tRNA Gene Summary

Overview
High confidence set 184
tRNAs decoding standard 20 AA 183
Selenocysteine tRNAs (TCA) 1
Notable atypical predictions  
Anticodon/isotype mismatch 3
Unexpected anticodons 1
Other tRNA-like predictions  
Primary filter (tRNAscan-SE pseudogenes) 165
Secondary filter (low feature scores, possible rep. element) 67

Note: tRNA predictions in mitochondria and nuclear mitochondrial sequences (NUMTs) are not included in the current version of the database.

Intron Summary (tRNAs with introns: 17)
Arg TCT
1
Leu CAA
2
Ile TAT
1
Tyr GTA
13
Four Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
AlaAGC
15
GGC
 
CGC
3
TGC
7
25
GlyACC
 
GCC
8
CCC
4
TCC
6
18
ProAGG
5
GGG
 
CGG
2
TGG
1
8
ThrAGT
4
GGT
 
CGT
2
TGT
3
9
ValAAC
3
GAC
 
CAC
1
TAC
1
5
Six Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
SerAGA
3
GGA
 
CGA
 
TGA
 
ACT
 
GCT
5
 
 
 
 
8
ArgACG
6
GCG
 
CCG
 
TCG
2
 
 
 
 
CCT
2
TCT
3
13
LeuAAG
 
GAG
 
CAG
7
TAG
1
 
 
 
 
CAA
2
TAA
2
12
Two Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
PheAAA
 
GAA
10
 
 
 
 
10
AsnATT
 
GTT
8
 
 
 
 
8
Lys 
 
 
 
CTT
4
TTT
4
8
AspATC
 
GTC
7
 
 
 
 
7
Glu 
 
 
 
CTC
3
TTC
2
5
HisATG
 
GTG
5
 
 
 
 
5
Gln 
 
 
 
CTG
6
TTG
1
7
Two Box and Other tRNA Sets
IsotypetRNA Count by AnticodonTotal
IleAAT
5
GAT
 
CAT
 
TAT
1
6
iMet/Met 
 
 
 
CAT
3/2
 
 
5
TyrATA
 
GTA
13
 
 
 
 
13
Supres 
 
TCA
 
CTA
 
TTA
 
0
CysACA
 
GCA
8
 
 
 
 
8
Trp 
 
 
 
CCA
3
 
 
3
SelCys 
 
 
 
 
 
TCA
1
1