tRNA Gene Summary

Overview
High confidence set 771
tRNAs decoding standard 20 AA 771
Selenocysteine tRNAs (TCA) 0
Notable atypical predictions  
Anticodon/isotype mismatch 41
Unexpected anticodons 9
Other tRNA-like predictions  
Primary filter (tRNAscan-SE pseudogenes) 695
Secondary filter (low feature scores, possible rep. element) 461
Tertiary filter (excessive isotype copies, possible rep. element) 106

Note: tRNA predictions in mitochondria and nuclear mitochondrial sequences (NUMTs) are not included in the current version of the database.

Intron Summary (tRNAs with introns: 36)
Met CAT
23
Tyr GTA
13
Four Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
AlaAGC
37
GGC
 
CGC
19
TGC
11
67
GlyACC
 
GCC
32
CCC
10
TCC
11
53
ProAGG
14
GGG
 
CGG
9
TGG
16
39
ThrAGT
21
GGT
 
CGT
6
TGT
12
39
ValAAC
22
GAC
 
CAC
14
TAC
5
41
Six Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
SerAGA
13
GGA
16
CGA
7
TGA
7
ACT
 
GCT
14
 
 
 
 
57
ArgACG
13
GCG
 
CCG
6
TCG
8
 
 
 
 
CCT
10
TCT
6
43
LeuAAG
28
GAG
 
CAG
14
TAG
6
 
 
 
 
CAA
8
TAA
5
61
Two Box tRNA Sets
IsotypetRNA Count by AnticodonTotal
PheAAA
 
GAA
19
 
 
 
 
19
AsnATT
 
GTT
28
 
 
 
 
28
Lys 
 
 
 
CTT
40
TTT
9
49
AspATC
 
GTC
32
 
 
 
 
32
Glu 
 
 
 
CTC
31
TTC
14
45
HisATG
 
GTG
14
 
 
 
 
14
Gln 
 
 
 
CTG
12
TTG
15
27
Two Box and Other tRNA Sets
IsotypetRNA Count by AnticodonTotal
IleAAT
63
GAT
 
CAT
 
TAT
4
67
iMet/Met 
 
 
 
CAT
18/23
 
 
41
TyrATA
 
GTA
17
 
 
 
 
17
Supres 
 
TCA
 
CTA
 
TTA
 
0
CysACA
 
GCA
17
 
 
 
 
17
Trp 
 
 
 
CCA
15
 
 
15
SelCys 
 
 
 
 
 
TCA
 
0