tRNA Gene Summary

Overview
High scoring set 3010
tRNAs decoding standard 20 AA 3009
Selenocysteine tRNAs (TCA) 1
Notable atypical predictions  
Anticodon/isotype mismatch 24
Unexpected anticodons 10
Other tRNA-like predictions  
Primary filter (tRNAscan-SE pseudogenes) 278
Secondary filter (low feature scores, possible rep. element) 234

Note: tRNA predictions in mitochondria and nuclear mitochondrial sequences (NUMTs) are not included in the current version of the database.

Intron Summary (tRNAs with introns: 345)
Arg TCT
142
Leu CAA
29
Ile TAT
37
Tyr GTA
137
Four Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
AlaAGC
61
GGC
 
CGC
31
TGC
72
164
GlyACC
 
GCC
110
CCC
154
TCC
71
335
ProAGG
62
GGG
 
CGG
29
TGG
48
139
ThrAGT
158
GGT
 
CGT
30
TGT
90
278
ValAAC
72
GAC
 
CAC
49
TAC
32
153
Six Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
SerAGA
41
GGA
 
CGA
29
TGA
29
ACT
 
GCT
90
 
 
 
 
189
ArgACG
40
GCG
 
CCG
6
TCG
43
 
 
 
 
CCT
37
TCT
143
269
LeuAAG
40
GAG
 
CAG
60
TAG
25
 
 
 
 
CAA
29
TAA
50
204
Two Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
PheAAA
 
GAA
62
 
 
 
 
62
AsnATT
 
GTT
89
 
 
 
 
89
Lys 
 
 
 
CTT
107
TTT
109
216
AspATC
 
GTC
80
 
 
 
 
80
Glu 
 
 
 
CTC
68
TTC
68
136
HisATG
 
GTG
49
 
 
 
 
49
Gln 
 
 
 
CTG
37
TTG
26
63
Two Box and Other tRNA Sets
IsotypetRNA Count by AnticodonTotal
IleAAT
75
GAT
 
CAT
 
TAT
37
112
iMet/Met 
 
 
 
CAT
137/68
 
 
205
TyrATA
 
GTA
137
 
 
 
 
137
Supres 
 
TCA
 
CTA
 
TTA
 
0
CysACA
 
GCA
88
 
 
 
 
88
Trp 
 
 
 
CCA
41
 
 
41
SelCys 
 
 
 
 
 
TCA
1
1