATGGTGTAAC.GGT.A.ACATCGCCCTCTTTCA...............CAGGGCAG...........CTCGGGGTTCGATTCCCCGTGTCGGAG tRNA-Glu-TTC-2-1 Sc: 49.2 TCCGATATGGTGTAAT.GGCtA.ACATCGCCCTCTTTCA...............CAGGGCAG...........CTCGGGGTTCGATTCCCCGTATCGGAG tRNA-Glu-TTC-1-1 Sc: 48.7 TCCGATATGGTGTAAT.GGCtA.ACATCGCCCTCTTTCA...............CAGGGCAG...........CTCGGGGTTCGATTCCCCGTATCGGAG tRNA-Glu-TTC-1-2 Sc: 48.7 .>>>>>>..>>>............<<<..>>>>......................<<<<................>>>>>.......<<<<<<<<<<<.. CATCCAATGGTCAAGTCGGTtA.AGACATAACATTTTCA...............CTGTTTGG...........ACGAGAGTTCGAATCTCTCTTGGATAA tRNA-Glu-TTC-3-1 Sc: 45.8
Gly tRNAs
>>>>>>>..>>.>........<.<<.>>>>>.......................................<<<<<...............>>>>>.......<<<<<<<<<<<<. GCATCATTGGTCTAGTGGTA.GAATTCATCGTTGCCA................................TCGATGAG...........GCCCGTGTTCGATTCACGGATGATGCA tRNA-Gly-GCC-1-1 Sc: 60.1 GCATCATTGGTCTAGTGGTA.GAATTCATCGTTGCCA................................TCGATGAG...........GCCCGTGTTCGATTCACGGATGATGCA tRNA-Gly-GCC-1-2 Sc: 60.1 GCATCATTGGTCTAGTGGTA.GAATTCATCGTTGCCA................................TCGATGAG...........GCCCGTGTTCGATTCACGGATGATGCA tRNA-Gly-GCC-1-3 Sc: 60.1 GCATCATTGGTCTAGTGGTA.GAATTCATCGTTGCCA................................TCGATGAG...........GCCCGTGTTCGATTCACGGATGATGCA tRNA-Gly-GCC-1-4 Sc: 60.1 >>>>>>>..>>>..........<<<.>>>>>.......................................<<<<<...............>>>>>.......<<<<<<<<<<<<. GCTGTCGTGGTCCAAGGGTA.TGATACGATCCTCCCAttgcttaagctgtcttgtgagcatattcggacAGATCGTG...........ACCCGGGTTCGAGTCCCGGCGACAGCA tRNA-Gly-CCC-1-1 Sc: 52.7
His tRNAs
>>>>>>>..>>>>............<<<<.>>>>>....................<<<<<...............>>>>>.......<<<<<<<<<<<<. GCGGTGATAGTCTAGTTGGTc..A.GGACGTATCGTTGTGGcatcatctacgatCCGATAAG...........ACCTGAGTTCGAATCTCAGTCACCGCA tRNA-His-GTG-1-1 Sc: 65.9 GCGGTAATAGTATAGT.GGTcttA.GTACAGTTCGTTGTGGaattacatct...CCGAACAA...........ACCCCTGTTCGATTCAGGGTTACCGCA tRNA-His-GTG-2-1 Sc: 44.5
Ile tRNAs
>>>>>>>..>>>>...........<<<<.>>>>>.................................................................<<<<<.......................>>>>>..........<<<<<.<<<<<<<. GGTCGCTTAGATCAGTTGGTt.A.GATCGTGGTGCTAATAtagactcgcctattgaagcagtc...................................ACGCCAAG..................GtCAAGGGTTCGACC...CCCTT.AGTGACCA tRNA-Ile-AAT-1-1 Sc: 63.9 >>>>>.>..>>>>...........<<<<.>>>>>.................................................................<<<<<.......................>>>>>..........<<<<<.<.<<<<<. GGACTTATAACTCAGTTGGTt.A.GAGTGTCGTACTAATAtcagcttgcttagcaagttagttgttggta............................ATGCGAAA..................GtCCACAGTTCGAGC...CTGTG.TTGGTCCA tRNA-Ile-AAT-2-1 Sc: 56.4 GGACTTATAACTCAGTTGGTt.A.GAGTGTCGTACTAATAtcagcttgcttagcaagttagttgttggta............................ATGCGAAA..................GtCCACAGTTCGAGC...CTGTG.TTGGTCCA tRNA-Ile-AAT-2-2 Sc: 56.4 GGACTTATAACTCAGTTGGTt.A.GAGTGTCGTACTAATAtcagcttgcttagcaagttagttgttggta............................ATGCGAAA..................GtCCACAGTTCGAGC...CTGTG.TTGGTCCA tRNA-Ile-AAT-2-3 Sc: 56.4 >>>>>>>..>>>>...........<<<<.>>>>>.................................................................<<<<<.......................>>>>>..........<<<<<.<<<<<<<. GGACGGATAGCTCAGTTGGTt.A.GAGCACCGTGCTTATGggatagctcttcaatttgaattgtattctatgtgtct.....................CCACGGGG..................GtCGGGAGTTCAACT...CTCCC.TTCGTCCA tRNA-Ile-TAT-1-1 Sc: 60.5 GCATTATTGGTCCAGT.GGTt.A.GGATCCTTCTCGTATGttacccattttgcttttcctttcattttcacttaactaatatcctacagttcca....AAGAAGGG..................G.CCCGCGTTCGATT...CGCGG.ATAATGCA tRNA-Ile-TAT-3-1 Sc: 47.1 GCATTATTGGTCCAGT.GGTt.A.GGATCCTTCTCGTATGattaccacgaatctttccttgatgtatttctttactaatgttctacagttcca.....AAGAAGGG..................G.CCCGCGTTCGATT...CGCGG.ATAATGCA tRNA-Ile-TAT-3-2 Sc: 47.1 GCATTATTGGTCCAGT.GGTt.A.GGATCCTTCTCGTATGattaccactaatctttccttgatgtatttctttactaatgttctacagttcca.....AAGAAGGG..................G.CCCGCGTTCGATT...CGCGG.ATAATGCA tRNA-Ile-TAT-3-3 Sc: 47.1 >>>>>>>..>>>.............<<<.>>.>>.................................................................<<.<<..>>>>..........<<<<...>>>>>..........<<<<<.<<<<<<<. GGCAAGGTGGCAGAGT.GGTctA.ATGCGTACGTTTTATCttgttctatcacttccctttcttcaaaatactaattcatttctacaggctagactagaAATCTAG.TTCCTTC.......GGGAG.CGTGTGTTCAAAT...CACAC.CCTTGTCG tRNA-Ile-TAT-4-1 Sc: 36.8 >>>>>.>..>.>>...........<<.<.>>>>>.................................................................<<<<<.......................>>>>>..........<<<<<.<.<<<<<. GCTCGTGTAGTTCAGTCGGTt.A.GATCGTCGTGCTTATGcaatattttcatgctgaatgactctattagtatcataaa...................TCACGAAT..................GtCCATGGTTC.......CCATG.CTCGAGCA tRNA-Ile-TAT-2-1 Sc: 27.6
Leu tRNAs
>>>>>>>..>>>.............<<<.>>>>>....................................................................<<<<<..>>............<<...>>>>>...........<<<<<.<<<<<<<. GGCAAGATGGCCGAGC.GGTctA.AGGCGCTAGCTTAAGGtaccaatcacatccacgatggacatt...................................CGCTAGT.CCGA........AAGGG.CGTGGGTTCGAAT....CCCAC.TCTTGTCA tRNA-Leu-AAG-1-1 Sc: 62.4 >>>>>>>..>>>>...........<<<<.>>>>>....................................................................<<<<<.....................>>>...............<<<.<<<<<<<. GGACGTATAGCTCAGTTGGTt.A.GAGCGCCATGCTGAGGggatagctattcaaatttgaactgtattctatattata.......................ACATGGAT................GtCAAG......AGT....T.CTT.TACGTCCA tRNA-Leu-GAG-1-1 Sc: 23.0 >>>>>>>..>>>.............<<<.>>>>>....................................................................<<<<<..>>............<<...>>>>>...........<<<<<.<<<<<<<. GGCAAGATGGCCGAGC.GGTctA.AGGCGCTAGTTTTAGGcatttccagtcttctgattggataaatcgata.............................CACTAGT.TCGA........AAGAG.CGTGGGTTCGAAT....CCCAC.TCTTGTCA tRNA-Leu-TAG-1-1 Sc: 57.5 >>>>>>>..>>>.............<<<.>>>>......................................................................<<<<..>>>..........<<<...>>>>>...........<<<<<.<<<<<<<. GGCAAGATGGCCGAGC.GGTctA.AGGCGCCGCATTCAAGggaaatttcccttatagggggttcactctctataatatatatatatatatatatatgta..TCGCGGT.CTCGC......AAGAGG.CGGGGGTTCGAAT....CCCCC.TCTTGTCA tRNA-Leu-CAA-1-2 Sc: 54.9 GGCAAGATGGCCGAGC.GGTctA.AGGCGCCGCATTCAAGatttccttatagggggttcactctctataatttaataaatatatatatatatatatatgtaTCGCGGT.CTCGC......AAGAGG.CGGGGGTTCGAAT....CCCCC.TCTTGTCA tRNA-Leu-CAA-1-1 Sc: 54.8 >>>>>>>..>>>.............<<<.>>>>......................................................................<<<<..>>>..........<<<...>>>>>...........<<<<<.<<<<<<<. GGCGGAATGGCCGAGT.GGTctA.AGGCGGCAGATTTAAGtcacgtgatctttacgaaaaaggcaacctatgccctttttgtcgacttcacggataat...CCCTGCT.CCCGA......AAGGGG.CGCGCGTTCGAAC....CGCGC.TTCCGTCA tRNA-Leu-TAA-1-1 Sc: 49.0
Lys tRNAs
>>>>>>>...>>>.........<<<..>>>>>....................................<<<<<................>>>>>.......<<<<<<<<<<<<. GCCCGGTTATCTCAATCGGTA.GAGTGTCAGACTCTTAtcatctgaggcatcatcttcagca.....ATCTGAAC...........GtTGCGGGTTCGAGTCCCGCATCGGGCT tRNA-Lys-CTT-2-1 Sc: 65.7 GCCCGGTTATCTCAATCGGTA.GAGTGTCAGACTCTTAtcatctgaggcatcatcttcagca.....ATCTGAAC...........GtTGCGGGTTCGAGTCCCGCATCGGGCT tRNA-Lys-CTT-2-2 Sc: 65.7 GCCTGGTTATCTCAATCGGTA.GAGTGTCAGACTCTTAtctttcgaggc..................ATCTGAAC...........GtTGCGGGTTCGAGCCCCGCATCGGGCT tRNA-Lys-CTT-1-1 Sc: 64.4 GCCTGGTTATCTCAATCGGTA.GAGTGTCAGACTCTTAtctatcgaggc..................ATCTGAAC...........GtTGCGGGTTCGAGCCCCGCATCGGGCT tRNA-Lys-CTT-1-2 Sc: 64.4 >>>>>>>...>>>.........<<<..>>>>>....................................<<<<<................>>>>>.......<<<<<<<<<<<<. GCCCGGTTATCTCAAT.GGTA.GAGTGTCAGACTTTTAtaccattgtaaaatctgaatgatttggtcATCTGAAT...........GtTGTGGGTTCGAGCCCCACATCGGGCG tRNA-Lys-TTT-1-1 Sc: 65.8
Met tRNAs
>>>>>>>..>>>............<<<.>>>>......................................................................<<<<..................>>>>>.......<<<<<..<<<<<<<. GTCTCCATGGTCTAGTGGTt.A.TGACGTCGGTCTCATActacgtatgatcaattgtaaacaattgagta..............................ATCCGGAA..............AGCTGAGTTCGATTCTCAG..TGGGGACA tRNA-Met-CAT-1-1 Sc: 61.1 GTCTCCATGGTCTAGTGGTtcA.TGACGTCGGTCTCATAtcgcgtatgatcaattgtaaacaattgggct..............................ATCCGGAA..............AGCTGAGTTCGATTCTCAG..TGGGGACA tRNA-Met-CAT-2-1 Sc: 59.5 >>>>>>>..>>>>..........<<<<...>>>....................................................................<<<....................>>>>>.......<<<<<..<<<<<<<. AGCATGTTAGATCAGAGGA..A.GATCGCCGGGCTCATAacccggatgtgtacgttttccactttatccgcacaatcttaggaccaattgactaacaatgACCTACA...............GCCCTGGATCGAAACCAGG..ACATGCTA tRNA-Met-CAT-4-1 Sc: 34.6 >>>>>>>..>>>>..........<<<<.>.>>>....................................................................<<<.<..................>>>>>.......<<<<<..<<<<<<<. AGCACGTTAGATCAGCGGA..A.GATCGCCGGGCTCATAacccggagggtacgtctttcttcttctagtactatttcttattcaacaagactaactgtt.CTCCAGC................CTCTGGATCGAAACCAGA..ACGTGCTA tRNA-Met-CAT-3-1 Sc: 34.4 >>>>>>>..>>>>..........<<<<..>.>......................................................................<.<...................>>>>>.......<<<<<..<<<<<<<. AGCATGTTAGATCAGAGGA..A.GATCGCCAGGCTCATAacctggatgtgtaagttgcccttttcggagcatcagtatgagtcacagttaactaa.....CGCCGTCAACA...........GCCCTGGATCGAAACCAGG..ACATGCTA tRNA-Met-CAT-5-1 Sc: 33.4
Phe tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......................................<<<<<................>>>>>.......<<<<<<<<<<<<. GTGACTTTAGCTCACTTGGGAGAGCGCCAGACTGAAGtctaacttcattccgatcagaacattctgtgaATCTGGAG...........GtACTGTGTTCGATCCACAGAAGTCACA tRNA-Phe-GAA-1-1 Sc: 55.5 GTGACTTTAGCTCACTTGGGAGAGCGCCAGACTGAAGtctaacttcattccgatcagaacattctgtgaATCTGGAG...........GtACTGTGTTCGATCCACAGAAGTCACA tRNA-Phe-GAA-1-2 Sc: 55.5
Pro tRNAs
>>>>>>>..>>>...........<<<.>.>>>>................................................................................<<<<<...................>>>>>.......<<<<<<<<<<<<. GGGCTGATGGTCTAGT.GGTA.CGATAC.TCCCTTAGGG.........................................................................TGGGAGTG..............GtCCTGGGTTCGATTCCCAGTTAGCCCC tRNA-Pro-AGG-1-1 Sc: 61.8 GGGCTGATGGTCTAGT.GGTA.CGATAC.TCCCTTAGGG.........................................................................TGGGAGTG..............GtCCTGGGTTCGATTCCCAGTTAGCCCC tRNA-Pro-AGG-1-2 Sc: 61.8 GGGCTGATGGTCTAGT.GGTA.CGATAC.TCCCTTAGGG.........................................................................TGGGAGTG..............GtCCTGGGTTCGATTCCCAGTTAGCCCC tRNA-Pro-AGG-1-3 Sc: 61.8 >>>>>>>..>>>>.........<<<<.>.>>>>................................................................................<<<<<...................>>>>>.......<<<<<<<<<<<<. CCCGAGGCGGTGTAATTGGTA.GCATCCtCTGATTAGGCaacttctctattgaagggcctcttggggc............................................ATCAGGCG..............A.TCTAGGTTCAACTCCTGGCCTCGGGG tRNA-Pro-AGG-2-1 Sc: 29.0 >>>>>.>..>>>...........<<<.>.>>>>................................................................................<<<<<...................>>>>>.......<<<<<<.<<<<<. GCCCGTGTGGTCTAGG.GGTA.CGATGC.ATCCTTCGGGatttttccatctagtgacaacattagaaagaa.........................................TGGATGAG..............GtCCTGCGTTCGAATCGCAGCTCGGGCC tRNA-Pro-CGG-1-1 Sc: 44.8 >>>>>>>..>.>...........<.<.>.>>....................................................................................<<<...................>>>>>.......<<<<<<<<<<<<. GGGAATGTGGTCTAGT.GGTA.TGCTCC.AT..CTGAAGctgccatctcagctgttgctaattaaaataggtatgatacttgcttcgggagactgtcccctcttgtacaaagAGAATGCGAGTG..........GtTGAGGGTTCGATTCCCTCCATTCCCC tRNA-Pro-CGG-2-1 Sc: 25.6 >>>>>>>..>>>...........<<<.>.>>>>................................................................................<<<<<...................>>>>>.......<<<<<<<<<<<<. GCCCGGATGGTTTAGG.GGTA.TAATTC.TCGCTTTGGGttgcgataaatgcttgttctgagttcatcgaagtgcatgcatccgtcctgtataaggcctaat..........TGCGAGAG..............GtCCTGGGTTCGATTCCCAGTTCGGGCC tRNA-Pro-TGG-1-1 Sc: 64.1
SeC tRNAs
Ser tRNAs
>>>>>>>..>>>>...............<<<<.>>>>>.................................................................................................................................<<<<<..>>>>..........<<<<..>>>>>.......<<<<<...<<<<<<<. GACGTCGTGTCCGAGTGGTt.A......TGGAGAGTGATTAGAAtgtcacgtgacctgttatctagtatgatcgtggaaatatcgtggaaact.........................................................................ATCACTT.GGGTTC........GCCCGCGCATGTTCGAATCATGC...CGACGTCG tRNA-Ser-AGA-1-1 Sc: 56.8 .>>>>>>..>>>.................<<<...>>>.................................................................................................................................<<<....>>.>..........<.<<..>>>>>.......<<<<<...<<<<<<.. AGCTGGGTGGCAGAGTGGTctA......ATGCT..AGACTAGAA..........................................................................................................................ATCT..AGTTCCTTC.......GAGAGCATGTGTGTGAATCACAT...CCCAGTCG tRNA-Ser-AGA-2-1 Sc: 23.1 >>>>>>>..>>...................<<.>>.>>.................................................................................................................................<<.<<......................>>>>>.......<<<<<...<<<<<<<. GGCAAGATGGCCGAGTGGT..Acgtca.ATGCGCC.AACCCTAAccctttatgttcaatatctaaccctaaacctaataggtctaaggcgcagcactcgaaccctaaccctagcactggggagataatctactcattcgtgggcctgcggttaagatatgctgtatCTTCGGAT..................GCGTGAGTTCAAATCTCAC...TCTTGTCG tRNA-Ser-CGA-2-1 Sc: 31.6 >>>>>>>..>>>.................<<<.>.>>...................................................................................................................................<<.<..........................>.......<.......<<<<<<<. GGCAAGGTGGCGGAGTGGTt.A......ACGCGCCAGCCTCGAAgcctcgatagctggttccttcgggagcgtggtatgttctagagggcctttttgctccccgttctgacggctaacatatacaa........................................AACTAGT.........................GTTCAAATCACAC...CCTTGTCG tRNA-Ser-CGA-1-1 Sc: 29.2 >>>>>>>..>>>.................<<<...>>...................................................................................................................................<<..........................>>>.......<<<.....<<<<<<<. GGCCAGATGGCGGAGTGGTctA......ACGCGCCAGACTTGAAccaaccccaatttggttaatctggttccttcgggagcgtggtatgttacgccgaatcatatacaaagggcctttttgcttcccattcaga................................AACTAATG....TTAA..........AATAGTGTTCGAATCACAC...TCTGGTCG tRNA-Ser-TGA-1-1 Sc: 36.8
Sup tRNAs
Thr tRNAs
>>>.>>>>..>>>>........<<<<.>>>>>.........................................<<<<<................>>>>>..........<<<<<<<<<<<<. GCT.CTTATGGCTCAGTGGTA.GAGCGTGTCACTAGTA..................................ATGACAAG...........GcCCTCGGTTCGATC...CCGAGTAAGAGCA tRNA-Thr-AGT-3-1 Sc: 88.7 GCT.CCTATGGCTCAGTGGTA.GAGCGTGTCACTAGTA..................................ATGACAAA...........GtCCTCGGTTCGATC...CCGAGTAGGAGCA tRNA-Thr-AGT-1-1 Sc: 83.2 GCT.CTTATGGCTCAGTGGTA.GAGCGTGTCACTAGTA..................................ATGACAAA...........GtCCTCGGTTCGATC...CCGAGTAAGAGCA tRNA-Thr-AGT-2-1 Sc: 83.0 >>>..>>>..>>>>........<<<<.>>>>>.........................................<<<<<................>>>>>..........<<<<<<<<.<<<. GCT.CTTATGGCTCAGTGGTA.GAGCGTGTCACTAGTA..................................ATGACAAA...........GtCCTCGGTTCGATC...CCGAGTAAAAGCA tRNA-Thr-AGT-4-1 Sc: 78.2 .>>.>.>>..>>>>........<<<<.>>>>>.........................................<<<<<................>>>>>..........<<<<<<<.<<<.. ACCtCCTATGGCTCAGTGGTA.GAGCGTGTCATTAGTA..................................ATGACAAG...........GtCCTCGGTTC.......CCGAGTAAGGGCA tRNA-Thr-AGT-5-1 Sc: 44.5 >>>.>>.>..>>>>........<<<<.>>>>>.........................................<<<<<................>>>>>..........<<<<<<.<<<<<. GCC.CCCATAGCTCAGTGGTA.GAGCGTTTCACTCGTAacttatatagatattatctatataatataacgatATGAAAAG...........GtCCACTGTTCGATC...CAGTGTCGGGGCA tRNA-Thr-CGT-1-1 Sc: 66.3 >>>.>>>>..>>>>........<<<<.>>>>>.........................................<<<<<................>>>>>..........<<<<<<<<<<<<. GCC.TTTATAGCTCAGTGGTA.GAGCGTTGCACTTGTAgcctgtgacagggttgtg................ATGCAAAG...........GtCCATTGTTCAATC...CAGTGTGGAGGCA tRNA-Thr-TGT-1-1 Sc: 69.2 >>>.>>.>..>>>>........<<<<.>>>>>.........................................<<<<<................>>>>>..........<<<<<<.<<<<<. GCC.CTTGTAACTCAGTGGTA.GAGTGCATCACTTGTAacttatataatatatattatatagtatcgaa...ATGATGAA...........GtCCACTGTTCAATC...CAGTGCTGGGGCA tRNA-Thr-TGT-2-1 Sc: 55.8
Trp tRNAs
Tyr tRNAs
>>>>>>>..>>>............<<<.>>>>>...........................................<<<<<................>>>>>.......<<<<<<<<<<<<. CCCCTGATGGTGTAGTTGGTttATCACGTTCGACTGTAAtatcaaatgct.........................ATCGAAAG...........GtCCGCGGATCGACTCCGCGTCGGGGGA tRNA-Tyr-GTA-2-1 Sc: 65.4 CCCTCGGTAGTTTAGTTGGTt.ATAGCGCCAGATTGTAAcggaacgtcttctttaaaaagaaggcataacacaatATCTGGAT...........GtCGGCGGTTCGACTCCGCCCCGAGGGA tRNA-Tyr-GTA-1-1 Sc: 65.1
Val tRNAs
>>>>>>>..>>>............<<<.>.>>>......................................................<<<.<................>>>>>.......<<<<<<<<<<<<. GGCCGGTTGGTGTAGTTGGTtA.TCACGTCTGCTTAACAactaccgtactatacggtatagataa.....................CGCATAAG...........GtCGCCGGATCGAGCCCGGCACTGGTCA tRNA-Val-AAC-1-1 Sc: 62.7 >>>>>>>..>>>............<<<.>>>>>......................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGCCGGTTGGAGTAGCTGGTtA.TCTCGTATCGTTAACAtttctgtatgcgtacagtaaatta.......................CCGATAAG...........GtCGCCGGATCGAGCCCGGCACTGGTCA tRNA-Val-AAC-2-1 Sc: 53.2 GGCCGGTTGGAGTAGCTGGTtA.TCTCGTATCGTTAACAtttctgtactgtgtacagtatatta......................CCGATAAG...........GtCGCCGGATCGAGCCCGGCACTGGTCA tRNA-Val-AAC-2-2 Sc: 53.2 GGCCGGTTGGAGTAGCTGGTtA.TCTCGTATCGTTAACActtctgtattgtgtacagtatatta......................CCGATAAG...........GtCGCCGGATCGAGCCCGGCACTGGTCA tRNA-Val-AAC-2-3 Sc: 53.2 >>>>>>>..>>>............<<<.>>>>>......................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGCTGAATGGTGTAGC.GGT.A.TCACGCATCGTTCACAatagttgctggactgataaattcatccaatcgcaaagattgatcgaaCCGATGAG...........GtCCTGGGTTCGACCCCCAGTTTAGTCA tRNA-Val-CAC-1-1 Sc: 62.0 >>>>>>>..>>>>..........<<<<.>>>>>......................................................<<<<<................>>>>>.......<<<<<<<<<<<<. GGCTGGTTGGCCTAGT.GGTtA.GGGCGTATCCTTTACAagagtcctttttgcgacgtcta.........................CGGATAAG...........GtCGTGAGTTCAATCCTCACACTAGTCA tRNA-Val-TAC-1-1 Sc: 66.5