tRNA Gene Summary

Overview
tRNAs decoding standard 20 AA 194
Selenocysteine tRNAs (TCA) 0
Possible suppressor tRNAs (CTA,TTA,TCA) 0
tRNAs with undetermined or unknown isotypes 1
Predicted pseudogenes 1
Total tRNAs 196
Intron Summary (tRNAs with introns: 143)
Ala AGC
9
Ala TGC
3
Gly GCC
11
Gly TCC
3
Pro AGG
6
Pro CGG
2
Pro TGG
2
Thr AGT
7
Val AAC
9
Val CAC
2
Val TAC
1
Ser TGA
2
Ser GCT
5
Arg ACG
7
Arg TCG
4
Arg CCT
1
Arg TCT
2
Leu AAG
6
Leu CAG
1
Leu TAG
1
Leu CAA
2
Leu TAA
1
Phe GAA
6
Lys CTT
10
Glu CTC
9
Glu TTC
3
His GTG
5
Ile AAT
9
Ile TAT
1
Met CAT
4
Tyr GTA
5
Cys GCA
1
Trp CCA
3
 

The codon usage of this genome was generated from protein-coding genes annotated in GenBank or RefSeq.
Number of CDS: 0
Number of Codons: 4352

Four Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
Codon Usage (Percentage)
AlaAGC
9
GGC
 
CGC
3
TGC
3
15
GCT
0
GCC
0
GCG
0
GCA
0
0%
GlyACC
 
GCC
12
CCC
2
TCC
3
17
GGT
0
GGC
0
GGG
0
GGA
0
0%
ProAGG
6
GGG
 
CGG
2
TGG
2
10
CCT
0
CCC
0
CCG
0
CCA
0
0%
ThrAGT
7
GGT
 
CGT
3
TGT
2
12
ACT
0
ACC
0
ACG
0
ACA
0
0%
ValAAC
9
GAC
 
CAC
2
TAC
1
12
GTT
0
GTC
0
GTG
0
GTA
0
0%
Six Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
Codon Usage (Percentage)
SerAGA
5
GGA
 
CGA
2
TGA
2
ACT
 
GCT
5
 
 
 
 
14
TCT
0
TCC
0
TCG
0
TCA
0
AGT
0
AGC
0
 
 
 
 
0%
ArgACG
7
GCG
 
CCG
2
TCG
4
 
 
 
 
CCT
2
TCT
2
17
CGT
0
CGC
0
CGG
0
CGA
0
 
 
 
 
AGG
0
AGA
0
0%
LeuAAG
6
GAG
 
CAG
1
TAG
1
 
 
 
 
CAA
2
TAA
1
11
CTT
0
CTC
0
CTG
0
CTA
0
 
 
 
 
TTG
0
TTA
0
0%
Two Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
Codon Usage (Percentage)
PheAAA
 
GAA
6
 
 
 
 
6
TTT
0
TTC
0
 
 
 
 
0%
AsnATT
 
GTT
6
 
 
 
 
6
AAT
0
AAC
0
 
 
 
 
0%
Lys 
 
 
 
CTT
10
TTT
2
12
 
 
 
 
AAG
0
AAA
0
0%
AspATC
 
GTC
9
 
 
 
 
9
GAT
0
GAC
0
 
 
 
 
0%
Glu 
 
 
 
CTC
10
TTC
3
13
 
 
 
 
GAG
0
GAA
0
0%
HisATG
 
GTG
5
 
 
 
 
5
CAT
0
CAC
0
 
 
 
 
0%
Gln 
 
 
 
CTG
5
TTG
2
7
 
 
 
 
CAG
0
CAA
0
0%
Two Box and Other tRNA Sets
IsotypetRNA Count by AnticodonTotal
Codon Usage (Percentage)
IleAAT
9
GAT
 
 
 
TAT
1
10
ATT
0
ATC
0
 
 
ATA
0
0%
iMet/Met 
 
 
 
CAT
4/4
 
 
8
 
 
 
 
ATG
0
 
 
0%
TyrATA
 
GTA
5
 
 
 
 
5
TAT
0
TAC
0
 
 
 
 
0%
Supres 
 
TCA
 
CTA
 
TTA
 
0
Stop 
 
TGA
0
TAG
0
TAA
0
0%
CysACA
 
GCA
3
 
 
 
 
3
TGT
0
TGC
0
 
 
 
 
0%
Trp 
 
 
 
CCA
3
 
 
3
 
 
 
 
TGG
0
 
 
0%
SelCys 
 
 
 
 
 
TCA
 
0
 
 
 
 
 
 
 
 
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