Structurally Aligned tRNAs (by Isotype & Anticodon)

Structural alignments are generated by aligning tRNA sequences against domain-specific tRNA covariance models with the use of COVE.

Ala tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<. GGGGAGTTAGCTCAGTGGTA.GAGCGTTTGCTTAGCATGTAAGAG...........GtCGCGAGTTCAATCCTCGTACTCTCCA tRNA-Ala-AGC-1-1 Sc: 71.8 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<. GGGGAATTATCTCAGTGGTA.GAGAGTAAGATCCGCAATCTTGAG...........A.CCCGGGTTCGACTCCCGGATTCTCCA tRNA-Ala-CGC-1-1 Sc: 67.9 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<. GGGGCTATAGCTCAGTGGTA.GAGCGCTTGCTTTGCATGTAAGAG...........GcCATGGGTTCGAATCCTGTTAGCTCCA tRNA-Ala-TGC-1-1 Sc: 71.4
Arg tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<. GGATCCGTAGCTTAATGGC.A.AAGCGTTGGTCTACGGAACCAAAG...........AcTGCGGGTTCGATCCCCGCCGGATTCG tRNA-Arg-ACG-1-1 Sc: 70.4 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<. GGATGCGTAGCGCAATGGT.A.GCGCAACGGTCTTCGGAACCGTTG...........GtTGCGGGTTCGAGTCCCGTCGCATTCG tRNA-Arg-TCG-1-1 Sc: 71.7 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<. GTCCGAGTGGCCTAATGGC.A.AGGCGTAGCTCTCCTAAAGCTGAG...........AtTGCGGGTTCGAGTCCCGTCTCGGACG tRNA-Arg-CCT-1-1 Sc: 63.7 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<. TCTCTCGTAGCGTAATGGCtA.ACGCGTCTGCCTTCTAAGCAGAAG...........AcTGCGGGTTCGAGTCCCGCCGAGGGAG tRNA-Arg-TCT-1-1 Sc: 70.9
Asn tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<. GGTTCGGTGGCGCAATCGGTtAGCGCGTTCGGCTGTTAACCGAAAG...........GtTCTGAGTTCAAGTCTCAGCCGAACCG tRNA-Asn-GTT-1-1 Sc: 81.4 GGTTCAATGGCGCAATCGGTtAGCGCGTTCGGCTGTTAACCGAAAG...........GtTCTGAGTTCAAGTCTCAGTTGAACCG tRNA-Asn-GTT-2-1 Sc: 79.8
Asp tRNAs
>>>>>>>..>>>...........<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<. TCTCCGATGGTGCAGTGGTtA.ACATATCAGCCTGTCACGCTGGGG...........ACCCGAGTTCAATTCTCGGTCGGAGAG tRNA-Asp-GTC-1-1 Sc: 67.7 TCTCCGATGGTGCAGTGGTtA.ACATATCAGCCTGTCACGCTGGGG...........ACCCGAGTTCAATTCTCGGTCGGAGAG tRNA-Asp-GTC-1-2 Sc: 67.7
Cys tRNAs
>>>>>>>..>>>>........<<<<..>>>>.......<<<<.................>>>>>.......<<<<<<<<<<<<. GGGTGTATAGCTCAGTGGTA.GAGCCTTCGGCTGCAACCCGATAT...........GtCGCAGGTTCGATCCCTGCTGCACCCT tRNA-Cys-GCA-1-1 Sc: 67.3
Gln tRNAs
>>>>>>>..>>>>.........<<<<.>>>>.........<<<<...............>>>>>.......<<<<<<<<<<<<. GGTTCTATAGTGTAATGGCtA.GCACATCGGTCTCTGAATCCGGTA...........ATCTGAGTTCGAATCTCGGTAGAACCA tRNA-Gln-CTG-1-1 Sc: 57.6 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<. GGTTTTGTGGTGTAGCGGT.A.GCACTCTGGACTTTGAATCCAGCA...........ACCCGAGTTCGAACCTCGGCAGAACCA tRNA-Gln-TTG-1-1 Sc: 69.8
Glu tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<. TCCCTGATGGTCCAGTGGTtA.GGATATCTGCCTCTCACGCAGGTG...........GCCTGGGTTCGATTCCCGGTCGGGGAA tRNA-Glu-CTC-1-1 Sc: 76.3 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<. TCCCGGTTGGTCCAGTGGTtA.GGATCCCAGATTTTCACTCTGGGG...........GCCGGGGTTCGATTCCCCGACTGGGAA tRNA-Glu-TTC-1-1 Sc: 73.4
Gly tRNAs
>>>>>>>..>>>..........<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<. GCGTCATTGGTTTAGTGGTA.TAATGGCGGGTTGCCATCCTGTCG...........ACACGGGTTCGATTCCCGTATGACGCA tRNA-Gly-GCC-1-1 Sc: 65.5 >>>>>>>...>>..........<<..>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<. GCGTTAGTGTTCTAATGGTA.TGATTTTAGCCTTCCAAGCTGACG...........GCCCGGGTTCGATTCCCGGCTAACGCA tRNA-Gly-TCC-1-1 Sc: 64.9 GCGTTAGTGTTCTAATGGTA.TGATTTTAGCCTTCCAAGCTGACG...........GCCTGGGTTCGATTCCCAGCTAACGCA tRNA-Gly-TCC-2-1 Sc: 64.4
His tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<. GCGAGCATAGCTTAGGGGTA.GAGCATCACGTTGTGGCCGTGAAG...........ACACGGGTTCGATTCCCGTTGTTCGCA tRNA-His-GTG-1-1 Sc: 69.9
Ile tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>......................................<<<<<................>>>>>.......<<<<<<<<<<<<. GCTCTGATAGCTCAGTTGGTtAGAGCGTCGTGCTAATA...............................ACGCGAAG...........GtCCGGGGTTCGAACCCCCGTCGGAGCA tRNA-Ile-AAT-1-1 Sc: 87.4 >>>>>.>..>>>>.........<<<<.>>>>>......................................<<<<<................>>>>>.......<<<<<<.<<<<<. GCTCCTGTAACTCAGTCGGTcAGAGTGTGGTACTTATAagctgaaaggctatggttcattggctaagtaATGCCAAA...........GtCGCGAGTTCGAATCTCGCCTGGAGCA tRNA-Ile-TAT-1-1 Sc: 67.3
Leu tRNAs
>>>>>>>..>>>............<<<.>>>>>.......<<<<<..>>.>..........<.<<...>>>>>.......<<<<<.<<<<<<<. GGTTGGATGGCCGAGCGGTctA.AGGCGCTGGTTTAAGGGACCAGTGTGGC..........GACACtCGCGGGTTCGAATCCCGC.TCCAATCA tRNA-Leu-AAG-1-1 Sc: 62.3 >>>>>>>..>>>............<<<.>>>>>.......<<<<<..>>>>..........<<<<...>>>>>.......<<<<<.<<<<<<<. GACAGGATGGCCGAGTGGTctA.AGGCGCCACATTCAGGTTGTGGT.CCTCCTAT......GAGGG.CGCGGGTTCGAATCCCGT.TTCTGTCA tRNA-Leu-CAG-1-1 Sc: 72.3 >>>>>>>..>>>............<<<.>>>>>.......<<<<<..>>.>..........<.<<...>>>>>.......<<<<<.<<<<<<<. AGTGTGATGGCCGAGTGGTctA.AGGCGCTGGAATTAGGCTCCAGT.CAGT..........AATGG.CAGGGGTTCGAATCCCCT.TCACACTA tRNA-Leu-TAG-1-1 Sc: 60.8 >>>>>>>..>>>............<<<.>>>>>.......<<<<<..>>>>..........<<<<...>>>>>.......<<<<<.<<<<<<<. GACATCATGGCCGAGTGGTctA.AGGCGTTCGACTCAAGATCGAAT.ACGCGTAC......GCGTG.CGCGGGTTCGAATCCTGC.TGATGTCA tRNA-Leu-CAA-1-1 Sc: 77.5 >>>>>>>..>>>............<<<.>>>>>.......<<<<<..>>>>..........<<<<...>>>>>.......<<<<<.<<<<<<<. ACCACTATGGCCGAGCGGTctA.AGGCGGCAGACTTAAGATCTGTT.GTTTGTA.......AAACG.CGTGGGTTCGAATCCCAC.TGGTGGTA tRNA-Leu-TAA-1-1 Sc: 76.7
Lys tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<. ACCCGGTTAGCTCAATCGGTAGAGCATCAGACTCTTAATCTGAGG...........GcTGCGAGTTCGAGTCTCGTACTGGGTG tRNA-Lys-CTT-1-1 Sc: 74.0 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<. GCCCGGTTAGCTCAGTCGGTAGAGCATTGGACTTTTAATCCAAGG...........GcCGCGGGTTCGAGTCCCGCATCGGGTG tRNA-Lys-TTT-1-1 Sc: 87.3
Met tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<. AGCACGGTGGCGCAATGGT.A.GCGCGTTGGGCTCATAATCCAAAG...........GtTGGTGGTTCGAATCCACTCTGTGCTA tRNA-Met-CAT-1-1 Sc: 71.9 >>>.>>>..>>>>.........<<<<.>>>>.........<<<<................>>>>>.......<<<<<<<<.<<<. GCCACCATCGTATAACGGTtA.GTACGTCAGTCTCATAATCTGAAG...........A.CGCGAGTTCGACTCTCGCTGGAGGCA tRNA-Met-CAT-2-1 Sc: 56.4
Phe tRNAs
>>>>>>>..>>>>........<<<<..>>>>.......<<<<.................>>>>>.......<<<<<<<<<<<<. GCGAGATTAGCTCAGTGGAA.GAGCACCAGACTGAAGATCTGTAG...........GtCCTGGGTTCGACTCCCAGATCTCGCA tRNA-Phe-GAA-1-1 Sc: 72.5
Pro tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<. GCCGTTATAGTCCAGTGGTA.GGATTTTCGCTTAGGGTGCGAGAG...........GtCCCGGGTTCGATCCCCGGTAACGGCC tRNA-Pro-AGG-1-1 Sc: 77.7 >>>>>.>..>>>..........<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<.<<<<<. GCCGGTATGGTCCAGTGGTA.AGATATCTGTTTCGGGTACAGGTG...........A.CCCGGGTTCGATCCCCGGTTCCGGCC tRNA-Pro-CGG-1-1 Sc: 66.0 >>>>>>>..>>>..........<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<. GCCCCAATGGCTCAGTGGTA.AAGCACTCGGTTTGGGTCCGAGAG...........AtCCCGGGTTCGATCCCCGGTTGGGGCC tRNA-Pro-TGG-1-1 Sc: 78.5
SeC tRNAs
Ser tRNAs
>>>>>>>..>>>...........<<<.>>>>>.......<<<<<..>>>.........<<<...>>>>>.......<<<<<.<<<<<<<. GACAAGTTGGCCGAGTGGTtA.AGGCGTCAGTCTAGAAAACTGATACGG.TCT.....CCGTtCACAGGTTCGAATCCTGT.ACTTGTCG tRNA-Ser-AGA-1-1 Sc: 74.2 >>>>>>>..>>>...........<<<.>>>>.........<<<<..>>>.........<<<...>>>>>.......<<<<<.<<<<<<<. GACAGCGTGGCCGAGTGGTtA.AGGCGGTTGATTCGAAACCAACT.GGGTTTA....TCCCG.CATCAGTTCAAATCTGGT.CGCTGTCG tRNA-Ser-CGA-1-1 Sc: 62.0 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<..>>>.........<<<...>>>>>.......<<<<<.<<<<<<<. GTCAGCGTGGCCGAGTGGTtA.AGGCGTCAGTCTTGAAAACTGATACGG.TTC.....CCGTtCGCAGGTTCGAATCCTGT.CGCTGACG tRNA-Ser-TGA-1-1 Sc: 75.0 >>>>>>>..>>.............<<.>>>>>.......<<<<<..>>>>.......<<<<...>>>>>.......<<<<<.<<<<<<<. GATGGCGTAGCAAAGTGGTtA.ACGCGGGTGATTGCTAATCATCT.CCCGTCT....CGGGG.CGTGGGTTCGAATCCCAC.CGTCATCG tRNA-Ser-GCT-1-1 Sc: 66.0
Sup tRNAs
Thr tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<. GCCGCCATAGCTCAGTGGTtA.GAGCGTCTGTTTAGTAAACAGGAG...........GtCTCGGGTTCGATCCCCGGTGGTGGCT tRNA-Thr-AGT-1-1 Sc: 79.4 >>>>>>>..>>>>.........<<<<.>>>>.........<<<<................>>>>>.......<<<<<<<<<<<<. GGCTCTTTAGTTTAGTGGT.A.GAACGTCTGTTTCGTAATCAGAAG...........AtCACGGGTTCGACTCCCGTAAGAGCCT tRNA-Thr-CGT-1-1 Sc: 73.8 >>>>>.>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<.<<<<<. GGCGCTATAGCTCAGTGGT.A.GAGCGTTTGCCTTGTAAGCAAAAG...........GtCTCGGGTTCGATCCCCGGTCGCGCCT tRNA-Thr-TGT-1-1 Sc: 78.7
Trp tRNAs
>>>>>>>..>>>>........<<<<.>>>>.........<<<<................>>>>>.......<<<<<<<<<<<<. GACCGCATGGCGCAGTGGTA.GCGCTTCTGATTCCAGTCCAGAAG...........GtCGTCCGTTCGAATCGGGCTGCGGTCA tRNA-Trp-CCA-1-1 Sc: 66.8
Tyr tRNAs
>>>>>>>..>>>>........<<<<.>>>>>..................<<<<<................>>>>>.......<<<<<<<<<<<<. CTCTCAATAGCTCAGTGGTA.GAGCAGCTGACTGTAGaagatgtagttATCAGCGG...........GtCGCTGGTTCGACTCCGGCTTGGGAGA tRNA-Tyr-GTA-1-1 Sc: 67.7
Val tRNAs
>>>>>>>..>>>............<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<. GTTTCCTTGGTGTAGTGGTt.A.TCACGTCCGCCTAACACGCGGGAG...........GaGACGAGTTCGATCCTCGTAGGAAACA tRNA-Val-AAC-1-1 Sc: 71.4 >>>>>>>..>>>............<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<. GCATTCGTAGTGTAGTGGTt.A.TCACATACCCTTCACATGGGTAAG...........GcCCCGGGTTCGAGCCCCGGCGAGTGCA tRNA-Val-CAC-1-1 Sc: 76.4 >>>>>>>..>>>............<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<. GCGCGCTTAGTGTAGTGGCttA.TCACGTCTGCTTTACACGCAGGAG...........GgGGCCAGTTCGATCCTGGCAGTGCGCA tRNA-Val-TAC-1-1 Sc: 63.2