tRNA Gene Summary

Overview
High confidence set 297
tRNAs decoding standard 20 AA 296
Selenocysteine tRNAs (TCA) 1
Notable atypical predictions  
Anticodon/isotype mismatch 6
Unexpected anticodons 1
Other tRNA-like predictions  
Primary filter (tRNAscan-SE pseudogenes) 206
Secondary filter (low feature scores, possible rep. element) 123

Note: tRNA predictions in mitochondria and nuclear mitochondrial sequences (NUMTs) are not included in the current version of the database.

Intron Summary (tRNAs with introns: 17)
Arg TCT
3
Leu CAA
3
Ile TAT
4
Tyr GTA
7
Four Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
AlaAGC
12
GGC
 
CGC
3
TGC
3
18
GlyACC
 
GCC
12
CCC
6
TCC
6
24
ProAGG
7
GGG
 
CGG
3
TGG
4
14
ThrAGT
9
GGT
 
CGT
4
TGT
4
17
ValAAC
4
GAC
 
CAC
6
TAC
3
13
Six Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
SerAGA
8
GGA
 
CGA
3
TGA
3
ACT
 
GCT
9
 
 
 
 
23
ArgACG
6
GCG
 
CCG
3
TCG
4
 
 
 
 
CCT
4
TCT
4
21
LeuAAG
6
GAG
 
CAG
6
TAG
5
 
 
 
 
CAA
3
TAA
5
25
Two Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
PheAAA
 
GAA
5
 
 
 
 
5
AsnATT
 
GTT
13
 
 
 
 
13
Lys 
 
 
 
CTT
8
TTT
8
16
AspATC
 
GTC
9
 
 
 
 
9
Glu 
 
 
 
CTC
10
TTC
9
19
HisATG
 
GTG
7
 
 
 
 
7
Gln 
 
 
 
CTG
7
TTG
4
11
Two Box and Other tRNA Sets
IsotypetRNA Count by AnticodonTotal
IleAAT
8
GAT
 
CAT
 
TAT
4
12
iMet/Met 
 
 
 
CAT
7/5
 
 
12
TyrATA
 
GTA
7
 
 
 
 
7
Supres 
 
TCA
 
CTA
 
TTA
 
0
CysACA
 
GCA
24
 
 
 
 
24
Trp 
 
 
 
CCA
6
 
 
6
SelCys 
 
 
 
 
 
TCA
1
1