tRNA Gene Summary

Overview
High confidence set 425
tRNAs decoding standard 20 AA 424
Selenocysteine tRNAs (TCA) 1
Notable atypical predictions  
Anticodon/isotype mismatch 5
Non-canonical anticodon loop length 2
Other tRNA-like predictions  
Primary filter (tRNAscan-SE pseudogenes) 114
Secondary filter (low feature scores, possible rep. element) 106

Note: tRNA predictions in mitochondria and nuclear mitochondrial sequences (NUMTs) are not included in the current version of the database.

Intron Summary (tRNAs with introns: 27)
Arg TCT
8
Leu CAA
3
Leu TAA
1
Ile TAT
4
Tyr GTA
11
Four Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
AlaAGC
10
GGC
 
CGC
2
TGC
6
18
GlyACC
 
GCC
10
CCC
4
TCC
12
26
ProAGG
9
GGG
 
CGG
4
TGG
7
20
ThrAGT
23
GGT
 
CGT
11
TGT
8
42
ValAAC
9
GAC
 
CAC
15
TAC
3
27
Six Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
SerAGA
10
GGA
 
CGA
2
TGA
6
ACT
 
GCT
11
 
 
 
 
29
ArgACG
14
GCG
 
CCG
2
TCG
6
 
 
 
 
CCT
8
TCT
9
39
LeuAAG
10
GAG
 
CAG
14
TAG
5
 
 
 
 
CAA
3
TAA
3
35
Two Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
PheAAA
 
GAA
16
 
 
 
 
16
AsnATT
 
GTT
10
 
 
 
 
10
Lys 
 
 
 
CTT
16
TTT
7
23
AspATC
 
GTC
12
 
 
 
 
12
Glu 
 
 
 
CTC
13
TTC
13
26
HisATG
 
GTG
10
 
 
 
 
10
Gln 
 
 
 
CTG
17
TTG
6
23
Two Box and Other tRNA Sets
IsotypetRNA Count by AnticodonTotal
IleAAT
13
GAT
 
CAT
 
TAT
4
17
iMet/Met 
 
 
 
CAT
9/8
 
 
17
TyrATA
 
GTA
11
 
 
 
 
11
Supres 
 
TCA
 
CTA
 
TTA
 
0
CysACA
 
GCA
15
 
 
 
 
15
Trp 
 
 
 
CCA
8
 
 
8
SelCys 
 
 
 
 
 
TCA
1
1