tRNA Gene Summary

Overview
tRNAs decoding standard 20 AA 157
Selenocysteine tRNAs (TCA) 0
Possible suppressor tRNAs (CTA,TTA,TCA) 0
tRNAs with undetermined or unknown isotypes 0
Predicted pseudogenes 8
Total tRNAs 165
Intron Summary (tRNAs with introns: 128)
Ala AGC
7
Ala CGC
2
Ala TGC
2
Gly GCC
8
Gly CCC
1
Pro AGG
6
Pro CGG
1
Pro TGG
2
Thr AGT
3
Thr CGT
2
Thr TGT
2
Val AAC
4
Val CAC
2
Val TAC
1
Ser AGA
3
Ser CGA
2
Ser GCT
3
Arg ACG
4
Arg CCG
2
Arg TCG
2
Arg TCT
2
Leu AAG
5
Leu CAG
3
Leu TAG
1
Leu CAA
2
Phe GAA
4
Asn GTT
2
Lys CTT
9
Lys TTT
1
Asp GTC
3
Glu CTC
8
Glu TTC
3
His GTG
2
Gln CTG
3
Gln TTG
2
Ile AAT
7
Ile TAT
1
Met CAT
3
Tyr GTA
5
Trp CCA
3

The codon usage of this genome was generated from protein-coding genes annotated in GenBank or RefSeq.
Number of CDS: 0
Number of Codons: 21462

Four Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
Codon Usage (Percentage)
AlaAGC
7
GGC
 
CGC
2
TGC
2
11
GCT
0
GCC
0
GCG
0
GCA
0
0%
GlyACC
 
GCC
9
CCC
2
TCC
3
14
GGT
0
GGC
0
GGG
0
GGA
0
0%
ProAGG
6
GGG
 
CGG
1
TGG
2
9
CCT
0
CCC
0
CCG
0
CCA
0
0%
ThrAGT
4
GGT
 
CGT
2
TGT
2
8
ACT
0
ACC
0
ACG
0
ACA
0
0%
ValAAC
6
GAC
 
CAC
2
TAC
1
9
GTT
0
GTC
0
GTG
0
GTA
0
0%
Six Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
Codon Usage (Percentage)
SerAGA
5
GGA
 
CGA
2
TGA
 
ACT
 
GCT
3
 
 
 
 
10
TCT
0
TCC
0
TCG
0
TCA
0
AGT
0
AGC
0
 
 
 
 
0%
ArgACG
7
GCG
 
CCG
2
TCG
2
 
 
 
 
CCT
1
TCT
3
15
CGT
0
CGC
0
CGG
0
CGA
0
 
 
 
 
AGG
0
AGA
0
0%
LeuAAG
5
GAG
 
CAG
3
TAG
1
 
 
 
 
CAA
2
TAA
 
11
CTT
0
CTC
0
CTG
0
CTA
0
 
 
 
 
TTG
0
TTA
0
0%
Two Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
Codon Usage (Percentage)
PheAAA
 
GAA
4
 
 
 
 
4
TTT
0
TTC
0
 
 
 
 
0%
AsnATT
 
GTT
7
 
 
 
 
7
AAT
0
AAC
0
 
 
 
 
0%
Lys 
 
 
 
CTT
9
TTT
2
11
 
 
 
 
AAG
0
AAA
0
0%
AspATC
 
GTC
6
 
 
 
 
6
GAT
0
GAC
0
 
 
 
 
0%
Glu 
 
 
 
CTC
9
TTC
4
13
 
 
 
 
GAG
0
GAA
0
0%
HisATG
 
GTG
3
 
 
 
 
3
CAT
0
CAC
0
 
 
 
 
0%
Gln 
 
 
 
CTG
4
TTG
2
6
 
 
 
 
CAG
0
CAA
0
0%
Two Box and Other tRNA Sets
IsotypetRNA Count by AnticodonTotal
Codon Usage (Percentage)
IleAAT
7
GAT
 
 
 
TAT
1
8
ATT
0
ATC
0
 
 
ATA
0
0%
iMet/Met 
 
 
 
CAT
4/4
 
 
8
 
 
 
 
ATG
0
 
 
0%
TyrATA
 
GTA
5
 
 
 
 
5
TAT
0
TAC
0
 
 
 
 
0%
Supres 
 
TCA
 
CTA
 
TTA
 
0
Stop 
 
TGA
0
TAG
0
TAA
0
0%
CysACA
 
GCA
3
 
 
 
 
3
TGT
0
TGC
0
 
 
 
 
0%
Trp 
 
 
 
CCA
3
 
 
3
 
 
 
 
TGG
0
 
 
0%
SelCys 
 
 
 
 
 
TCA
 
0
 
 
 
 
 
 
 
 
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